RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 PRXQ9BXM0 1461 aa20.02■□□□□ 0.8
H3F3B-212ENST00000592643 SHROOM2Q13796 1616 aa20.02■□□□□ 0.79
H3F3B-212ENST00000592643 RAPGEF2Q9Y4G8 1499 aa20.01■□□□□ 0.79
H3F3B-212ENST00000592643 KIAA0586Q9BVV6 1533 aa19.99■□□□□ 0.79
H3F3B-212ENST00000592643 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
H3F3B-212ENST00000592643 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
H3F3B-212ENST00000592643 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
H3F3B-212ENST00000592643 PRG4Q92954 1404 aaPredicted RBP19.93■□□□□ 0.78
H3F3B-212ENST00000592643 EEA1Q15075 1411 aa19.92■□□□□ 0.78
H3F3B-212ENST00000592643 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
H3F3B-212ENST00000592643 IQGAP2Q13576 1575 aa19.85■□□□□ 0.77
H3F3B-212ENST00000592643 DISP1Q96F81 1524 aa19.81■□□□□ 0.76
H3F3B-212ENST00000592643 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
H3F3B-212ENST00000592643 KIF21BO75037 1637 aa19.75■□□□□ 0.75
H3F3B-212ENST00000592643 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
H3F3B-212ENST00000592643 CTTNBP2Q8WZ74 1663 aa19.72■□□□□ 0.75
H3F3B-212ENST00000592643 TNIKQ9UKE5 1360 aa19.69■□□□□ 0.74
H3F3B-212ENST00000592643 CARMIL2Q6F5E8 1435 aa19.68■□□□□ 0.74
H3F3B-212ENST00000592643 KIAA0556O60303 1618 aa19.68■□□□□ 0.74
H3F3B-212ENST00000592643 PTPRGP23470 1445 aa19.68■□□□□ 0.74
H3F3B-212ENST00000592643 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
H3F3B-212ENST00000592643 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
H3F3B-212ENST00000592643 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
H3F3B-212ENST00000592643 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
H3F3B-212ENST00000592643 SAMD9Q5K651 1589 aa19.59■□□□□ 0.73
H3F3B-212ENST00000592643 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
H3F3B-212ENST00000592643 UACAQ9BZF9 1416 aa19.55■□□□□ 0.72
H3F3B-212ENST00000592643 UHRF1BP1LA0JNW5 1464 aa19.54■□□□□ 0.72
H3F3B-212ENST00000592643 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
H3F3B-212ENST00000592643 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
H3F3B-212ENST00000592643 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
H3F3B-212ENST00000592643 ABCC2Q92887 1545 aa19.51■□□□□ 0.71
H3F3B-212ENST00000592643 ABCA8O94911 1581 aa19.5■□□□□ 0.71
H3F3B-212ENST00000592643 FHOD3Q2V2M9 1422 aa19.5■□□□□ 0.71
H3F3B-212ENST00000592643 MAPKBP1O60336 1514 aa19.47■□□□□ 0.71
H3F3B-212ENST00000592643 KDM5BQ9UGL1 1544 aa19.47■□□□□ 0.71
H3F3B-212ENST00000592643 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
H3F3B-212ENST00000592643 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
H3F3B-212ENST00000592643 EFCAB5A4FU69 1503 aa19.45■□□□□ 0.7
H3F3B-212ENST00000592643 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
H3F3B-212ENST00000592643 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
H3F3B-212ENST00000592643 ABCC10Q5T3U5 1492 aa19.4■□□□□ 0.7
H3F3B-212ENST00000592643 ASXL2Q76L83 1435 aa19.39■□□□□ 0.69
H3F3B-212ENST00000592643 LOC105371045A0A1W2PR82 267 aa19.38■□□□□ 0.69
H3F3B-212ENST00000592643 ZCCHC11Q5TAX3 1644 aaKnown RBP19.38■□□□□ 0.69
H3F3B-212ENST00000592643 ATP10BO94823 1461 aa19.36■□□□□ 0.69
H3F3B-212ENST00000592643 NUP153P49790 1475 aaKnown RBP19.36■□□□□ 0.69
H3F3B-212ENST00000592643 DIP2BQ9P265 1576 aa19.36■□□□□ 0.69
H3F3B-212ENST00000592643 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
H3F3B-212ENST00000592643 KIF13AQ9H1H9 1805 aa19.34■□□□□ 0.69
H3F3B-212ENST00000592643 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
H3F3B-212ENST00000592643 FAM69CQ0P6D2 419 aa19.32■□□□□ 0.68
H3F3B-212ENST00000592643 CLIP1P30622 1438 aa19.3■□□□□ 0.68
H3F3B-212ENST00000592643 EPRSP07814 1512 aaKnown RBP19.28■□□□□ 0.68
H3F3B-212ENST00000592643 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
H3F3B-212ENST00000592643 FMN1Q68DA7 1419 aa19.26■□□□□ 0.67
H3F3B-212ENST00000592643 GLI2P10070 1586 aa19.25■□□□□ 0.67
H3F3B-212ENST00000592643 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
H3F3B-212ENST00000592643 CDK13Q14004 1512 aaKnown RBP19.21■□□□□ 0.67
H3F3B-212ENST00000592643 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
H3F3B-212ENST00000592643 PCF11O94913 1555 aaKnown RBP19.18■□□□□ 0.66
H3F3B-212ENST00000592643 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
H3F3B-212ENST00000592643 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
H3F3B-212ENST00000592643 MAP3K4Q9Y6R4 1608 aa19.15■□□□□ 0.66
H3F3B-212ENST00000592643 HECW1Q76N89 1606 aa19.14■□□□□ 0.66
H3F3B-212ENST00000592643 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.66
H3F3B-212ENST00000592643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
H3F3B-212ENST00000592643 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
H3F3B-212ENST00000592643 ATP1B4Q9UN42 357 aaPredicted RBP19.12■□□□□ 0.65
H3F3B-212ENST00000592643 FYCO1Q9BQS8 1478 aa19.1■□□□□ 0.65
H3F3B-212ENST00000592643 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
H3F3B-212ENST00000592643 CD109Q6YHK3 1445 aa19.08■□□□□ 0.65
H3F3B-212ENST00000592643 TSPOAP1O95153 1857 aa19.08■□□□□ 0.65
H3F3B-212ENST00000592643 COL17A1Q9UMD9 1497 aaPredicted RBP19.08■□□□□ 0.64
H3F3B-212ENST00000592643 ABCA9Q8IUA7 1624 aa19.07■□□□□ 0.64
H3F3B-212ENST00000592643 MAGI3Q5TCQ9 1506 aa19.07■□□□□ 0.64
H3F3B-212ENST00000592643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.05■□□□□ 0.646e-11■■■□□ 18.3
H3F3B-212ENST00000592643 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
H3F3B-212ENST00000592643 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
H3F3B-212ENST00000592643 TROQ12816 1431 aaPredicted RBP19.02■□□□□ 0.64
H3F3B-212ENST00000592643 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.63
H3F3B-212ENST00000592643 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
H3F3B-212ENST00000592643 KIF14Q15058 1648 aa19■□□□□ 0.63
H3F3B-212ENST00000592643 TEX14Q8IWB6 1497 aa18.99■□□□□ 0.63
H3F3B-212ENST00000592643 CDK11AQ9UQ88 783 aaPredicted RBP18.96■□□□□ 0.63
H3F3B-212ENST00000592643 KDM6BO15054 1643 aa18.96■□□□□ 0.63
H3F3B-212ENST00000592643 PLCH2O75038 1416 aa18.92■□□□□ 0.62
H3F3B-212ENST00000592643 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
H3F3B-212ENST00000592643 NEO1Q92859 1461 aa18.9■□□□□ 0.62
H3F3B-212ENST00000592643 FANCAO15360 1455 aa18.88■□□□□ 0.61
H3F3B-212ENST00000592643 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
H3F3B-212ENST00000592643 AKNAQ7Z591 1439 aa18.86■□□□□ 0.61
H3F3B-212ENST00000592643 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
H3F3B-212ENST00000592643 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
H3F3B-212ENST00000592643 RAPGEF3O95398 923 aa18.84■□□□□ 0.61
H3F3B-212ENST00000592643 FRMPD1Q5SYB0 1578 aa18.84■□□□□ 0.61
H3F3B-212ENST00000592643 MTUS2Q5JR59 1369 aa18.83■□□□□ 0.61
H3F3B-212ENST00000592643 GPATCH8Q9UKJ3 1502 aaKnown RBP18.83■□□□□ 0.6
H3F3B-212ENST00000592643 MAP3K1Q13233 1512 aa18.82■□□□□ 0.6
H3F3B-212ENST00000592643 EHBP1L1Q8N3D4 1523 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms