RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 JPH4Q96JJ6 628 aa24.56■■□□□ 1.52
DDX39A-217ENST00000592391 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
DDX39A-217ENST00000592391 PRG4Q92954 1404 aaPredicted RBP24.52■■□□□ 1.52
DDX39A-217ENST00000592391 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
DDX39A-217ENST00000592391 PRXQ9BXM0 1461 aa24.41■■□□□ 1.5
DDX39A-217ENST00000592391 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
DDX39A-217ENST00000592391 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
DDX39A-217ENST00000592391 EEA1Q15075 1411 aa24.37■■□□□ 1.49
DDX39A-217ENST00000592391 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
DDX39A-217ENST00000592391 CARMIL2Q6F5E8 1435 aa24.29■■□□□ 1.48
DDX39A-217ENST00000592391 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.48
DDX39A-217ENST00000592391 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
DDX39A-217ENST00000592391 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
DDX39A-217ENST00000592391 DISP1Q96F81 1524 aa24.24■■□□□ 1.47
DDX39A-217ENST00000592391 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
DDX39A-217ENST00000592391 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
DDX39A-217ENST00000592391 PTPRGP23470 1445 aa24.22■■□□□ 1.47
DDX39A-217ENST00000592391 KIAA0556O60303 1618 aa24.16■■□□□ 1.46
DDX39A-217ENST00000592391 ADCY10Q96PN6 1610 aa24.15■■□□□ 1.46
DDX39A-217ENST00000592391 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.46
DDX39A-217ENST00000592391 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
DDX39A-217ENST00000592391 KIF21BO75037 1637 aa24.11■■□□□ 1.45
DDX39A-217ENST00000592391 NPM1P06748 294 aaKnown RBP eCLIP24.11■■□□□ 1.45
DDX39A-217ENST00000592391 UACAQ9BZF9 1416 aa24.05■■□□□ 1.44
DDX39A-217ENST00000592391 UHRF1BP1LA0JNW5 1464 aa24.04■■□□□ 1.44
DDX39A-217ENST00000592391 MAPKBP1O60336 1514 aa24.04■■□□□ 1.44
DDX39A-217ENST00000592391 ABCC2Q92887 1545 aa24.01■■□□□ 1.43
DDX39A-217ENST00000592391 SAMD9Q5K651 1589 aa23.96■■□□□ 1.43
DDX39A-217ENST00000592391 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
DDX39A-217ENST00000592391 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
DDX39A-217ENST00000592391 PLB1Q6P1J6 1458 aa23.94■■□□□ 1.42
DDX39A-217ENST00000592391 KDM5BQ9UGL1 1544 aa23.92■■□□□ 1.42
DDX39A-217ENST00000592391 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
DDX39A-217ENST00000592391 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
DDX39A-217ENST00000592391 ABCA8O94911 1581 aa23.91■■□□□ 1.42
DDX39A-217ENST00000592391 KIF13AQ9H1H9 1805 aa23.9■■□□□ 1.42
DDX39A-217ENST00000592391 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.41
DDX39A-217ENST00000592391 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.41
DDX39A-217ENST00000592391 DIP2BQ9P265 1576 aa23.88■■□□□ 1.41
DDX39A-217ENST00000592391 ASXL2Q76L83 1435 aa23.87■■□□□ 1.41
DDX39A-217ENST00000592391 ZCCHC11Q5TAX3 1644 aaKnown RBP23.85■■□□□ 1.41
DDX39A-217ENST00000592391 EFCAB5A4FU69 1503 aa23.84■■□□□ 1.41
DDX39A-217ENST00000592391 FHOD3Q2V2M9 1422 aa23.83■■□□□ 1.4
DDX39A-217ENST00000592391 GLI2P10070 1586 aa23.74■■□□□ 1.39
DDX39A-217ENST00000592391 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
DDX39A-217ENST00000592391 WDR7Q9Y4E6 1490 aa23.74■■□□□ 1.39
DDX39A-217ENST00000592391 EPRSP07814 1512 aaKnown RBP23.74■■□□□ 1.39
DDX39A-217ENST00000592391 ATP10BO94823 1461 aa23.71■■□□□ 1.39
DDX39A-217ENST00000592391 ARHGAP35Q9NRY4 1499 aa23.71■■□□□ 1.39
DDX39A-217ENST00000592391 ARID3CA6NKF2 412 aa23.69■■□□□ 1.38
DDX39A-217ENST00000592391 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
DDX39A-217ENST00000592391 TSPOAP1O95153 1857 aa23.64■■□□□ 1.37
DDX39A-217ENST00000592391 FMN1Q68DA7 1419 aa23.63■■□□□ 1.37
DDX39A-217ENST00000592391 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
DDX39A-217ENST00000592391 MAP3K4Q9Y6R4 1608 aa23.61■■□□□ 1.37
DDX39A-217ENST00000592391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.6■■□□□ 1.37
DDX39A-217ENST00000592391 HNRNPUL2Q1KMD3 747 aaKnown RBP23.6■■□□□ 1.37
DDX39A-217ENST00000592391 PPRC1Q5VV67 1664 aaKnown RBP23.58■■□□□ 1.37
DDX39A-217ENST00000592391 CLIP1P30622 1438 aa23.54■■□□□ 1.36
DDX39A-217ENST00000592391 TEX14Q8IWB6 1497 aa23.53■■□□□ 1.36
DDX39A-217ENST00000592391 CFAP43Q8NDM7 1665 aa23.53■■□□□ 1.36
DDX39A-217ENST00000592391 KDM6BO15054 1643 aa23.52■■□□□ 1.36
DDX39A-217ENST00000592391 CD109Q6YHK3 1445 aa23.52■■□□□ 1.36
DDX39A-217ENST00000592391 HECW1Q76N89 1606 aa23.51■■□□□ 1.35
DDX39A-217ENST00000592391 PLEKHD1A6NEE1 506 aa23.51■■□□□ 1.35
DDX39A-217ENST00000592391 CDK13Q14004 1512 aaKnown RBP23.49■■□□□ 1.35
DDX39A-217ENST00000592391 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
DDX39A-217ENST00000592391 ATP1B4Q9UN42 357 aaPredicted RBP23.49■■□□□ 1.35
DDX39A-217ENST00000592391 ABCA9Q8IUA7 1624 aa23.47■■□□□ 1.35
DDX39A-217ENST00000592391 CASKIN1Q8WXD9 1431 aa23.43■■□□□ 1.34
DDX39A-217ENST00000592391 PCF11O94913 1555 aaKnown RBP23.41■■□□□ 1.34
DDX39A-217ENST00000592391 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
DDX39A-217ENST00000592391 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
DDX39A-217ENST00000592391 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
DDX39A-217ENST00000592391 CDK11AQ9UQ88 783 aaPredicted RBP23.39■■□□□ 1.33
DDX39A-217ENST00000592391 FYCO1Q9BQS8 1478 aa23.37■■□□□ 1.33
DDX39A-217ENST00000592391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.35■■□□□ 1.33
DDX39A-217ENST00000592391 LRRIQ1Q96JM4 1722 aa23.35■■□□□ 1.33
DDX39A-217ENST00000592391 CCDC18Q5T9S5 1454 aa23.35■■□□□ 1.33
DDX39A-217ENST00000592391 PHLDB1Q86UU1 1377 aa23.32■■□□□ 1.32
DDX39A-217ENST00000592391 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
DDX39A-217ENST00000592391 TTC37Q6PGP7 1564 aa23.31■■□□□ 1.32
DDX39A-217ENST00000592391 NEO1Q92859 1461 aa23.3■■□□□ 1.32
DDX39A-217ENST00000592391 ARAP3Q8WWN8 1544 aa23.29■■□□□ 1.32
DDX39A-217ENST00000592391 KIF14Q15058 1648 aa23.26■■□□□ 1.31
DDX39A-217ENST00000592391 FANCAO15360 1455 aa23.24■■□□□ 1.31
DDX39A-217ENST00000592391 PLCH2O75038 1416 aa23.23■■□□□ 1.31
DDX39A-217ENST00000592391 CFAP74Q9C0B2 1584 aa23.21■■□□□ 1.31
DDX39A-217ENST00000592391 AKNAQ7Z591 1439 aa23.2■■□□□ 1.3
DDX39A-217ENST00000592391 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
DDX39A-217ENST00000592391 RAPGEF3O95398 923 aa23.16■■□□□ 1.3
DDX39A-217ENST00000592391 EFCAB2Q5VUJ9 269 aa23.14■■□□□ 1.29
DDX39A-217ENST00000592391 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.29
DDX39A-217ENST00000592391 DENND4BO75064 1496 aaPredicted RBP23.13■■□□□ 1.29
DDX39A-217ENST00000592391 FRMPD1Q5SYB0 1578 aa23.12■■□□□ 1.29
DDX39A-217ENST00000592391 MTUS2Q5JR59 1369 aa23.11■■□□□ 1.29
DDX39A-217ENST00000592391 ADGRL1O94910 1474 aa23.11■■□□□ 1.29
DDX39A-217ENST00000592391 ARHGAP5Q13017 1502 aa23.1■■□□□ 1.29
DDX39A-217ENST00000592391 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
DDX39A-217ENST00000592391 RICTORQ6R327 1708 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 342.3 ms