RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 SHROOM2Q13796 1616 aa23.82■■□□□ 1.4
ARHGEF1-208ENST00000594417 KIAA0586Q9BVV6 1533 aa23.78■■□□□ 1.4
ARHGEF1-208ENST00000594417 NPM1P06748 294 aaKnown RBP eCLIP23.77■■□□□ 1.4
ARHGEF1-208ENST00000594417 CUL7Q14999 1698 aa23.73■■□□□ 1.39
ARHGEF1-208ENST00000594417 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
ARHGEF1-208ENST00000594417 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
ARHGEF1-208ENST00000594417 PTPRGP23470 1445 aa23.61■■□□□ 1.37
ARHGEF1-208ENST00000594417 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
ARHGEF1-208ENST00000594417 RAPGEF2Q9Y4G8 1499 aa23.58■■□□□ 1.37
ARHGEF1-208ENST00000594417 FAM69CQ0P6D2 419 aa23.58■■□□□ 1.37
ARHGEF1-208ENST00000594417 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
ARHGEF1-208ENST00000594417 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
ARHGEF1-208ENST00000594417 ADCY10Q96PN6 1610 aa23.45■■□□□ 1.34
ARHGEF1-208ENST00000594417 ABCC10Q5T3U5 1492 aa23.45■■□□□ 1.34
ARHGEF1-208ENST00000594417 MAPKBP1O60336 1514 aa23.43■■□□□ 1.34
ARHGEF1-208ENST00000594417 DISP1Q96F81 1524 aa23.39■■□□□ 1.34
ARHGEF1-208ENST00000594417 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.33
ARHGEF1-208ENST00000594417 UACAQ9BZF9 1416 aa23.38■■□□□ 1.33
ARHGEF1-208ENST00000594417 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
ARHGEF1-208ENST00000594417 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
ARHGEF1-208ENST00000594417 ABCC2Q92887 1545 aa23.35■■□□□ 1.33
ARHGEF1-208ENST00000594417 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
ARHGEF1-208ENST00000594417 UHRF1BP1LA0JNW5 1464 aa23.32■■□□□ 1.32
ARHGEF1-208ENST00000594417 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
ARHGEF1-208ENST00000594417 KIF13AQ9H1H9 1805 aa23.29■■□□□ 1.32
ARHGEF1-208ENST00000594417 ASXL2Q76L83 1435 aa23.29■■□□□ 1.32
ARHGEF1-208ENST00000594417 DIP2BQ9P265 1576 aa23.29■■□□□ 1.32
ARHGEF1-208ENST00000594417 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
ARHGEF1-208ENST00000594417 GOLGA3Q08378 1498 aa23.28■■□□□ 1.32
ARHGEF1-208ENST00000594417 KIAA0556O60303 1618 aa23.25■■□□□ 1.31
ARHGEF1-208ENST00000594417 P3H3Q8IVL6 736 aa23.23■■□□□ 1.31
ARHGEF1-208ENST00000594417 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.3
ARHGEF1-208ENST00000594417 EEA1Q15075 1411 aa23.19■■□□□ 1.3
ARHGEF1-208ENST00000594417 RANGAP1P46060 587 aaPredicted RBP23.16■■□□□ 1.3
ARHGEF1-208ENST00000594417 CTTNBP2Q8WZ74 1663 aa23.15■■□□□ 1.3
ARHGEF1-208ENST00000594417 KCNH8Q96L42 1107 aa23.14■■□□□ 1.29
ARHGEF1-208ENST00000594417 EPRSP07814 1512 aaKnown RBP23.12■■□□□ 1.29
ARHGEF1-208ENST00000594417 GLI2P10070 1586 aa23.1■■□□□ 1.29
ARHGEF1-208ENST00000594417 ARID3CA6NKF2 412 aa23.1■■□□□ 1.29
ARHGEF1-208ENST00000594417 KDM6BO15054 1643 aa23.09■■□□□ 1.29
ARHGEF1-208ENST00000594417 TSPOAP1O95153 1857 aa23.07■■□□□ 1.28
ARHGEF1-208ENST00000594417 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
ARHGEF1-208ENST00000594417 ZCCHC11Q5TAX3 1644 aaKnown RBP23.07■■□□□ 1.28
ARHGEF1-208ENST00000594417 WDR7Q9Y4E6 1490 aa23.06■■□□□ 1.28
ARHGEF1-208ENST00000594417 ABCA8O94911 1581 aa23.05■■□□□ 1.28
ARHGEF1-208ENST00000594417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF1-208ENST00000594417 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
ARHGEF1-208ENST00000594417 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
ARHGEF1-208ENST00000594417 TEX14Q8IWB6 1497 aa23.01■■□□□ 1.27
ARHGEF1-208ENST00000594417 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
ARHGEF1-208ENST00000594417 CD109Q6YHK3 1445 aa22.98■■□□□ 1.27
ARHGEF1-208ENST00000594417 ATP10BO94823 1461 aa22.95■■□□□ 1.26
ARHGEF1-208ENST00000594417 KDM4FA0A1W2PPD8 638 aa22.92■■□□□ 1.26
ARHGEF1-208ENST00000594417 MAP3K4Q9Y6R4 1608 aa22.92■■□□□ 1.26
ARHGEF1-208ENST00000594417 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
ARHGEF1-208ENST00000594417 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
ARHGEF1-208ENST00000594417 SAMD9Q5K651 1589 aa22.91■■□□□ 1.26
ARHGEF1-208ENST00000594417 PPRC1Q5VV67 1664 aaKnown RBP22.9■■□□□ 1.26
ARHGEF1-208ENST00000594417 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
ARHGEF1-208ENST00000594417 PLEKHD1A6NEE1 506 aa22.86■■□□□ 1.25
ARHGEF1-208ENST00000594417 KIF21BO75037 1637 aa22.86■■□□□ 1.25
ARHGEF1-208ENST00000594417 RAPGEF6Q8TEU7 1601 aa22.82■■□□□ 1.24
ARHGEF1-208ENST00000594417 ATP1B4Q9UN42 357 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF1-208ENST00000594417 NUP153P49790 1475 aaKnown RBP22.8■■□□□ 1.24
ARHGEF1-208ENST00000594417 EFCAB5A4FU69 1503 aa22.78■■□□□ 1.24
ARHGEF1-208ENST00000594417 CFAP43Q8NDM7 1665 aa22.78■■□□□ 1.24
ARHGEF1-208ENST00000594417 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
ARHGEF1-208ENST00000594417 ADGRL1O94910 1474 aa22.7■■□□□ 1.22
ARHGEF1-208ENST00000594417 RAPGEF3O95398 923 aa22.69■■□□□ 1.22
ARHGEF1-208ENST00000594417 ARAP3Q8WWN8 1544 aa22.68■■□□□ 1.22
ARHGEF1-208ENST00000594417 FMN1Q68DA7 1419 aa22.68■■□□□ 1.22
ARHGEF1-208ENST00000594417 ABCA9Q8IUA7 1624 aa22.68■■□□□ 1.22
ARHGEF1-208ENST00000594417 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
ARHGEF1-208ENST00000594417 NEO1Q92859 1461 aa22.65■■□□□ 1.22
ARHGEF1-208ENST00000594417 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.21
ARHGEF1-208ENST00000594417 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
ARHGEF1-208ENST00000594417 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
ARHGEF1-208ENST00000594417 ARID4BQ4LE39 1312 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF1-208ENST00000594417 FANCAO15360 1455 aa22.54■■□□□ 1.2
ARHGEF1-208ENST00000594417 DENND4BO75064 1496 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF1-208ENST00000594417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.53■■□□□ 1.2
ARHGEF1-208ENST00000594417 HECW1Q76N89 1606 aa22.51■■□□□ 1.19
ARHGEF1-208ENST00000594417 EFCAB2Q5VUJ9 269 aa22.51■■□□□ 1.19
ARHGEF1-208ENST00000594417 PLCH2O75038 1416 aa22.48■■□□□ 1.19
ARHGEF1-208ENST00000594417 CLIP1P30622 1438 aa22.47■■□□□ 1.19
ARHGEF1-208ENST00000594417 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
ARHGEF1-208ENST00000594417 TTC37Q6PGP7 1564 aa22.45■■□□□ 1.18
ARHGEF1-208ENST00000594417 SCAPERQ9BY12 1400 aa22.44■■□□□ 1.18
ARHGEF1-208ENST00000594417 CASKIN1Q8WXD9 1431 aa22.43■■□□□ 1.18
ARHGEF1-208ENST00000594417 CFAP74Q9C0B2 1584 aa22.42■■□□□ 1.18
ARHGEF1-208ENST00000594417 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
ARHGEF1-208ENST00000594417 MYT1LQ9UL68 1186 aa22.38■■□□□ 1.17
ARHGEF1-208ENST00000594417 CCDC18Q5T9S5 1454 aa22.36■■□□□ 1.17
ARHGEF1-208ENST00000594417 KIF14Q15058 1648 aa22.35■■□□□ 1.17
ARHGEF1-208ENST00000594417 MAGI2Q86UL8 1455 aa22.34■■□□□ 1.17
ARHGEF1-208ENST00000594417 POGZQ7Z3K3 1410 aa22.33■■□□□ 1.17
ARHGEF1-208ENST00000594417 MLECQ14165 292 aa22.33■■□□□ 1.17
ARHGEF1-208ENST00000594417 AFAP1Q8N556 730 aa22.33■■□□□ 1.17
ARHGEF1-208ENST00000594417 YEATS2Q9ULM3 1422 aa22.32■■□□□ 1.16
ARHGEF1-208ENST00000594417 ARHGAP5Q13017 1502 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms