RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 SHROOM2Q13796 1616 aa13.79□□□□□ -0.2
VAT1-209ENST00000592388 MAPKBP1O60336 1514 aa13.77□□□□□ -0.21
VAT1-209ENST00000592388 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
VAT1-209ENST00000592388 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
VAT1-209ENST00000592388 JPH4Q96JJ6 628 aa13.74□□□□□ -0.21
VAT1-209ENST00000592388 ABCA10Q8WWZ4 1543 aa13.72□□□□□ -0.21
VAT1-209ENST00000592388 ADAMTS12P58397 1594 aa13.71□□□□□ -0.22
VAT1-209ENST00000592388 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
VAT1-209ENST00000592388 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
VAT1-209ENST00000592388 SOCS7O14512 581 aa13.63□□□□□ -0.23
VAT1-209ENST00000592388 ILDR2Q71H61 639 aa13.63□□□□□ -0.23
VAT1-209ENST00000592388 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
VAT1-209ENST00000592388 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
VAT1-209ENST00000592388 PPRC1Q5VV67 1664 aaKnown RBP13.56□□□□□ -0.24
VAT1-209ENST00000592388 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
VAT1-209ENST00000592388 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.241e-6■■■□□ 16.6
VAT1-209ENST00000592388 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
VAT1-209ENST00000592388 ERICH3Q5RHP9 1530 aa13.52□□□□□ -0.25
VAT1-209ENST00000592388 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
VAT1-209ENST00000592388 ASXL2Q76L83 1435 aa13.51□□□□□ -0.25
VAT1-209ENST00000592388 GLI2P10070 1586 aa13.5□□□□□ -0.25
VAT1-209ENST00000592388 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
VAT1-209ENST00000592388 PTPRGP23470 1445 aa13.47□□□□□ -0.25
VAT1-209ENST00000592388 ABCC2Q92887 1545 aa13.46□□□□□ -0.25
VAT1-209ENST00000592388 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
VAT1-209ENST00000592388 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
VAT1-209ENST00000592388 KIAA0586Q9BVV6 1533 aa13.41□□□□□ -0.26
VAT1-209ENST00000592388 MAP3K4Q9Y6R4 1608 aa13.4□□□□□ -0.26
VAT1-209ENST00000592388 CERKQ8TCT0 537 aa13.39□□□□□ -0.27
VAT1-209ENST00000592388 CUL7Q14999 1698 aa13.39□□□□□ -0.27
VAT1-209ENST00000592388 PTPRMP28827 1452 aa13.37□□□□□ -0.27
VAT1-209ENST00000592388 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
VAT1-209ENST00000592388 KIF21BO75037 1637 aa13.36□□□□□ -0.27
VAT1-209ENST00000592388 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
VAT1-209ENST00000592388 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
VAT1-209ENST00000592388 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.28
VAT1-209ENST00000592388 HSPA2P54652 639 aa13.33□□□□□ -0.28
VAT1-209ENST00000592388 UACAQ9BZF9 1416 aa13.32□□□□□ -0.28
VAT1-209ENST00000592388 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
VAT1-209ENST00000592388 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
VAT1-209ENST00000592388 SPATA31D1Q6ZQQ2 1576 aa13.29□□□□□ -0.28
VAT1-209ENST00000592388 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
VAT1-209ENST00000592388 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
VAT1-209ENST00000592388 KCNH8Q96L42 1107 aa13.27□□□□□ -0.29
VAT1-209ENST00000592388 ADAMTSL3P82987 1691 aa13.27□□□□□ -0.29
VAT1-209ENST00000592388 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
VAT1-209ENST00000592388 ZCCHC11Q5TAX3 1644 aaKnown RBP13.25□□□□□ -0.29
VAT1-209ENST00000592388 MAGI3Q5TCQ9 1506 aa13.24□□□□□ -0.29
VAT1-209ENST00000592388 WDR7Q9Y4E6 1490 aa13.24□□□□□ -0.29
VAT1-209ENST00000592388 IGF1RP08069 1367 aa13.24□□□□□ -0.29
VAT1-209ENST00000592388 ARID4BQ4LE39 1312 aaPredicted RBP13.23□□□□□ -0.29
VAT1-209ENST00000592388 MADDQ8WXG6 1647 aa13.21□□□□□ -0.3
VAT1-209ENST00000592388 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
VAT1-209ENST00000592388 CFAP43Q8NDM7 1665 aa13.18□□□□□ -0.3
VAT1-209ENST00000592388 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
VAT1-209ENST00000592388 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
VAT1-209ENST00000592388 ARAP3Q8WWN8 1544 aa13.16□□□□□ -0.3
VAT1-209ENST00000592388 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
VAT1-209ENST00000592388 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
VAT1-209ENST00000592388 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
VAT1-209ENST00000592388 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
VAT1-209ENST00000592388 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
VAT1-209ENST00000592388 ARID3CA6NKF2 412 aa13.05□□□□□ -0.32
VAT1-209ENST00000592388 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
VAT1-209ENST00000592388 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
VAT1-209ENST00000592388 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
VAT1-209ENST00000592388 MLECQ14165 292 aa13.04□□□□□ -0.32
VAT1-209ENST00000592388 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
VAT1-209ENST00000592388 FRMPD1Q5SYB0 1578 aa13□□□□□ -0.33
VAT1-209ENST00000592388 POGZQ7Z3K3 1410 aa12.99□□□□□ -0.33
VAT1-209ENST00000592388 ABCA8O94911 1581 aa12.98□□□□□ -0.33
VAT1-209ENST00000592388 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
VAT1-209ENST00000592388 NEO1Q92859 1461 aa12.97□□□□□ -0.33
VAT1-209ENST00000592388 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
VAT1-209ENST00000592388 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
VAT1-209ENST00000592388 FANCAO15360 1455 aa12.96□□□□□ -0.34
VAT1-209ENST00000592388 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
VAT1-209ENST00000592388 AKNAQ7Z591 1439 aa12.94□□□□□ -0.34
VAT1-209ENST00000592388 LTBP4Q8N2S1 1624 aa12.93□□□□□ -0.34
VAT1-209ENST00000592388 UBAP1LF5GYI3 381 aa12.93□□□□□ -0.34
VAT1-209ENST00000592388 PREX1Q8TCU6 1659 aa12.93□□□□□ -0.34
VAT1-209ENST00000592388 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
VAT1-209ENST00000592388 DENND4BO75064 1496 aaPredicted RBP12.91□□□□□ -0.34
VAT1-209ENST00000592388 ATP10BO94823 1461 aa12.91□□□□□ -0.34
VAT1-209ENST00000592388 SIGLEC1Q9BZZ2 1709 aa12.91□□□□□ -0.34
VAT1-209ENST00000592388 TTC37Q6PGP7 1564 aa12.91□□□□□ -0.34
VAT1-209ENST00000592388 PTPRTO14522 1441 aa12.91□□□□□ -0.34
VAT1-209ENST00000592388 RAPGEF2Q9Y4G8 1499 aa12.91□□□□□ -0.34
VAT1-209ENST00000592388 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
VAT1-209ENST00000592388 UHRF1BP1Q6BDS2 1440 aa12.89□□□□□ -0.35
VAT1-209ENST00000592388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
VAT1-209ENST00000592388 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
VAT1-209ENST00000592388 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
VAT1-209ENST00000592388 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
VAT1-209ENST00000592388 RICTORQ6R327 1708 aa12.87□□□□□ -0.35
VAT1-209ENST00000592388 ZFYVE16Q7Z3T8 1539 aa12.87□□□□□ -0.35
VAT1-209ENST00000592388 MED1Q15648 1581 aaPredicted RBP12.86□□□□□ -0.35
VAT1-209ENST00000592388 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
VAT1-209ENST00000592388 FAM9AQ8IZU1 332 aaPredicted RBP12.85□□□□□ -0.35
VAT1-209ENST00000592388 PHF23Q9BUL5 403 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms