RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-212ENST00000593160 EFCAB5A4FU69 1503 aa20.08■□□□□ 0.8
CACNA1A-212ENST00000593160 GRIN2AQ12879 1464 aa20.07■□□□□ 0.8
CACNA1A-212ENST00000593160 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
CACNA1A-212ENST00000593160 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
CACNA1A-212ENST00000593160 IQGAP2Q13576 1575 aa20.03■□□□□ 0.8
CACNA1A-212ENST00000593160 CEP170Q5SW79 1584 aa19.98■□□□□ 0.79
CACNA1A-212ENST00000593160 KIAA0586Q9BVV6 1533 aa19.95■□□□□ 0.78
CACNA1A-212ENST00000593160 FHOD3Q2V2M9 1422 aa19.94■□□□□ 0.78
CACNA1A-212ENST00000593160 NUP160Q12769 1436 aa19.93■□□□□ 0.78
CACNA1A-212ENST00000593160 UGGT2Q9NYU1 1516 aa19.93■□□□□ 0.78
CACNA1A-212ENST00000593160 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-212ENST00000593160 PCF11O94913 1555 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-212ENST00000593160 CHD1O14646 1710 aa19.91■□□□□ 0.78
CACNA1A-212ENST00000593160 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-212ENST00000593160 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
CACNA1A-212ENST00000593160 PCGF6Q9BYE7 350 aa19.89■□□□□ 0.77
CACNA1A-212ENST00000593160 P3H3Q8IVL6 736 aa19.85■□□□□ 0.77
CACNA1A-212ENST00000593160 KIAA0556O60303 1618 aa19.85■□□□□ 0.77
CACNA1A-212ENST00000593160 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
CACNA1A-212ENST00000593160 CFAP43Q8NDM7 1665 aa19.84■□□□□ 0.77
CACNA1A-212ENST00000593160 FMN1Q68DA7 1419 aa19.83■□□□□ 0.77
CACNA1A-212ENST00000593160 MAP3K1Q13233 1512 aa19.83■□□□□ 0.77
CACNA1A-212ENST00000593160 DISP1Q96F81 1524 aa19.82■□□□□ 0.76
CACNA1A-212ENST00000593160 TIAM1Q13009 1591 aa19.82■□□□□ 0.76
CACNA1A-212ENST00000593160 FBLN2P98095 1184 aa19.81■□□□□ 0.76
CACNA1A-212ENST00000593160 CASKIN1Q8WXD9 1431 aa19.81■□□□□ 0.76
CACNA1A-212ENST00000593160 APLP2Q06481 763 aa19.79■□□□□ 0.76
CACNA1A-212ENST00000593160 LRRIQ1Q96JM4 1722 aa19.76■□□□□ 0.75
CACNA1A-212ENST00000593160 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-212ENST00000593160 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
CACNA1A-212ENST00000593160 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-212ENST00000593160 HECW1Q76N89 1606 aa19.7■□□□□ 0.74
CACNA1A-212ENST00000593160 LRRC9Q6ZRR7 1453 aa19.69■□□□□ 0.74
CACNA1A-212ENST00000593160 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
CACNA1A-212ENST00000593160 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
CACNA1A-212ENST00000593160 CARMIL2Q6F5E8 1435 aa19.66■□□□□ 0.74
CACNA1A-212ENST00000593160 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.73
CACNA1A-212ENST00000593160 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
CACNA1A-212ENST00000593160 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-212ENST00000593160 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-212ENST00000593160 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-212ENST00000593160 NUP153P49790 1475 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-212ENST00000593160 EHBP1L1Q8N3D4 1523 aa19.56■□□□□ 0.72
CACNA1A-212ENST00000593160 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-212ENST00000593160 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
CACNA1A-212ENST00000593160 RRBP1Q9P2E9 1410 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-212ENST00000593160 ABCA8O94911 1581 aa19.55■□□□□ 0.72
CACNA1A-212ENST00000593160 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
CACNA1A-212ENST00000593160 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
CACNA1A-212ENST00000593160 SUPT6HQ7KZ85 1726 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-212ENST00000593160 PHLDB1Q86UU1 1377 aa19.5■□□□□ 0.71
CACNA1A-212ENST00000593160 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
CACNA1A-212ENST00000593160 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
CACNA1A-212ENST00000593160 NCOA2Q15596 1464 aa19.45■□□□□ 0.7
CACNA1A-212ENST00000593160 CCNB3Q8WWL7 1395 aa19.45■□□□□ 0.7
CACNA1A-212ENST00000593160 PTPRGP23470 1445 aa19.44■□□□□ 0.7
CACNA1A-212ENST00000593160 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
CACNA1A-212ENST00000593160 ARID3CA6NKF2 412 aa19.38■□□□□ 0.69
CACNA1A-212ENST00000593160 UACAQ9BZF9 1416 aa19.38■□□□□ 0.69
CACNA1A-212ENST00000593160 ABCC2Q92887 1545 aa19.37■□□□□ 0.69
CACNA1A-212ENST00000593160 ATP10BO94823 1461 aa19.36■□□□□ 0.69
CACNA1A-212ENST00000593160 MYOM3Q5VTT5 1437 aa19.36■□□□□ 0.69
CACNA1A-212ENST00000593160 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
CACNA1A-212ENST00000593160 TROQ12816 1431 aaPredicted RBP19.35■□□□□ 0.69
CACNA1A-212ENST00000593160 HRCP23327 699 aa19.33■□□□□ 0.69
CACNA1A-212ENST00000593160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.33■□□□□ 0.69
CACNA1A-212ENST00000593160 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
CACNA1A-212ENST00000593160 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
CACNA1A-212ENST00000593160 KIF14Q15058 1648 aa19.31■□□□□ 0.68
CACNA1A-212ENST00000593160 UHRF1BP1LA0JNW5 1464 aa19.31■□□□□ 0.68
CACNA1A-212ENST00000593160 PTPN23Q9H3S7 1636 aa19.3■□□□□ 0.68
CACNA1A-212ENST00000593160 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
CACNA1A-212ENST00000593160 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-212ENST00000593160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-212ENST00000593160 ZCCHC11Q5TAX3 1644 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-212ENST00000593160 ITSN2Q9NZM3 1697 aa19.25■□□□□ 0.67
CACNA1A-212ENST00000593160 MIA2Q96PC5 1412 aa19.25■□□□□ 0.67
CACNA1A-212ENST00000593160 KDM5BQ9UGL1 1544 aa19.23■□□□□ 0.67
CACNA1A-212ENST00000593160 FAM50AQ14320 339 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-212ENST00000593160 ABCC10Q5T3U5 1492 aa19.22■□□□□ 0.67
CACNA1A-212ENST00000593160 CDC42BPAQ5VT25 1732 aa19.21■□□□□ 0.67
CACNA1A-212ENST00000593160 PLEKHD1A6NEE1 506 aa19.18■□□□□ 0.66
CACNA1A-212ENST00000593160 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-212ENST00000593160 ITGAEP38570 1179 aa19.16■□□□□ 0.66
CACNA1A-212ENST00000593160 PTPRKQ15262 1439 aa19.15■□□□□ 0.66
CACNA1A-212ENST00000593160 TTC37Q6PGP7 1564 aa19.13■□□□□ 0.65
CACNA1A-212ENST00000593160 PREX2Q70Z35 1606 aa19.13■□□□□ 0.65
CACNA1A-212ENST00000593160 DNMT1P26358 1616 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-212ENST00000593160 CAMSAP2Q08AD1 1489 aa19.11■□□□□ 0.65
CACNA1A-212ENST00000593160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.11■□□□□ 0.65
CACNA1A-212ENST00000593160 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-212ENST00000593160 CDC42BPBQ9Y5S2 1711 aa19.1■□□□□ 0.65
CACNA1A-212ENST00000593160 SETD5Q9C0A6 1442 aa19.08■□□□□ 0.65
CACNA1A-212ENST00000593160 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.65
CACNA1A-212ENST00000593160 RAB3GAP2Q9H2M9 1393 aa19.08■□□□□ 0.64
CACNA1A-212ENST00000593160 CROCC2H7BZ55 1655 aa19.07■□□□□ 0.64
CACNA1A-212ENST00000593160 GCC2Q8IWJ2 1684 aa19.07■□□□□ 0.64
CACNA1A-212ENST00000593160 MYO5CQ9NQX4 1742 aa19.07■□□□□ 0.64
CACNA1A-212ENST00000593160 HFM1A2PYH4 1435 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms