RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 PRG4Q92954 1404 aaPredicted RBP33.95■■■■□ 3.02
COPE-204ENST00000593827 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
COPE-204ENST00000593827 ERCC6L2Q5T890 1561 aa33.86■■■■□ 3.01
COPE-204ENST00000593827 RAPGEF2Q9Y4G8 1499 aa33.84■■■■□ 3.01
COPE-204ENST00000593827 TRHP20396 242 aaPredicted RBP33.79■■■■□ 3
COPE-204ENST00000593827 CARMIL2Q6F5E8 1435 aa33.7■■■□□ 2.98
COPE-204ENST00000593827 IQGAP2Q13576 1575 aa33.67■■■□□ 2.98
COPE-204ENST00000593827 EEA1Q15075 1411 aa33.63■■■□□ 2.97
COPE-204ENST00000593827 PRXQ9BXM0 1461 aa33.61■■■□□ 2.97
COPE-204ENST00000593827 CSRNP3Q8WYN3 585 aa33.59■■■□□ 2.97
COPE-204ENST00000593827 NPM1P06748 294 aaKnown RBP eCLIP33.58■■■□□ 2.97
COPE-204ENST00000593827 PTPRGP23470 1445 aa33.55■■■□□ 2.96
COPE-204ENST00000593827 TNIKQ9UKE5 1360 aa33.55■■■□□ 2.96
COPE-204ENST00000593827 UGGT2Q9NYU1 1516 aa33.48■■■□□ 2.95
COPE-204ENST00000593827 CHIC1Q5VXU3 224 aa33.46■■■□□ 2.95
COPE-204ENST00000593827 DISP1Q96F81 1524 aa33.42■■■□□ 2.94
COPE-204ENST00000593827 TTBK1Q5TCY1 1321 aaPredicted RBP33.41■■■□□ 2.94
COPE-204ENST00000593827 GOLGA3Q08378 1498 aa33.39■■■□□ 2.94
COPE-204ENST00000593827 CTTNBP2Q8WZ74 1663 aa33.37■■■□□ 2.93
COPE-204ENST00000593827 ADCY10Q96PN6 1610 aa33.35■■■□□ 2.93
COPE-204ENST00000593827 FAM9AQ8IZU1 332 aaPredicted RBP33.33■■■□□ 2.93
COPE-204ENST00000593827 KIAA0556O60303 1618 aa33.31■■■□□ 2.92
COPE-204ENST00000593827 MAPKBP1O60336 1514 aa33.3■■■□□ 2.92
COPE-204ENST00000593827 UACAQ9BZF9 1416 aa33.29■■■□□ 2.92
COPE-204ENST00000593827 UHRF1BP1LA0JNW5 1464 aa33.27■■■□□ 2.92
COPE-204ENST00000593827 ABCC2Q92887 1545 aa33.25■■■□□ 2.91
COPE-204ENST00000593827 ABCC10Q5T3U5 1492 aa33.19■■■□□ 2.9
COPE-204ENST00000593827 FAM69CQ0P6D2 419 aa33.18■■■□□ 2.9
COPE-204ENST00000593827 KIF21BO75037 1637 aa33.14■■■□□ 2.9
COPE-204ENST00000593827 PLB1Q6P1J6 1458 aa33.11■■■□□ 2.89
COPE-204ENST00000593827 KDM5BQ9UGL1 1544 aa33.08■■■□□ 2.89
COPE-204ENST00000593827 ASXL2Q76L83 1435 aa33.05■■■□□ 2.88
COPE-204ENST00000593827 DIP2BQ9P265 1576 aa33.04■■■□□ 2.88
COPE-204ENST00000593827 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
COPE-204ENST00000593827 P3H3Q8IVL6 736 aa33.03■■■□□ 2.88
COPE-204ENST00000593827 KIF13AQ9H1H9 1805 aa33.02■■■□□ 2.88
COPE-204ENST00000593827 UBTFP17480 764 aaKnown RBP33.01■■■□□ 2.87
COPE-204ENST00000593827 SAMD9Q5K651 1589 aa32.98■■■□□ 2.87
COPE-204ENST00000593827 ABCA8O94911 1581 aa32.96■■■□□ 2.87
COPE-204ENST00000593827 RANGAP1P46060 587 aaPredicted RBP32.96■■■□□ 2.87
COPE-204ENST00000593827 ZCCHC11Q5TAX3 1644 aaKnown RBP32.91■■■□□ 2.86
COPE-204ENST00000593827 EFCAB5A4FU69 1503 aa32.89■■■□□ 2.86
COPE-204ENST00000593827 GLI2P10070 1586 aa32.87■■■□□ 2.85
COPE-204ENST00000593827 EHMT2Q96KQ7 1210 aa32.87■■■□□ 2.85
COPE-204ENST00000593827 WDR7Q9Y4E6 1490 aa32.86■■■□□ 2.85
COPE-204ENST00000593827 EPRSP07814 1512 aaKnown RBP32.84■■■□□ 2.85
COPE-204ENST00000593827 FHOD3Q2V2M9 1422 aa32.82■■■□□ 2.84
COPE-204ENST00000593827 RAPGEF6Q8TEU7 1601 aa32.75■■■□□ 2.83
COPE-204ENST00000593827 ATP10BO94823 1461 aa32.74■■■□□ 2.83
COPE-204ENST00000593827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.72■■■□□ 2.83
COPE-204ENST00000593827 HNRNPUL2Q1KMD3 747 aaKnown RBP32.72■■■□□ 2.83
COPE-204ENST00000593827 ARID3CA6NKF2 412 aa32.71■■■□□ 2.83
COPE-204ENST00000593827 KCNH8Q96L42 1107 aa32.71■■■□□ 2.83
COPE-204ENST00000593827 TEX14Q8IWB6 1497 aa32.69■■■□□ 2.82
COPE-204ENST00000593827 TSPOAP1O95153 1857 aa32.67■■■□□ 2.82
COPE-204ENST00000593827 FMN1Q68DA7 1419 aa32.66■■■□□ 2.82
COPE-204ENST00000593827 NUP153P49790 1475 aaKnown RBP32.64■■■□□ 2.82
COPE-204ENST00000593827 KDM6BO15054 1643 aa32.63■■■□□ 2.81
COPE-204ENST00000593827 MAP3K4Q9Y6R4 1608 aa32.63■■■□□ 2.81
COPE-204ENST00000593827 CD109Q6YHK3 1445 aa32.61■■■□□ 2.81
COPE-204ENST00000593827 ARHGAP35Q9NRY4 1499 aa32.6■■■□□ 2.81
COPE-204ENST00000593827 PLEKHD1A6NEE1 506 aa32.58■■■□□ 2.81
COPE-204ENST00000593827 MAGI3Q5TCQ9 1506 aa32.54■■■□□ 2.8
COPE-204ENST00000593827 CFAP43Q8NDM7 1665 aa32.53■■■□□ 2.8
COPE-204ENST00000593827 PPRC1Q5VV67 1664 aaKnown RBP32.53■■■□□ 2.8
COPE-204ENST00000593827 ATP1B4Q9UN42 357 aaPredicted RBP32.5■■■□□ 2.79
COPE-204ENST00000593827 CDK11AQ9UQ88 783 aaPredicted RBP32.46■■■□□ 2.79
COPE-204ENST00000593827 HECW1Q76N89 1606 aa32.44■■■□□ 2.78
COPE-204ENST00000593827 PHLDB1Q86UU1 1377 aa32.42■■■□□ 2.78
COPE-204ENST00000593827 ABCA9Q8IUA7 1624 aa32.4■■■□□ 2.78
COPE-204ENST00000593827 CLIP1P30622 1438 aa32.4■■■□□ 2.78
COPE-204ENST00000593827 CDK13Q14004 1512 aaKnown RBP32.34■■■□□ 2.77
COPE-204ENST00000593827 COL17A1Q9UMD9 1497 aaPredicted RBP32.33■■■□□ 2.77
COPE-204ENST00000593827 CASKIN1Q8WXD9 1431 aa32.31■■■□□ 2.76
COPE-204ENST00000593827 NEO1Q92859 1461 aa32.29■■■□□ 2.76
COPE-204ENST00000593827 ARAP3Q8WWN8 1544 aa32.26■■■□□ 2.76
COPE-204ENST00000593827 CCDC18Q5T9S5 1454 aa32.25■■■□□ 2.75
COPE-204ENST00000593827 FYCO1Q9BQS8 1478 aa32.22■■■□□ 2.75
COPE-204ENST00000593827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.21■■■□□ 2.752e-7■□□□□ 9.6
COPE-204ENST00000593827 TROQ12816 1431 aaPredicted RBP32.19■■■□□ 2.74
COPE-204ENST00000593827 PCF11O94913 1555 aaKnown RBP32.17■■■□□ 2.74
COPE-204ENST00000593827 CEP162Q5TB80 1403 aa32.16■■■□□ 2.74
COPE-204ENST00000593827 FANCAO15360 1455 aa32.14■■■□□ 2.74
COPE-204ENST00000593827 CFAP74Q9C0B2 1584 aa32.13■■■□□ 2.73
COPE-204ENST00000593827 PLCH2O75038 1416 aa32.11■■■□□ 2.73
COPE-204ENST00000593827 KIF14Q15058 1648 aa32.11■■■□□ 2.73
COPE-204ENST00000593827 TTC37Q6PGP7 1564 aa32.11■■■□□ 2.73
COPE-204ENST00000593827 AKNAQ7Z591 1439 aa32.09■■■□□ 2.73
COPE-204ENST00000593827 EFCAB2Q5VUJ9 269 aa32.07■■■□□ 2.72
COPE-204ENST00000593827 KDM4FA0A1W2PPD8 638 aa32.06■■■□□ 2.72
COPE-204ENST00000593827 RAPGEF3O95398 923 aa32.06■■■□□ 2.72
COPE-204ENST00000593827 DENND4BO75064 1496 aaPredicted RBP32.05■■■□□ 2.72
COPE-204ENST00000593827 LOC105371045A0A1W2PR82 267 aa32.03■■■□□ 2.72
COPE-204ENST00000593827 LRRIQ1Q96JM4 1722 aa31.99■■■□□ 2.71
COPE-204ENST00000593827 ADGRL1O94910 1474 aa31.96■■■□□ 2.71
COPE-204ENST00000593827 MYO5CQ9NQX4 1742 aa31.95■■■□□ 2.7
COPE-204ENST00000593827 SCAPERQ9BY12 1400 aa31.92■■■□□ 2.7
COPE-204ENST00000593827 ARHGAP5Q13017 1502 aa31.92■■■□□ 2.7
COPE-204ENST00000593827 MTUS2Q5JR59 1369 aa31.92■■■□□ 2.7
COPE-204ENST00000593827 FRMPD1Q5SYB0 1578 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms