RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 RAPGEF2Q9Y4G8 1499 aa25.75■■□□□ 1.71
TRIM47-206ENST00000592942 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
TRIM47-206ENST00000592942 KIAA0586Q9BVV6 1533 aa25.73■■□□□ 1.71
TRIM47-206ENST00000592942 CSRNP3Q8WYN3 585 aa25.73■■□□□ 1.71
TRIM47-206ENST00000592942 ERCC6L2Q5T890 1561 aa25.72■■□□□ 1.71
TRIM47-206ENST00000592942 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
TRIM47-206ENST00000592942 PRG4Q92954 1404 aaPredicted RBP25.66■■□□□ 1.7
TRIM47-206ENST00000592942 EEA1Q15075 1411 aa25.65■■□□□ 1.7
TRIM47-206ENST00000592942 FAM9AQ8IZU1 332 aaPredicted RBP25.63■■□□□ 1.69
TRIM47-206ENST00000592942 IQGAP2Q13576 1575 aa25.52■■□□□ 1.68
TRIM47-206ENST00000592942 TRHP20396 242 aaPredicted RBP25.52■■□□□ 1.68
TRIM47-206ENST00000592942 UGGT2Q9NYU1 1516 aa25.45■■□□□ 1.66
TRIM47-206ENST00000592942 DISP1Q96F81 1524 aa25.43■■□□□ 1.66
TRIM47-206ENST00000592942 CTTNBP2Q8WZ74 1663 aa25.41■■□□□ 1.66
TRIM47-206ENST00000592942 CARMIL2Q6F5E8 1435 aa25.4■■□□□ 1.66
TRIM47-206ENST00000592942 KIF21BO75037 1637 aa25.37■■□□□ 1.65
TRIM47-206ENST00000592942 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
TRIM47-206ENST00000592942 PTPRGP23470 1445 aa25.36■■□□□ 1.65
TRIM47-206ENST00000592942 TTBK1Q5TCY1 1321 aaPredicted RBP25.3■■□□□ 1.64
TRIM47-206ENST00000592942 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
TRIM47-206ENST00000592942 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
TRIM47-206ENST00000592942 GOLGA3Q08378 1498 aa25.25■■□□□ 1.63
TRIM47-206ENST00000592942 ADCY10Q96PN6 1610 aa25.23■■□□□ 1.63
TRIM47-206ENST00000592942 UBTFP17480 764 aaKnown RBP25.22■■□□□ 1.63
TRIM47-206ENST00000592942 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
TRIM47-206ENST00000592942 UACAQ9BZF9 1416 aa25.18■■□□□ 1.62
TRIM47-206ENST00000592942 RANGAP1P46060 587 aaPredicted RBP25.17■■□□□ 1.62
TRIM47-206ENST00000592942 SAMD9Q5K651 1589 aa25.16■■□□□ 1.62
TRIM47-206ENST00000592942 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
TRIM47-206ENST00000592942 NPM1P06748 294 aaKnown RBP eCLIP25.15■■□□□ 1.62
TRIM47-206ENST00000592942 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
TRIM47-206ENST00000592942 PLB1Q6P1J6 1458 aa25.11■■□□□ 1.61
TRIM47-206ENST00000592942 ABCC2Q92887 1545 aa25.1■■□□□ 1.61
TRIM47-206ENST00000592942 ABCA8O94911 1581 aa25.06■■□□□ 1.6
TRIM47-206ENST00000592942 MAPKBP1O60336 1514 aa25.05■■□□□ 1.6
TRIM47-206ENST00000592942 FHOD3Q2V2M9 1422 aa25.04■■□□□ 1.6
TRIM47-206ENST00000592942 KDM5BQ9UGL1 1544 aa25.04■■□□□ 1.6
TRIM47-206ENST00000592942 EFCAB5A4FU69 1503 aa25.01■■□□□ 1.59
TRIM47-206ENST00000592942 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
TRIM47-206ENST00000592942 ABCC10Q5T3U5 1492 aa24.97■■□□□ 1.59
TRIM47-206ENST00000592942 ASXL2Q76L83 1435 aa24.95■■□□□ 1.59
TRIM47-206ENST00000592942 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.58
TRIM47-206ENST00000592942 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
TRIM47-206ENST00000592942 LOC105371045A0A1W2PR82 267 aa24.93■■□□□ 1.58
TRIM47-206ENST00000592942 KIF13AQ9H1H9 1805 aa24.93■■□□□ 1.58
TRIM47-206ENST00000592942 ATP10BO94823 1461 aa24.91■■□□□ 1.58
TRIM47-206ENST00000592942 RAPGEF6Q8TEU7 1601 aa24.89■■□□□ 1.57
TRIM47-206ENST00000592942 DIP2BQ9P265 1576 aa24.88■■□□□ 1.57
TRIM47-206ENST00000592942 ARID3CA6NKF2 412 aa24.88■■□□□ 1.57
TRIM47-206ENST00000592942 NUP153P49790 1475 aaKnown RBP24.86■■□□□ 1.57
TRIM47-206ENST00000592942 EPRSP07814 1512 aaKnown RBP24.81■■□□□ 1.56
TRIM47-206ENST00000592942 CLIP1P30622 1438 aa24.81■■□□□ 1.56
TRIM47-206ENST00000592942 FMN1Q68DA7 1419 aa24.81■■□□□ 1.56
TRIM47-206ENST00000592942 WDR7Q9Y4E6 1490 aa24.8■■□□□ 1.56
TRIM47-206ENST00000592942 GLI2P10070 1586 aa24.79■■□□□ 1.56
TRIM47-206ENST00000592942 KCNH8Q96L42 1107 aa24.76■■□□□ 1.55
TRIM47-206ENST00000592942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
TRIM47-206ENST00000592942 HNRNPUL2Q1KMD3 747 aaKnown RBP24.73■■□□□ 1.55
TRIM47-206ENST00000592942 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
TRIM47-206ENST00000592942 ATP1B4Q9UN42 357 aaPredicted RBP24.7■■□□□ 1.54
TRIM47-206ENST00000592942 PLEKHD1A6NEE1 506 aa24.67■■□□□ 1.54
TRIM47-206ENST00000592942 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
TRIM47-206ENST00000592942 TSPOAP1O95153 1857 aa24.66■■□□□ 1.54
TRIM47-206ENST00000592942 CASKIN1Q8WXD9 1431 aa24.66■■□□□ 1.54
TRIM47-206ENST00000592942 MAP3K4Q9Y6R4 1608 aa24.65■■□□□ 1.54
TRIM47-206ENST00000592942 PPRC1Q5VV67 1664 aaKnown RBP24.64■■□□□ 1.53
TRIM47-206ENST00000592942 HECW1Q76N89 1606 aa24.63■■□□□ 1.53
TRIM47-206ENST00000592942 CD109Q6YHK3 1445 aa24.61■■□□□ 1.53
TRIM47-206ENST00000592942 LRRIQ1Q96JM4 1722 aa24.6■■□□□ 1.53
TRIM47-206ENST00000592942 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
TRIM47-206ENST00000592942 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
TRIM47-206ENST00000592942 CFAP43Q8NDM7 1665 aa24.55■■□□□ 1.52
TRIM47-206ENST00000592942 MAGI3Q5TCQ9 1506 aa24.55■■□□□ 1.52
TRIM47-206ENST00000592942 ABCA9Q8IUA7 1624 aa24.54■■□□□ 1.52
TRIM47-206ENST00000592942 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
TRIM47-206ENST00000592942 COL17A1Q9UMD9 1497 aaPredicted RBP24.51■■□□□ 1.51
TRIM47-206ENST00000592942 TEX14Q8IWB6 1497 aa24.5■■□□□ 1.51
TRIM47-206ENST00000592942 CCDC18Q5T9S5 1454 aa24.49■■□□□ 1.51
TRIM47-206ENST00000592942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.48■■□□□ 1.51
TRIM47-206ENST00000592942 TROQ12816 1431 aaPredicted RBP24.47■■□□□ 1.51
TRIM47-206ENST00000592942 KDM6BO15054 1643 aa24.44■■□□□ 1.5
TRIM47-206ENST00000592942 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
TRIM47-206ENST00000592942 TTC37Q6PGP7 1564 aa24.41■■□□□ 1.5
TRIM47-206ENST00000592942 KIF14Q15058 1648 aa24.39■■□□□ 1.5
TRIM47-206ENST00000592942 PLCH2O75038 1416 aa24.36■■□□□ 1.49
TRIM47-206ENST00000592942 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
TRIM47-206ENST00000592942 NEO1Q92859 1461 aa24.35■■□□□ 1.49
TRIM47-206ENST00000592942 ARAP3Q8WWN8 1544 aa24.35■■□□□ 1.49
TRIM47-206ENST00000592942 AKNAQ7Z591 1439 aa24.3■■□□□ 1.48
TRIM47-206ENST00000592942 FANCAO15360 1455 aa24.3■■□□□ 1.48
TRIM47-206ENST00000592942 RAPGEF3O95398 923 aa24.28■■□□□ 1.48
TRIM47-206ENST00000592942 KDM4FA0A1W2PPD8 638 aa24.27■■□□□ 1.48
TRIM47-206ENST00000592942 EFCAB2Q5VUJ9 269 aa24.27■■□□□ 1.48
TRIM47-206ENST00000592942 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
TRIM47-206ENST00000592942 MYO5CQ9NQX4 1742 aa24.24■■□□□ 1.47
TRIM47-206ENST00000592942 TIAM1Q13009 1591 aa24.23■■□□□ 1.47
TRIM47-206ENST00000592942 KANK4Q5T7N3 995 aaPredicted RBP24.22■■□□□ 1.47
TRIM47-206ENST00000592942 GPATCH8Q9UKJ3 1502 aaKnown RBP24.21■■□□□ 1.47
TRIM47-206ENST00000592942 CDC42BPBQ9Y5S2 1711 aa24.21■■□□□ 1.47
TRIM47-206ENST00000592942 MAP3K1Q13233 1512 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms