RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
PRKCSH-218ENST00000593053 CUL7Q14999 1698 aa22.53■■□□□ 1.2
PRKCSH-218ENST00000593053 CARMIL1Q5VZK9 1371 aa22.51■■□□□ 1.19
PRKCSH-218ENST00000593053 KIAA0586Q9BVV6 1533 aa22.48■■□□□ 1.19
PRKCSH-218ENST00000593053 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
PRKCSH-218ENST00000593053 NPM1P06748 294 aaKnown RBP eCLIP22.28■■□□□ 1.16
PRKCSH-218ENST00000593053 IQGAP2Q13576 1575 aa22.28■■□□□ 1.16
PRKCSH-218ENST00000593053 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.16
PRKCSH-218ENST00000593053 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
PRKCSH-218ENST00000593053 PTPRGP23470 1445 aa22.25■■□□□ 1.15
PRKCSH-218ENST00000593053 ADCY10Q96PN6 1610 aa22.23■■□□□ 1.15
PRKCSH-218ENST00000593053 TNIKQ9UKE5 1360 aa22.23■■□□□ 1.15
PRKCSH-218ENST00000593053 DISP1Q96F81 1524 aa22.18■■□□□ 1.14
PRKCSH-218ENST00000593053 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
PRKCSH-218ENST00000593053 FAM69CQ0P6D2 419 aa22.15■■□□□ 1.14
PRKCSH-218ENST00000593053 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
PRKCSH-218ENST00000593053 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
PRKCSH-218ENST00000593053 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
PRKCSH-218ENST00000593053 KIF13AQ9H1H9 1805 aa22.1■■□□□ 1.13
PRKCSH-218ENST00000593053 UACAQ9BZF9 1416 aa22.08■■□□□ 1.13
PRKCSH-218ENST00000593053 ABCC2Q92887 1545 aa22.08■■□□□ 1.13
PRKCSH-218ENST00000593053 KIAA0556O60303 1618 aa22.07■■□□□ 1.12
PRKCSH-218ENST00000593053 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
PRKCSH-218ENST00000593053 DIP2BQ9P265 1576 aa22.07■■□□□ 1.12
PRKCSH-218ENST00000593053 UHRF1BP1LA0JNW5 1464 aa22.06■■□□□ 1.12
PRKCSH-218ENST00000593053 CTTNBP2Q8WZ74 1663 aa22.03■■□□□ 1.12
PRKCSH-218ENST00000593053 ASXL2Q76L83 1435 aa22■■□□□ 1.11
PRKCSH-218ENST00000593053 GOLGA3Q08378 1498 aa22■■□□□ 1.11
PRKCSH-218ENST00000593053 EEA1Q15075 1411 aa21.97■■□□□ 1.11
PRKCSH-218ENST00000593053 PLB1Q6P1J6 1458 aa21.97■■□□□ 1.11
PRKCSH-218ENST00000593053 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
PRKCSH-218ENST00000593053 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
PRKCSH-218ENST00000593053 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
PRKCSH-218ENST00000593053 ZCCHC11Q5TAX3 1644 aaKnown RBP21.88■■□□□ 1.09
PRKCSH-218ENST00000593053 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
PRKCSH-218ENST00000593053 ABCA8O94911 1581 aa21.86■■□□□ 1.09
PRKCSH-218ENST00000593053 GLI2P10070 1586 aa21.86■■□□□ 1.09
PRKCSH-218ENST00000593053 EPRSP07814 1512 aaKnown RBP21.85■■□□□ 1.09
PRKCSH-218ENST00000593053 TSPOAP1O95153 1857 aa21.84■■□□□ 1.09
PRKCSH-218ENST00000593053 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
PRKCSH-218ENST00000593053 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
PRKCSH-218ENST00000593053 KDM6BO15054 1643 aa21.81■■□□□ 1.08
PRKCSH-218ENST00000593053 WDR7Q9Y4E6 1490 aa21.81■■□□□ 1.08
PRKCSH-218ENST00000593053 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
PRKCSH-218ENST00000593053 SAMD9Q5K651 1589 aa21.78■■□□□ 1.08
PRKCSH-218ENST00000593053 KCNH8Q96L42 1107 aa21.75■■□□□ 1.07
PRKCSH-218ENST00000593053 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
PRKCSH-218ENST00000593053 KIF21BO75037 1637 aa21.74■■□□□ 1.07
PRKCSH-218ENST00000593053 MAP3K4Q9Y6R4 1608 aa21.73■■□□□ 1.07
PRKCSH-218ENST00000593053 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
PRKCSH-218ENST00000593053 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
PRKCSH-218ENST00000593053 ATP10BO94823 1461 aa21.71■■□□□ 1.07
PRKCSH-218ENST00000593053 TEX14Q8IWB6 1497 aa21.7■■□□□ 1.06
PRKCSH-218ENST00000593053 CD109Q6YHK3 1445 aa21.67■■□□□ 1.06
PRKCSH-218ENST00000593053 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
PRKCSH-218ENST00000593053 COL17A1Q9UMD9 1497 aaPredicted RBP21.66■■□□□ 1.06
PRKCSH-218ENST00000593053 RAPGEF6Q8TEU7 1601 aa21.65■■□□□ 1.06
PRKCSH-218ENST00000593053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.64■■□□□ 1.05
PRKCSH-218ENST00000593053 HNRNPUL2Q1KMD3 747 aaKnown RBP21.64■■□□□ 1.05
PRKCSH-218ENST00000593053 EFCAB5A4FU69 1503 aa21.62■■□□□ 1.05
PRKCSH-218ENST00000593053 NUP153P49790 1475 aaKnown RBP21.62■■□□□ 1.05
PRKCSH-218ENST00000593053 MAGI3Q5TCQ9 1506 aa21.61■■□□□ 1.05
PRKCSH-218ENST00000593053 CFAP43Q8NDM7 1665 aa21.6■■□□□ 1.05
PRKCSH-218ENST00000593053 KDM4FA0A1W2PPD8 638 aa21.56■■□□□ 1.04
PRKCSH-218ENST00000593053 PLEKHD1A6NEE1 506 aa21.51■■□□□ 1.03
PRKCSH-218ENST00000593053 ABCA9Q8IUA7 1624 aa21.5■■□□□ 1.03
PRKCSH-218ENST00000593053 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
PRKCSH-218ENST00000593053 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
PRKCSH-218ENST00000593053 FMN1Q68DA7 1419 aa21.46■■□□□ 1.03
PRKCSH-218ENST00000593053 ARAP3Q8WWN8 1544 aa21.44■■□□□ 1.02
PRKCSH-218ENST00000593053 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
PRKCSH-218ENST00000593053 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-218ENST00000593053 ADGRL1O94910 1474 aa21.41■■□□□ 1.02
PRKCSH-218ENST00000593053 NEO1Q92859 1461 aa21.4■■□□□ 1.02
PRKCSH-218ENST00000593053 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
PRKCSH-218ENST00000593053 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
PRKCSH-218ENST00000593053 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.35■■□□□ 1.012e-23■□□□□ 8.5
PRKCSH-218ENST00000593053 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
PRKCSH-218ENST00000593053 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
PRKCSH-218ENST00000593053 FANCAO15360 1455 aa21.31■■□□□ 1
PRKCSH-218ENST00000593053 AKNAQ7Z591 1439 aa21.29■■□□□ 1
PRKCSH-218ENST00000593053 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
PRKCSH-218ENST00000593053 CLIP1P30622 1438 aa21.26■□□□□ 0.99
PRKCSH-218ENST00000593053 FRMPD1Q5SYB0 1578 aa21.26■□□□□ 0.99
PRKCSH-218ENST00000593053 PLCH2O75038 1416 aa21.25■□□□□ 0.99
PRKCSH-218ENST00000593053 TROQ12816 1431 aaPredicted RBP21.25■□□□□ 0.99
PRKCSH-218ENST00000593053 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
PRKCSH-218ENST00000593053 CFAP74Q9C0B2 1584 aa21.23■□□□□ 0.99
PRKCSH-218ENST00000593053 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
PRKCSH-218ENST00000593053 KIF14Q15058 1648 aa21.19■□□□□ 0.98
PRKCSH-218ENST00000593053 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
PRKCSH-218ENST00000593053 CCDC18Q5T9S5 1454 aa21.19■□□□□ 0.98
PRKCSH-218ENST00000593053 SCAPERQ9BY12 1400 aa21.18■□□□□ 0.98
PRKCSH-218ENST00000593053 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
PRKCSH-218ENST00000593053 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
PRKCSH-218ENST00000593053 FYCO1Q9BQS8 1478 aa21.17■□□□□ 0.98
PRKCSH-218ENST00000593053 RICTORQ6R327 1708 aa21.16■□□□□ 0.98
PRKCSH-218ENST00000593053 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.97
PRKCSH-218ENST00000593053 POGZQ7Z3K3 1410 aa21.13■□□□□ 0.97
PRKCSH-218ENST00000593053 ARHGAP5Q13017 1502 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms