RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 JPH4Q96JJ6 628 aa25.94■■□□□ 1.74
PNKP-202ENST00000593706 KIF27Q86VH2 1401 aa25.89■■□□□ 1.74
PNKP-202ENST00000593706 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
PNKP-202ENST00000593706 ADCY10Q96PN6 1610 aa25.87■■□□□ 1.73
PNKP-202ENST00000593706 KIAA0586Q9BVV6 1533 aa25.83■■□□□ 1.73
PNKP-202ENST00000593706 MAPKBP1O60336 1514 aa25.81■■□□□ 1.72
PNKP-202ENST00000593706 IGF1RP08069 1367 aa25.8■■□□□ 1.72
PNKP-202ENST00000593706 DIP2BQ9P265 1576 aa25.79■■□□□ 1.72
PNKP-202ENST00000593706 NPM1P06748 294 aaKnown RBP eCLIP25.77■■□□□ 1.72
PNKP-202ENST00000593706 TSPOAP1O95153 1857 aa25.76■■□□□ 1.71
PNKP-202ENST00000593706 ABCC10Q5T3U5 1492 aa25.75■■□□□ 1.71
PNKP-202ENST00000593706 IQGAP2Q13576 1575 aa25.69■■□□□ 1.7
PNKP-202ENST00000593706 FAM69CQ0P6D2 419 aa25.68■■□□□ 1.7
PNKP-202ENST00000593706 CARMIL1Q5VZK9 1371 aa25.67■■□□□ 1.7
PNKP-202ENST00000593706 KDM6BO15054 1643 aa25.63■■□□□ 1.69
PNKP-202ENST00000593706 CARMIL2Q6F5E8 1435 aa25.62■■□□□ 1.69
PNKP-202ENST00000593706 PTPRGP23470 1445 aa25.6■■□□□ 1.69
PNKP-202ENST00000593706 TTBK1Q5TCY1 1321 aaPredicted RBP25.59■■□□□ 1.69
PNKP-202ENST00000593706 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
PNKP-202ENST00000593706 ABCC2Q92887 1545 aa25.53■■□□□ 1.68
PNKP-202ENST00000593706 CTTNBP2Q8WZ74 1663 aa25.52■■□□□ 1.68
PNKP-202ENST00000593706 RAPGEF2Q9Y4G8 1499 aa25.48■■□□□ 1.67
PNKP-202ENST00000593706 DISP1Q96F81 1524 aa25.47■■□□□ 1.67
PNKP-202ENST00000593706 PPRC1Q5VV67 1664 aaKnown RBP25.46■■□□□ 1.67
PNKP-202ENST00000593706 KIAA0556O60303 1618 aa25.45■■□□□ 1.67
PNKP-202ENST00000593706 UGGT2Q9NYU1 1516 aa25.45■■□□□ 1.66
PNKP-202ENST00000593706 UHRF1BP1LA0JNW5 1464 aa25.45■■□□□ 1.66
PNKP-202ENST00000593706 ASXL2Q76L83 1435 aa25.44■■□□□ 1.66
PNKP-202ENST00000593706 PLB1Q6P1J6 1458 aa25.43■■□□□ 1.66
PNKP-202ENST00000593706 ZCCHC11Q5TAX3 1644 aaKnown RBP25.43■■□□□ 1.66
PNKP-202ENST00000593706 GLI2P10070 1586 aa25.43■■□□□ 1.66
PNKP-202ENST00000593706 UACAQ9BZF9 1416 aa25.42■■□□□ 1.66
PNKP-202ENST00000593706 MAP3K4Q9Y6R4 1608 aa25.36■■□□□ 1.65
PNKP-202ENST00000593706 KDM5BQ9UGL1 1544 aa25.34■■□□□ 1.65
PNKP-202ENST00000593706 EPRSP07814 1512 aaKnown RBP25.29■■□□□ 1.64
PNKP-202ENST00000593706 GOLGA3Q08378 1498 aa25.25■■□□□ 1.63
PNKP-202ENST00000593706 TEX14Q8IWB6 1497 aa25.24■■□□□ 1.63
PNKP-202ENST00000593706 KDM4FA0A1W2PPD8 638 aa25.21■■□□□ 1.63
PNKP-202ENST00000593706 WDR7Q9Y4E6 1490 aa25.21■■□□□ 1.63
PNKP-202ENST00000593706 CFAP43Q8NDM7 1665 aa25.2■■□□□ 1.62
PNKP-202ENST00000593706 ABCA8O94911 1581 aa25.18■■□□□ 1.62
PNKP-202ENST00000593706 PRXQ9BXM0 1461 aa25.15■■□□□ 1.62
PNKP-202ENST00000593706 ADGRL1O94910 1474 aa25.12■■□□□ 1.61
PNKP-202ENST00000593706 COL17A1Q9UMD9 1497 aaPredicted RBP25.11■■□□□ 1.61
PNKP-202ENST00000593706 MAGI3Q5TCQ9 1506 aa25.02■■□□□ 1.6
PNKP-202ENST00000593706 CD109Q6YHK3 1445 aa25.02■■□□□ 1.6
PNKP-202ENST00000593706 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
PNKP-202ENST00000593706 KCNH8Q96L42 1107 aa24.99■■□□□ 1.59
PNKP-202ENST00000593706 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
PNKP-202ENST00000593706 RAPGEF6Q8TEU7 1601 aa24.96■■□□□ 1.59
PNKP-202ENST00000593706 KIF21BO75037 1637 aa24.94■■□□□ 1.58
PNKP-202ENST00000593706 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
PNKP-202ENST00000593706 ABCA9Q8IUA7 1624 aa24.92■■□□□ 1.58
PNKP-202ENST00000593706 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
PNKP-202ENST00000593706 ATP10BO94823 1461 aa24.89■■□□□ 1.57
PNKP-202ENST00000593706 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
PNKP-202ENST00000593706 HECW2Q9P2P5 1572 aa24.86■■□□□ 1.57
PNKP-202ENST00000593706 EEA1Q15075 1411 aa24.84■■□□□ 1.57
PNKP-202ENST00000593706 ARAP3Q8WWN8 1544 aa24.83■■□□□ 1.57
PNKP-202ENST00000593706 NUP153P49790 1475 aaKnown RBP24.77■■□□□ 1.56
PNKP-202ENST00000593706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.76■■□□□ 1.55
PNKP-202ENST00000593706 HNRNPUL2Q1KMD3 747 aaKnown RBP24.76■■□□□ 1.55
PNKP-202ENST00000593706 FHOD3Q2V2M9 1422 aa24.76■■□□□ 1.55
PNKP-202ENST00000593706 RANGAP1P46060 587 aaPredicted RBP24.75■■□□□ 1.55
PNKP-202ENST00000593706 EFCAB5A4FU69 1503 aa24.73■■□□□ 1.55
PNKP-202ENST00000593706 NEO1Q92859 1461 aa24.72■■□□□ 1.55
PNKP-202ENST00000593706 PHLDB1Q86UU1 1377 aa24.72■■□□□ 1.55
PNKP-202ENST00000593706 FRMPD1Q5SYB0 1578 aa24.71■■□□□ 1.55
PNKP-202ENST00000593706 CFAP74Q9C0B2 1584 aa24.7■■□□□ 1.54
PNKP-202ENST00000593706 RICTORQ6R327 1708 aa24.66■■□□□ 1.54
PNKP-202ENST00000593706 ADAMTSL3P82987 1691 aa24.66■■□□□ 1.54
PNKP-202ENST00000593706 BCORL1Q5H9F3 1711 aa24.65■■□□□ 1.54
PNKP-202ENST00000593706 TTC37Q6PGP7 1564 aa24.63■■□□□ 1.53
PNKP-202ENST00000593706 ARHGEF40Q8TER5 1519 aa24.61■■□□□ 1.53
PNKP-202ENST00000593706 RAPGEF3O95398 923 aa24.61■■□□□ 1.53
PNKP-202ENST00000593706 MADDQ8WXG6 1647 aa24.6■■□□□ 1.53
PNKP-202ENST00000593706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.6■■□□□ 1.53
PNKP-202ENST00000593706 ILDR1Q86SU0 546 aaPredicted RBP24.59■■□□□ 1.53
PNKP-202ENST00000593706 PLEKHD1A6NEE1 506 aa24.57■■□□□ 1.52
PNKP-202ENST00000593706 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
PNKP-202ENST00000593706 FANCAO15360 1455 aa24.56■■□□□ 1.52
PNKP-202ENST00000593706 PTPRMP28827 1452 aa24.56■■□□□ 1.52
PNKP-202ENST00000593706 RIMS1Q86UR5 1692 aaKnown RBP24.55■■□□□ 1.52
PNKP-202ENST00000593706 HECW1Q76N89 1606 aa24.54■■□□□ 1.52
PNKP-202ENST00000593706 DENND4BO75064 1496 aaPredicted RBP24.54■■□□□ 1.52
PNKP-202ENST00000593706 MYO5CQ9NQX4 1742 aa24.53■■□□□ 1.52
PNKP-202ENST00000593706 AKNAQ7Z591 1439 aa24.52■■□□□ 1.52
PNKP-202ENST00000593706 ARID4BQ4LE39 1312 aaPredicted RBP24.51■■□□□ 1.51
PNKP-202ENST00000593706 ZMYM4Q5VZL5 1548 aa24.5■■□□□ 1.51
PNKP-202ENST00000593706 EHMT2Q96KQ7 1210 aa24.47■■□□□ 1.51
PNKP-202ENST00000593706 ZFYVE16Q7Z3T8 1539 aa24.46■■□□□ 1.51
PNKP-202ENST00000593706 SIGLEC1Q9BZZ2 1709 aa24.45■■□□□ 1.5
PNKP-202ENST00000593706 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
PNKP-202ENST00000593706 FER1L4A9Z1Z3 1794 aa24.44■■□□□ 1.5
PNKP-202ENST00000593706 UBTFP17480 764 aaKnown RBP24.44■■□□□ 1.5
PNKP-202ENST00000593706 LRRIQ1Q96JM4 1722 aa24.44■■□□□ 1.5
PNKP-202ENST00000593706 PCF11O94913 1555 aaKnown RBP24.42■■□□□ 1.5
PNKP-202ENST00000593706 KIF14Q15058 1648 aa24.42■■□□□ 1.5
PNKP-202ENST00000593706 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
PNKP-202ENST00000593706 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms