RNA–Protein interactions for RNA: ENST00000593044.5

TMC6-224, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 3,070 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-224ENST00000593044 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
TMC6-224ENST00000593044 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
TMC6-224ENST00000593044 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.51e-9■■■■■ 34.8
TMC6-224ENST00000593044 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
TMC6-224ENST00000593044 ATP1B4Q9UN42 357 aaPredicted RBP24.37■■□□□ 1.49
TMC6-224ENST00000593044 FHOD3Q2V2M9 1422 aa24.31■■□□□ 1.48
TMC6-224ENST00000593044 CTTNBP2Q8WZ74 1663 aa24.29■■□□□ 1.48
TMC6-224ENST00000593044 WDR62O43379 1518 aa24.28■■□□□ 1.48
TMC6-224ENST00000593044 ZNF608Q9ULD9 1512 aaPredicted RBP24.28■■□□□ 1.48
TMC6-224ENST00000593044 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
TMC6-224ENST00000593044 IFT140Q96RY7 1462 aa24.24■■□□□ 1.47
TMC6-224ENST00000593044 FHAD1B1AJZ9 1412 aa24.22■■□□□ 1.47
TMC6-224ENST00000593044 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
TMC6-224ENST00000593044 EFCAB5A4FU69 1503 aa24.18■■□□□ 1.46
TMC6-224ENST00000593044 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
TMC6-224ENST00000593044 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
TMC6-224ENST00000593044 TIAM1Q13009 1591 aa24.15■■□□□ 1.46
TMC6-224ENST00000593044 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.45
TMC6-224ENST00000593044 NEUROD1Q13562 356 aa24.13■■□□□ 1.45
TMC6-224ENST00000593044 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
TMC6-224ENST00000593044 ITGAEP38570 1179 aa24.1■■□□□ 1.45
TMC6-224ENST00000593044 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.45
TMC6-224ENST00000593044 LRRC9Q6ZRR7 1453 aa24.08■■□□□ 1.45
TMC6-224ENST00000593044 EIF4G3O43432 1585 aaKnown RBP24.07■■□□□ 1.44
TMC6-224ENST00000593044 FMN1Q68DA7 1419 aa24.07■■□□□ 1.44
TMC6-224ENST00000593044 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
TMC6-224ENST00000593044 CASKIN1Q8WXD9 1431 aa24.06■■□□□ 1.44
TMC6-224ENST00000593044 MAP3K1Q13233 1512 aa24.06■■□□□ 1.44
TMC6-224ENST00000593044 FYCO1Q9BQS8 1478 aa24.05■■□□□ 1.44
TMC6-224ENST00000593044 FBLN2P98095 1184 aa24.04■■□□□ 1.44
TMC6-224ENST00000593044 RRBP1Q9P2E9 1410 aaKnown RBP24.04■■□□□ 1.44
TMC6-224ENST00000593044 SAMD9Q5K651 1589 aa24.04■■□□□ 1.44
TMC6-224ENST00000593044 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
TMC6-224ENST00000593044 IQGAP2Q13576 1575 aa24■■□□□ 1.43
TMC6-224ENST00000593044 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
TMC6-224ENST00000593044 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
TMC6-224ENST00000593044 CFAP43Q8NDM7 1665 aa23.99■■□□□ 1.43
TMC6-224ENST00000593044 FAM50AQ14320 339 aaKnown RBP23.95■■□□□ 1.43
TMC6-224ENST00000593044 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
TMC6-224ENST00000593044 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
TMC6-224ENST00000593044 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
TMC6-224ENST00000593044 GTF3C3Q9Y5Q9 886 aa23.9■■□□□ 1.42
TMC6-224ENST00000593044 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
TMC6-224ENST00000593044 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
TMC6-224ENST00000593044 LRRIQ1Q96JM4 1722 aa23.87■■□□□ 1.41
TMC6-224ENST00000593044 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
TMC6-224ENST00000593044 CENPBP07199 599 aaPredicted RBP23.85■■□□□ 1.41
TMC6-224ENST00000593044 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
TMC6-224ENST00000593044 UGGT2Q9NYU1 1516 aa23.82■■□□□ 1.4
TMC6-224ENST00000593044 YTHDC1Q96MU7 727 aaKnown RBP23.79■■□□□ 1.4
TMC6-224ENST00000593044 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
TMC6-224ENST00000593044 DISP1Q96F81 1524 aa23.77■■□□□ 1.4
TMC6-224ENST00000593044 DHX57Q6P158 1386 aaKnown RBP23.76■■□□□ 1.39
TMC6-224ENST00000593044 KIAA0556O60303 1618 aa23.74■■□□□ 1.39
TMC6-224ENST00000593044 HECW1Q76N89 1606 aa23.73■■□□□ 1.39
TMC6-224ENST00000593044 JPH4Q96JJ6 628 aa23.73■■□□□ 1.39
TMC6-224ENST00000593044 CDK13Q14004 1512 aaKnown RBP23.72■■□□□ 1.39
TMC6-224ENST00000593044 NCOA2Q15596 1464 aa23.72■■□□□ 1.39
TMC6-224ENST00000593044 EPRSP07814 1512 aaKnown RBP23.72■■□□□ 1.39
TMC6-224ENST00000593044 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
TMC6-224ENST00000593044 MAGI3Q5TCQ9 1506 aa23.71■■□□□ 1.39
TMC6-224ENST00000593044 FGD6Q6ZV73 1430 aa23.71■■□□□ 1.39
TMC6-224ENST00000593044 CCDC18Q5T9S5 1454 aa23.71■■□□□ 1.39
TMC6-224ENST00000593044 EHBP1L1Q8N3D4 1523 aa23.67■■□□□ 1.38
TMC6-224ENST00000593044 MIER1Q8N108 512 aa23.66■■□□□ 1.38
TMC6-224ENST00000593044 SUPT6HQ7KZ85 1726 aaKnown RBP23.66■■□□□ 1.38
TMC6-224ENST00000593044 NUP160Q12769 1436 aa23.66■■□□□ 1.38
TMC6-224ENST00000593044 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
TMC6-224ENST00000593044 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
TMC6-224ENST00000593044 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
TMC6-224ENST00000593044 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
TMC6-224ENST00000593044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.59■■□□□ 1.372e-7■■■■□ 20.4
TMC6-224ENST00000593044 NUP153P49790 1475 aaKnown RBP23.59■■□□□ 1.37
TMC6-224ENST00000593044 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.37
TMC6-224ENST00000593044 RAPGEF6Q8TEU7 1601 aa23.57■■□□□ 1.36
TMC6-224ENST00000593044 PTPRKQ15262 1439 aa23.54■■□□□ 1.36
TMC6-224ENST00000593044 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
TMC6-224ENST00000593044 CDK11AQ9UQ88 783 aaPredicted RBP23.52■■□□□ 1.36
TMC6-224ENST00000593044 CHIC2Q9UKJ5 165 aa23.51■■□□□ 1.35
TMC6-224ENST00000593044 PTPN23Q9H3S7 1636 aa23.51■■□□□ 1.35
TMC6-224ENST00000593044 CHD1O14646 1710 aa23.5■■□□□ 1.35
TMC6-224ENST00000593044 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
TMC6-224ENST00000593044 RRP7BPQ9NSQ0 103 aa23.45■■□□□ 1.34
TMC6-224ENST00000593044 MAPKBP1O60336 1514 aa23.43■■□□□ 1.34
TMC6-224ENST00000593044 SIN3AQ96ST3 1273 aa23.41■■□□□ 1.34
TMC6-224ENST00000593044 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
TMC6-224ENST00000593044 PTPRGP23470 1445 aa23.39■■□□□ 1.33
TMC6-224ENST00000593044 HFM1A2PYH4 1435 aa23.38■■□□□ 1.33
TMC6-224ENST00000593044 MIA2Q96PC5 1412 aa23.38■■□□□ 1.33
TMC6-224ENST00000593044 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
TMC6-224ENST00000593044 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
TMC6-224ENST00000593044 NAIPQ13075 1403 aa23.36■■□□□ 1.33
TMC6-224ENST00000593044 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
TMC6-224ENST00000593044 ZNF777Q9ULD5 760 aaPredicted RBP23.35■■□□□ 1.33
TMC6-224ENST00000593044 ABCA8O94911 1581 aa23.33■■□□□ 1.33
TMC6-224ENST00000593044 CFDP1Q9UEE9 299 aaPredicted RBP23.33■■□□□ 1.32
TMC6-224ENST00000593044 ATP10BO94823 1461 aa23.32■■□□□ 1.32
TMC6-224ENST00000593044 KIF14Q15058 1648 aa23.31■■□□□ 1.32
TMC6-224ENST00000593044 TRIM52Q96A61 297 aa23.28■■□□□ 1.32
TMC6-224ENST00000593044 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms