RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 JPH4Q96JJ6 628 aa31.55■■■□□ 2.64
SHKBP1-202ENST00000593764 PRG4Q92954 1404 aaPredicted RBP31.48■■■□□ 2.63
SHKBP1-202ENST00000593764 KIAA0586Q9BVV6 1533 aa31.47■■■□□ 2.63
SHKBP1-202ENST00000593764 RAPGEF2Q9Y4G8 1499 aa31.35■■■□□ 2.61
SHKBP1-202ENST00000593764 TRHP20396 242 aaPredicted RBP31.25■■■□□ 2.59
SHKBP1-202ENST00000593764 IQGAP2Q13576 1575 aa31.21■■■□□ 2.59
SHKBP1-202ENST00000593764 PRXQ9BXM0 1461 aa31.21■■■□□ 2.59
SHKBP1-202ENST00000593764 CSRNP3Q8WYN3 585 aa31.13■■■□□ 2.57
SHKBP1-202ENST00000593764 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
SHKBP1-202ENST00000593764 CARMIL2Q6F5E8 1435 aa31.1■■■□□ 2.57
SHKBP1-202ENST00000593764 DISP1Q96F81 1524 aa31.07■■■□□ 2.56
SHKBP1-202ENST00000593764 UGGT2Q9NYU1 1516 aa31.07■■■□□ 2.56
SHKBP1-202ENST00000593764 PTPRGP23470 1445 aa31.07■■■□□ 2.56
SHKBP1-202ENST00000593764 TNIKQ9UKE5 1360 aa31.05■■■□□ 2.56
SHKBP1-202ENST00000593764 EEA1Q15075 1411 aa31.05■■■□□ 2.56
SHKBP1-202ENST00000593764 ADCY10Q96PN6 1610 aa31.01■■■□□ 2.55
SHKBP1-202ENST00000593764 TTBK1Q5TCY1 1321 aaPredicted RBP30.98■■■□□ 2.55
SHKBP1-202ENST00000593764 CTTNBP2Q8WZ74 1663 aa30.98■■■□□ 2.55
SHKBP1-202ENST00000593764 FAM9AQ8IZU1 332 aaPredicted RBP30.96■■■□□ 2.55
SHKBP1-202ENST00000593764 NPM1P06748 294 aaKnown RBP eCLIP30.94■■■□□ 2.54
SHKBP1-202ENST00000593764 KIAA0556O60303 1618 aa30.91■■■□□ 2.54
SHKBP1-202ENST00000593764 MAPKBP1O60336 1514 aa30.85■■■□□ 2.53
SHKBP1-202ENST00000593764 UACAQ9BZF9 1416 aa30.84■■■□□ 2.53
SHKBP1-202ENST00000593764 GOLGA3Q08378 1498 aa30.83■■■□□ 2.53
SHKBP1-202ENST00000593764 UHRF1BP1LA0JNW5 1464 aa30.82■■■□□ 2.53
SHKBP1-202ENST00000593764 ABCC2Q92887 1545 aa30.8■■■□□ 2.52
SHKBP1-202ENST00000593764 ABCC10Q5T3U5 1492 aa30.77■■■□□ 2.52
SHKBP1-202ENST00000593764 KIF13AQ9H1H9 1805 aa30.77■■■□□ 2.52
SHKBP1-202ENST00000593764 FAM69CQ0P6D2 419 aa30.74■■■□□ 2.51
SHKBP1-202ENST00000593764 KIF21BO75037 1637 aa30.73■■■□□ 2.51
SHKBP1-202ENST00000593764 P3H3Q8IVL6 736 aa30.69■■■□□ 2.5
SHKBP1-202ENST00000593764 PLB1Q6P1J6 1458 aa30.69■■■□□ 2.5
SHKBP1-202ENST00000593764 KDM5BQ9UGL1 1544 aa30.68■■■□□ 2.5
SHKBP1-202ENST00000593764 DIP2BQ9P265 1576 aa30.68■■■□□ 2.5
SHKBP1-202ENST00000593764 ASXL2Q76L83 1435 aa30.65■■■□□ 2.5
SHKBP1-202ENST00000593764 SAMD9Q5K651 1589 aa30.63■■■□□ 2.49
SHKBP1-202ENST00000593764 ABCA8O94911 1581 aa30.62■■■□□ 2.49
SHKBP1-202ENST00000593764 RANGAP1P46060 587 aaPredicted RBP30.59■■■□□ 2.49
SHKBP1-202ENST00000593764 EHMT2Q96KQ7 1210 aa30.58■■■□□ 2.49
SHKBP1-202ENST00000593764 ZCCHC11Q5TAX3 1644 aaKnown RBP30.58■■■□□ 2.49
SHKBP1-202ENST00000593764 UBTFP17480 764 aaKnown RBP30.53■■■□□ 2.48
SHKBP1-202ENST00000593764 FHOD3Q2V2M9 1422 aa30.47■■■□□ 2.47
SHKBP1-202ENST00000593764 GLI2P10070 1586 aa30.47■■■□□ 2.47
SHKBP1-202ENST00000593764 EPRSP07814 1512 aaKnown RBP30.47■■■□□ 2.47
SHKBP1-202ENST00000593764 WDR7Q9Y4E6 1490 aa30.43■■■□□ 2.46
SHKBP1-202ENST00000593764 EFCAB5A4FU69 1503 aa30.42■■■□□ 2.46
SHKBP1-202ENST00000593764 TSPOAP1O95153 1857 aa30.42■■■□□ 2.46
SHKBP1-202ENST00000593764 ATP10BO94823 1461 aa30.41■■■□□ 2.46
SHKBP1-202ENST00000593764 ARID3CA6NKF2 412 aa30.4■■■□□ 2.46
SHKBP1-202ENST00000593764 RAPGEF6Q8TEU7 1601 aa30.37■■■□□ 2.45
SHKBP1-202ENST00000593764 KCNH8Q96L42 1107 aa30.33■■■□□ 2.45
SHKBP1-202ENST00000593764 PPRC1Q5VV67 1664 aaKnown RBP30.33■■■□□ 2.45
SHKBP1-202ENST00000593764 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
SHKBP1-202ENST00000593764 MAP3K4Q9Y6R4 1608 aa30.31■■■□□ 2.44
SHKBP1-202ENST00000593764 ARHGAP35Q9NRY4 1499 aa30.3■■■□□ 2.44
SHKBP1-202ENST00000593764 KDM6BO15054 1643 aa30.23■■■□□ 2.43
SHKBP1-202ENST00000593764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.21■■■□□ 2.43
SHKBP1-202ENST00000593764 HNRNPUL2Q1KMD3 747 aaKnown RBP30.21■■■□□ 2.43
SHKBP1-202ENST00000593764 CD109Q6YHK3 1445 aa30.2■■■□□ 2.42
SHKBP1-202ENST00000593764 FMN1Q68DA7 1419 aa30.17■■■□□ 2.42
SHKBP1-202ENST00000593764 TEX14Q8IWB6 1497 aa30.17■■■□□ 2.42
SHKBP1-202ENST00000593764 CFAP43Q8NDM7 1665 aa30.16■■■□□ 2.42
SHKBP1-202ENST00000593764 MAGI3Q5TCQ9 1506 aa30.15■■■□□ 2.42
SHKBP1-202ENST00000593764 COL17A1Q9UMD9 1497 aaPredicted RBP30.14■■■□□ 2.42
SHKBP1-202ENST00000593764 PLEKHD1A6NEE1 506 aa30.11■■■□□ 2.41
SHKBP1-202ENST00000593764 ABCA9Q8IUA7 1624 aa30.07■■■□□ 2.4
SHKBP1-202ENST00000593764 CDK13Q14004 1512 aaKnown RBP30.06■■■□□ 2.4
SHKBP1-202ENST00000593764 ATP1B4Q9UN42 357 aaPredicted RBP30.05■■■□□ 2.4
SHKBP1-202ENST00000593764 HECW1Q76N89 1606 aa30.01■■■□□ 2.39
SHKBP1-202ENST00000593764 CLIP1P30622 1438 aa30.01■■■□□ 2.39
SHKBP1-202ENST00000593764 CASKIN1Q8WXD9 1431 aa29.93■■■□□ 2.38
SHKBP1-202ENST00000593764 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.91■■■□□ 2.38
SHKBP1-202ENST00000593764 ARAP3Q8WWN8 1544 aa29.9■■■□□ 2.38
SHKBP1-202ENST00000593764 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
SHKBP1-202ENST00000593764 LRRIQ1Q96JM4 1722 aa29.89■■■□□ 2.38
SHKBP1-202ENST00000593764 CDK11AQ9UQ88 783 aaPredicted RBP29.89■■■□□ 2.38
SHKBP1-202ENST00000593764 PCF11O94913 1555 aaKnown RBP29.88■■■□□ 2.37
SHKBP1-202ENST00000593764 LOC105371045A0A1W2PR82 267 aa29.87■■■□□ 2.37
SHKBP1-202ENST00000593764 NEO1Q92859 1461 aa29.87■■■□□ 2.37
SHKBP1-202ENST00000593764 TTC37Q6PGP7 1564 aa29.86■■■□□ 2.37
SHKBP1-202ENST00000593764 AEBP2Q6ZN18 517 aaPredicted RBP29.83■■■□□ 2.37
SHKBP1-202ENST00000593764 TROQ12816 1431 aaPredicted RBP29.82■■■□□ 2.36
SHKBP1-202ENST00000593764 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
SHKBP1-202ENST00000593764 FYCO1Q9BQS8 1478 aa29.81■■■□□ 2.36
SHKBP1-202ENST00000593764 CCDC18Q5T9S5 1454 aa29.8■■■□□ 2.36
SHKBP1-202ENST00000593764 KDM4FA0A1W2PPD8 638 aa29.79■■■□□ 2.36
SHKBP1-202ENST00000593764 RAPGEF3O95398 923 aa29.78■■■□□ 2.36
SHKBP1-202ENST00000593764 FANCAO15360 1455 aa29.76■■■□□ 2.35
SHKBP1-202ENST00000593764 PLCH2O75038 1416 aa29.76■■■□□ 2.35
SHKBP1-202ENST00000593764 AKNAQ7Z591 1439 aa29.75■■■□□ 2.35
SHKBP1-202ENST00000593764 KIF14Q15058 1648 aa29.74■■■□□ 2.35
SHKBP1-202ENST00000593764 FRMPD1Q5SYB0 1578 aa29.68■■■□□ 2.34
SHKBP1-202ENST00000593764 CFAP74Q9C0B2 1584 aa29.68■■■□□ 2.34
SHKBP1-202ENST00000593764 DENND4BO75064 1496 aaPredicted RBP29.66■■■□□ 2.34
SHKBP1-202ENST00000593764 EFCAB2Q5VUJ9 269 aa29.64■■■□□ 2.34
SHKBP1-202ENST00000593764 MYO5CQ9NQX4 1742 aa29.63■■■□□ 2.33
SHKBP1-202ENST00000593764 ADGRL1O94910 1474 aa29.61■■■□□ 2.33
SHKBP1-202ENST00000593764 RICTORQ6R327 1708 aa29.6■■■□□ 2.33
SHKBP1-202ENST00000593764 SCAPERQ9BY12 1400 aa29.59■■■□□ 2.33
SHKBP1-202ENST00000593764 ARHGAP5Q13017 1502 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms