RNA–Protein interactions for RNA: ENST00000592323.5

GRN-219, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-219ENST00000592323 NUP160Q12769 1436 aa25.61■■□□□ 1.69
GRN-219ENST00000592323 CEP170Q5SW79 1584 aa25.6■■□□□ 1.69
GRN-219ENST00000592323 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
GRN-219ENST00000592323 ADAMTS12P58397 1594 aa25.59■■□□□ 1.69
GRN-219ENST00000592323 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
GRN-219ENST00000592323 SHROOM2Q13796 1616 aa25.58■■□□□ 1.69
GRN-219ENST00000592323 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
GRN-219ENST00000592323 KIF21BO75037 1637 aa25.52■■□□□ 1.68
GRN-219ENST00000592323 KIF13AQ9H1H9 1805 aa25.5■■□□□ 1.67
GRN-219ENST00000592323 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
GRN-219ENST00000592323 GOLGA3Q08378 1498 aa25.39■■□□□ 1.65
GRN-219ENST00000592323 PRG4Q92954 1404 aaPredicted RBP25.34■■□□□ 1.65
GRN-219ENST00000592323 JPH4Q96JJ6 628 aa25.28■■□□□ 1.64
GRN-219ENST00000592323 ABCC10Q5T3U5 1492 aa25.26■■□□□ 1.63
GRN-219ENST00000592323 MAPKBP1O60336 1514 aa25.24■■□□□ 1.63
GRN-219ENST00000592323 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
GRN-219ENST00000592323 KIAA0586Q9BVV6 1533 aa25.22■■□□□ 1.63
GRN-219ENST00000592323 TNIKQ9UKE5 1360 aa25.2■■□□□ 1.63
GRN-219ENST00000592323 CTTNBP2Q8WZ74 1663 aa25.2■■□□□ 1.62
GRN-219ENST00000592323 DIP2BQ9P265 1576 aa25.19■■□□□ 1.62
GRN-219ENST00000592323 UBTFP17480 764 aaKnown RBP25.19■■□□□ 1.62
GRN-219ENST00000592323 FAM69CQ0P6D2 419 aa25.18■■□□□ 1.62
GRN-219ENST00000592323 ADCY10Q96PN6 1610 aa25.16■■□□□ 1.62
GRN-219ENST00000592323 EHMT2Q96KQ7 1210 aa25.16■■□□□ 1.62
GRN-219ENST00000592323 IQGAP2Q13576 1575 aa25.13■■□□□ 1.61
GRN-219ENST00000592323 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
GRN-219ENST00000592323 KDM6BO15054 1643 aa25.06■■□□□ 1.6
GRN-219ENST00000592323 UGGT2Q9NYU1 1516 aa25.06■■□□□ 1.6
GRN-219ENST00000592323 KDM4FA0A1W2PPD8 638 aa25.02■■□□□ 1.6
GRN-219ENST00000592323 TSPOAP1O95153 1857 aa25.02■■□□□ 1.6
GRN-219ENST00000592323 CEP162Q5TB80 1403 aa24.96■■□□□ 1.59
GRN-219ENST00000592323 SAMD9Q5K651 1589 aa24.96■■□□□ 1.59
GRN-219ENST00000592323 EFCAB5A4FU69 1503 aa24.96■■□□□ 1.59
GRN-219ENST00000592323 DISP1Q96F81 1524 aa24.94■■□□□ 1.58
GRN-219ENST00000592323 CLIP1P30622 1438 aa24.93■■□□□ 1.58
GRN-219ENST00000592323 ARHGAP35Q9NRY4 1499 aa24.91■■□□□ 1.58
GRN-219ENST00000592323 KIAA0556O60303 1618 aa24.89■■□□□ 1.57
GRN-219ENST00000592323 CARMIL2Q6F5E8 1435 aa24.88■■□□□ 1.57
GRN-219ENST00000592323 PTPRGP23470 1445 aa24.87■■□□□ 1.57
GRN-219ENST00000592323 PPRC1Q5VV67 1664 aaKnown RBP24.85■■□□□ 1.57
GRN-219ENST00000592323 ABCC2Q92887 1545 aa24.85■■□□□ 1.57
GRN-219ENST00000592323 RANGAP1P46060 587 aaPredicted RBP24.84■■□□□ 1.57
GRN-219ENST00000592323 GLI2P10070 1586 aa24.84■■□□□ 1.57
GRN-219ENST00000592323 PLB1Q6P1J6 1458 aa24.79■■□□□ 1.56
GRN-219ENST00000592323 ASXL2Q76L83 1435 aa24.78■■□□□ 1.56
GRN-219ENST00000592323 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
GRN-219ENST00000592323 UHRF1BP1LA0JNW5 1464 aa24.77■■□□□ 1.56
GRN-219ENST00000592323 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
GRN-219ENST00000592323 ILDR1Q86SU0 546 aaPredicted RBP24.7■■□□□ 1.54
GRN-219ENST00000592323 ADGRL1O94910 1474 aa24.7■■□□□ 1.54
GRN-219ENST00000592323 FMN1Q68DA7 1419 aa24.69■■□□□ 1.54
GRN-219ENST00000592323 UACAQ9BZF9 1416 aa24.69■■□□□ 1.54
GRN-219ENST00000592323 MAP3K4Q9Y6R4 1608 aa24.68■■□□□ 1.54
GRN-219ENST00000592323 COL17A1Q9UMD9 1497 aaPredicted RBP24.68■■□□□ 1.54
GRN-219ENST00000592323 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
GRN-219ENST00000592323 KDM5BQ9UGL1 1544 aa24.67■■□□□ 1.54
GRN-219ENST00000592323 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
GRN-219ENST00000592323 EPRSP07814 1512 aaKnown RBP24.65■■□□□ 1.54
GRN-219ENST00000592323 ABCA8O94911 1581 aa24.61■■□□□ 1.53
GRN-219ENST00000592323 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
GRN-219ENST00000592323 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
GRN-219ENST00000592323 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
GRN-219ENST00000592323 RAPGEF6Q8TEU7 1601 aa24.56■■□□□ 1.52
GRN-219ENST00000592323 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
GRN-219ENST00000592323 PCF11O94913 1555 aaKnown RBP24.54■■□□□ 1.52
GRN-219ENST00000592323 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
GRN-219ENST00000592323 HECW1Q76N89 1606 aa24.5■■□□□ 1.51
GRN-219ENST00000592323 NUP153P49790 1475 aaKnown RBP24.49■■□□□ 1.51
GRN-219ENST00000592323 WDR7Q9Y4E6 1490 aa24.47■■□□□ 1.51
GRN-219ENST00000592323 CFAP43Q8NDM7 1665 aa24.42■■□□□ 1.5
GRN-219ENST00000592323 MAP3K1Q13233 1512 aa24.41■■□□□ 1.5
GRN-219ENST00000592323 MAGI3Q5TCQ9 1506 aa24.41■■□□□ 1.5
GRN-219ENST00000592323 CCDC18Q5T9S5 1454 aa24.41■■□□□ 1.5
GRN-219ENST00000592323 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
GRN-219ENST00000592323 ATP10BO94823 1461 aa24.39■■□□□ 1.5
GRN-219ENST00000592323 CD109Q6YHK3 1445 aa24.35■■□□□ 1.49
GRN-219ENST00000592323 ATP1B4Q9UN42 357 aaPredicted RBP24.35■■□□□ 1.49
GRN-219ENST00000592323 CDK13Q14004 1512 aaKnown RBP24.34■■□□□ 1.49
GRN-219ENST00000592323 TIAM1Q13009 1591 aa24.33■■□□□ 1.49
GRN-219ENST00000592323 APLP2Q06481 763 aa24.28■■□□□ 1.48
GRN-219ENST00000592323 ARID3CA6NKF2 412 aa24.27■■□□□ 1.48
GRN-219ENST00000592323 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
GRN-219ENST00000592323 KCNH8Q96L42 1107 aa24.25■■□□□ 1.47
GRN-219ENST00000592323 CDK11AQ9UQ88 783 aaPredicted RBP24.23■■□□□ 1.47
GRN-219ENST00000592323 LRRC9Q6ZRR7 1453 aa24.23■■□□□ 1.47
GRN-219ENST00000592323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.21■■□□□ 1.47
GRN-219ENST00000592323 HNRNPUL2Q1KMD3 747 aaKnown RBP24.21■■□□□ 1.47
GRN-219ENST00000592323 TROQ12816 1431 aaPredicted RBP24.2■■□□□ 1.46
GRN-219ENST00000592323 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.46
GRN-219ENST00000592323 PLEKHD1A6NEE1 506 aa24.19■■□□□ 1.46
GRN-219ENST00000592323 KANK4Q5T7N3 995 aaPredicted RBP24.19■■□□□ 1.46
GRN-219ENST00000592323 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
GRN-219ENST00000592323 ADAMTSL3P82987 1691 aa24.15■■□□□ 1.46
GRN-219ENST00000592323 ABCA9Q8IUA7 1624 aa24.14■■□□□ 1.46
GRN-219ENST00000592323 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
GRN-219ENST00000592323 FBXO41Q8TF61 875 aa24.11■■□□□ 1.45
GRN-219ENST00000592323 PTPRMP28827 1452 aa24.1■■□□□ 1.45
GRN-219ENST00000592323 SUPT6HQ7KZ85 1726 aaKnown RBP24.07■■□□□ 1.44
GRN-219ENST00000592323 KIF14Q15058 1648 aa24.07■■□□□ 1.44
GRN-219ENST00000592323 NCOA2Q15596 1464 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms