RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 KIF27Q86VH2 1401 aa27.95■■■□□ 2.07
GTF2F1-203ENST00000594213 KIAA0586Q9BVV6 1533 aa27.92■■■□□ 2.06
GTF2F1-203ENST00000594213 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
GTF2F1-203ENST00000594213 NPM1P06748 294 aaKnown RBP eCLIP27.8■■■□□ 2.04
GTF2F1-203ENST00000594213 CUL7Q14999 1698 aa27.8■■■□□ 2.04
GTF2F1-203ENST00000594213 AEBP2Q6ZN18 517 aaPredicted RBP27.79■■■□□ 2.04
GTF2F1-203ENST00000594213 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
GTF2F1-203ENST00000594213 FAM69CQ0P6D2 419 aa27.77■■■□□ 2.04
GTF2F1-203ENST00000594213 KIF13AQ9H1H9 1805 aa27.76■■■□□ 2.03
GTF2F1-203ENST00000594213 MAPKBP1O60336 1514 aa27.75■■■□□ 2.03
GTF2F1-203ENST00000594213 ADCY10Q96PN6 1610 aa27.74■■■□□ 2.03
GTF2F1-203ENST00000594213 PTPRGP23470 1445 aa27.68■■■□□ 2.02
GTF2F1-203ENST00000594213 DIP2BQ9P265 1576 aa27.63■■■□□ 2.01
GTF2F1-203ENST00000594213 TNIKQ9UKE5 1360 aa27.62■■■□□ 2.01
GTF2F1-203ENST00000594213 CARMIL2Q6F5E8 1435 aa27.6■■■□□ 2.01
GTF2F1-203ENST00000594213 IQGAP2Q13576 1575 aa27.54■■■□□ 2
GTF2F1-203ENST00000594213 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
GTF2F1-203ENST00000594213 ABCC2Q92887 1545 aa27.52■■■□□ 2
GTF2F1-203ENST00000594213 DISP1Q96F81 1524 aa27.51■■□□□ 1.99
GTF2F1-203ENST00000594213 RAPGEF2Q9Y4G8 1499 aa27.51■■□□□ 1.99
GTF2F1-203ENST00000594213 UHRF1BP1LA0JNW5 1464 aa27.49■■□□□ 1.99
GTF2F1-203ENST00000594213 UACAQ9BZF9 1416 aa27.46■■□□□ 1.99
GTF2F1-203ENST00000594213 ASXL2Q76L83 1435 aa27.44■■□□□ 1.98
GTF2F1-203ENST00000594213 UGGT2Q9NYU1 1516 aa27.44■■□□□ 1.98
GTF2F1-203ENST00000594213 PLB1Q6P1J6 1458 aa27.43■■□□□ 1.98
GTF2F1-203ENST00000594213 KDM6BO15054 1643 aa27.37■■□□□ 1.97
GTF2F1-203ENST00000594213 KDM5BQ9UGL1 1544 aa27.36■■□□□ 1.97
GTF2F1-203ENST00000594213 GLI2P10070 1586 aa27.35■■□□□ 1.97
GTF2F1-203ENST00000594213 KDM4FA0A1W2PPD8 638 aa27.32■■□□□ 1.96
GTF2F1-203ENST00000594213 TSPOAP1O95153 1857 aa27.3■■□□□ 1.96
GTF2F1-203ENST00000594213 KIAA0556O60303 1618 aa27.3■■□□□ 1.96
GTF2F1-203ENST00000594213 EPRSP07814 1512 aaKnown RBP27.27■■□□□ 1.96
GTF2F1-203ENST00000594213 PRXQ9BXM0 1461 aa27.25■■□□□ 1.95
GTF2F1-203ENST00000594213 PPRC1Q5VV67 1664 aaKnown RBP27.24■■□□□ 1.95
GTF2F1-203ENST00000594213 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.95
GTF2F1-203ENST00000594213 ZCCHC11Q5TAX3 1644 aaKnown RBP27.17■■□□□ 1.94
GTF2F1-203ENST00000594213 GOLGA3Q08378 1498 aa27.17■■□□□ 1.94
GTF2F1-203ENST00000594213 WDR7Q9Y4E6 1490 aa27.13■■□□□ 1.93
GTF2F1-203ENST00000594213 MAP3K4Q9Y6R4 1608 aa27.13■■□□□ 1.93
GTF2F1-203ENST00000594213 ABCA8O94911 1581 aa27.11■■□□□ 1.93
GTF2F1-203ENST00000594213 TEX14Q8IWB6 1497 aa27.1■■□□□ 1.93
GTF2F1-203ENST00000594213 CTTNBP2Q8WZ74 1663 aa27.1■■□□□ 1.93
GTF2F1-203ENST00000594213 CSRNP3Q8WYN3 585 aa27.03■■□□□ 1.92
GTF2F1-203ENST00000594213 KCNH8Q96L42 1107 aa27.02■■□□□ 1.92
GTF2F1-203ENST00000594213 CD109Q6YHK3 1445 aa27.01■■□□□ 1.91
GTF2F1-203ENST00000594213 MAGI3Q5TCQ9 1506 aa27■■□□□ 1.91
GTF2F1-203ENST00000594213 P3H3Q8IVL6 736 aa26.97■■□□□ 1.91
GTF2F1-203ENST00000594213 ADGRL1O94910 1474 aa26.97■■□□□ 1.91
GTF2F1-203ENST00000594213 ATP10BO94823 1461 aa26.93■■□□□ 1.9
GTF2F1-203ENST00000594213 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
GTF2F1-203ENST00000594213 ARID3CA6NKF2 412 aa26.88■■□□□ 1.89
GTF2F1-203ENST00000594213 CFAP43Q8NDM7 1665 aa26.88■■□□□ 1.89
GTF2F1-203ENST00000594213 SAMD9Q5K651 1589 aa26.84■■□□□ 1.89
GTF2F1-203ENST00000594213 EEA1Q15075 1411 aa26.84■■□□□ 1.89
GTF2F1-203ENST00000594213 ARAP3Q8WWN8 1544 aa26.8■■□□□ 1.88
GTF2F1-203ENST00000594213 PHLDB1Q86UU1 1377 aa26.75■■□□□ 1.87
GTF2F1-203ENST00000594213 NUP153P49790 1475 aaKnown RBP26.73■■□□□ 1.87
GTF2F1-203ENST00000594213 RAPGEF6Q8TEU7 1601 aa26.72■■□□□ 1.87
GTF2F1-203ENST00000594213 ABCA9Q8IUA7 1624 aa26.72■■□□□ 1.87
GTF2F1-203ENST00000594213 FHOD3Q2V2M9 1422 aa26.7■■□□□ 1.86
GTF2F1-203ENST00000594213 RANGAP1P46060 587 aaPredicted RBP26.69■■□□□ 1.86
GTF2F1-203ENST00000594213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.68■■□□□ 1.86
GTF2F1-203ENST00000594213 HNRNPUL2Q1KMD3 747 aaKnown RBP26.68■■□□□ 1.86
GTF2F1-203ENST00000594213 RAPGEF3O95398 923 aa26.65■■□□□ 1.86
GTF2F1-203ENST00000594213 NEO1Q92859 1461 aa26.65■■□□□ 1.86
GTF2F1-203ENST00000594213 PLEKHD1A6NEE1 506 aa26.61■■□□□ 1.85
GTF2F1-203ENST00000594213 HECW2Q9P2P5 1572 aa26.58■■□□□ 1.85
GTF2F1-203ENST00000594213 KIF21BO75037 1637 aa26.57■■□□□ 1.84
GTF2F1-203ENST00000594213 EFCAB5A4FU69 1503 aa26.55■■□□□ 1.84
GTF2F1-203ENST00000594213 ILDR1Q86SU0 546 aaPredicted RBP26.53■■□□□ 1.84
GTF2F1-203ENST00000594213 FRMPD1Q5SYB0 1578 aa26.5■■□□□ 1.83
GTF2F1-203ENST00000594213 AKNAQ7Z591 1439 aa26.48■■□□□ 1.83
GTF2F1-203ENST00000594213 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
GTF2F1-203ENST00000594213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.46■■□□□ 1.83
GTF2F1-203ENST00000594213 DENND4BO75064 1496 aaPredicted RBP26.46■■□□□ 1.83
GTF2F1-203ENST00000594213 ADAMTSL3P82987 1691 aa26.44■■□□□ 1.82
GTF2F1-203ENST00000594213 FANCAO15360 1455 aa26.43■■□□□ 1.82
GTF2F1-203ENST00000594213 PTPRMP28827 1452 aa26.43■■□□□ 1.82
GTF2F1-203ENST00000594213 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
GTF2F1-203ENST00000594213 CDK13Q14004 1512 aaKnown RBP26.4■■□□□ 1.82
GTF2F1-203ENST00000594213 EHMT2Q96KQ7 1210 aa26.39■■□□□ 1.82
GTF2F1-203ENST00000594213 ARID4BQ4LE39 1312 aaPredicted RBP26.39■■□□□ 1.81
GTF2F1-203ENST00000594213 TTC37Q6PGP7 1564 aa26.37■■□□□ 1.81
GTF2F1-203ENST00000594213 ARHGAP35Q9NRY4 1499 aa26.37■■□□□ 1.81
GTF2F1-203ENST00000594213 FMN1Q68DA7 1419 aa26.37■■□□□ 1.81
GTF2F1-203ENST00000594213 PLCH2O75038 1416 aa26.36■■□□□ 1.81
GTF2F1-203ENST00000594213 ARHGEF40Q8TER5 1519 aa26.34■■□□□ 1.81
GTF2F1-203ENST00000594213 BCORL1Q5H9F3 1711 aa26.34■■□□□ 1.81
GTF2F1-203ENST00000594213 RICTORQ6R327 1708 aa26.34■■□□□ 1.81
GTF2F1-203ENST00000594213 ZMYM4Q5VZL5 1548 aa26.31■■□□□ 1.8
GTF2F1-203ENST00000594213 CFAP74Q9C0B2 1584 aa26.31■■□□□ 1.8
GTF2F1-203ENST00000594213 ATP1B4Q9UN42 357 aaPredicted RBP26.3■■□□□ 1.8
GTF2F1-203ENST00000594213 YEATS2Q9ULM3 1422 aa26.3■■□□□ 1.8
GTF2F1-203ENST00000594213 SCAPERQ9BY12 1400 aa26.29■■□□□ 1.8
GTF2F1-203ENST00000594213 MAGI2Q86UL8 1455 aa26.29■■□□□ 1.8
GTF2F1-203ENST00000594213 CDK11AQ9UQ88 783 aaPredicted RBP26.27■■□□□ 1.8
GTF2F1-203ENST00000594213 MADDQ8WXG6 1647 aa26.27■■□□□ 1.8
GTF2F1-203ENST00000594213 EFCAB2Q5VUJ9 269 aa26.26■■□□□ 1.79
GTF2F1-203ENST00000594213 POGZQ7Z3K3 1410 aa26.25■■□□□ 1.79
GTF2F1-203ENST00000594213 HECW1Q76N89 1606 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms