RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 CARMIL1Q5VZK9 1371 aa23.22■■□□□ 1.31
RDH13-219ENST00000591960 ERCC6L2Q5T890 1561 aa23.2■■□□□ 1.3
RDH13-219ENST00000591960 KIAA0586Q9BVV6 1533 aa23.11■■□□□ 1.29
RDH13-219ENST00000591960 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
RDH13-219ENST00000591960 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.29
RDH13-219ENST00000591960 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
RDH13-219ENST00000591960 PRXQ9BXM0 1461 aa23.01■■□□□ 1.27
RDH13-219ENST00000591960 IQGAP2Q13576 1575 aa22.97■■□□□ 1.27
RDH13-219ENST00000591960 EEA1Q15075 1411 aa22.92■■□□□ 1.26
RDH13-219ENST00000591960 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
RDH13-219ENST00000591960 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
RDH13-219ENST00000591960 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
RDH13-219ENST00000591960 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
RDH13-219ENST00000591960 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
RDH13-219ENST00000591960 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
RDH13-219ENST00000591960 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
RDH13-219ENST00000591960 KIAA0556O60303 1618 aa22.78■■□□□ 1.24
RDH13-219ENST00000591960 ADCY10Q96PN6 1610 aa22.78■■□□□ 1.24
RDH13-219ENST00000591960 PTPRGP23470 1445 aa22.76■■□□□ 1.23
RDH13-219ENST00000591960 KIF21BO75037 1637 aa22.74■■□□□ 1.23
RDH13-219ENST00000591960 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
RDH13-219ENST00000591960 TTBK1Q5TCY1 1321 aaPredicted RBP22.72■■□□□ 1.23
RDH13-219ENST00000591960 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
RDH13-219ENST00000591960 UACAQ9BZF9 1416 aa22.63■■□□□ 1.21
RDH13-219ENST00000591960 UHRF1BP1LA0JNW5 1464 aa22.62■■□□□ 1.21
RDH13-219ENST00000591960 MAPKBP1O60336 1514 aa22.62■■□□□ 1.21
RDH13-219ENST00000591960 SAMD9Q5K651 1589 aa22.61■■□□□ 1.21
RDH13-219ENST00000591960 ABCC2Q92887 1545 aa22.61■■□□□ 1.21
RDH13-219ENST00000591960 NPM1P06748 294 aaKnown RBP eCLIP22.6■■□□□ 1.21
RDH13-219ENST00000591960 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
RDH13-219ENST00000591960 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
RDH13-219ENST00000591960 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
RDH13-219ENST00000591960 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
RDH13-219ENST00000591960 ABCA8O94911 1581 aa22.54■■□□□ 1.2
RDH13-219ENST00000591960 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
RDH13-219ENST00000591960 ABCC10Q5T3U5 1492 aa22.52■■□□□ 1.2
RDH13-219ENST00000591960 DIP2BQ9P265 1576 aa22.51■■□□□ 1.19
RDH13-219ENST00000591960 ZCCHC11Q5TAX3 1644 aaKnown RBP22.5■■□□□ 1.19
RDH13-219ENST00000591960 RANGAP1P46060 587 aaPredicted RBP22.5■■□□□ 1.19
RDH13-219ENST00000591960 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
RDH13-219ENST00000591960 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
RDH13-219ENST00000591960 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.19
RDH13-219ENST00000591960 EFCAB5A4FU69 1503 aa22.45■■□□□ 1.19
RDH13-219ENST00000591960 FAM69CQ0P6D2 419 aa22.45■■□□□ 1.18
RDH13-219ENST00000591960 RAPGEF6Q8TEU7 1601 aa22.39■■□□□ 1.18
RDH13-219ENST00000591960 ARHGAP35Q9NRY4 1499 aa22.36■■□□□ 1.17
RDH13-219ENST00000591960 GLI2P10070 1586 aa22.36■■□□□ 1.17
RDH13-219ENST00000591960 EPRSP07814 1512 aaKnown RBP22.35■■□□□ 1.17
RDH13-219ENST00000591960 ATP10BO94823 1461 aa22.34■■□□□ 1.17
RDH13-219ENST00000591960 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.17
RDH13-219ENST00000591960 TSPOAP1O95153 1857 aa22.33■■□□□ 1.16
RDH13-219ENST00000591960 NUP153P49790 1475 aaKnown RBP22.32■■□□□ 1.16
RDH13-219ENST00000591960 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
RDH13-219ENST00000591960 PPRC1Q5VV67 1664 aaKnown RBP22.29■■□□□ 1.16
RDH13-219ENST00000591960 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
RDH13-219ENST00000591960 FMN1Q68DA7 1419 aa22.22■■□□□ 1.15
RDH13-219ENST00000591960 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
RDH13-219ENST00000591960 CFAP43Q8NDM7 1665 aa22.18■■□□□ 1.14
RDH13-219ENST00000591960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
RDH13-219ENST00000591960 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
RDH13-219ENST00000591960 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
RDH13-219ENST00000591960 CLIP1P30622 1438 aa22.15■■□□□ 1.14
RDH13-219ENST00000591960 KDM6BO15054 1643 aa22.15■■□□□ 1.14
RDH13-219ENST00000591960 HECW1Q76N89 1606 aa22.15■■□□□ 1.14
RDH13-219ENST00000591960 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
RDH13-219ENST00000591960 ABCA9Q8IUA7 1624 aa22.12■■□□□ 1.13
RDH13-219ENST00000591960 LRRIQ1Q96JM4 1722 aa22.12■■□□□ 1.13
RDH13-219ENST00000591960 TEX14Q8IWB6 1497 aa22.11■■□□□ 1.13
RDH13-219ENST00000591960 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
RDH13-219ENST00000591960 PCF11O94913 1555 aaKnown RBP22.1■■□□□ 1.13
RDH13-219ENST00000591960 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
RDH13-219ENST00000591960 ATP1B4Q9UN42 357 aaPredicted RBP22.07■■□□□ 1.12
RDH13-219ENST00000591960 COL17A1Q9UMD9 1497 aaPredicted RBP22.07■■□□□ 1.12
RDH13-219ENST00000591960 CASKIN1Q8WXD9 1431 aa22.07■■□□□ 1.12
RDH13-219ENST00000591960 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
RDH13-219ENST00000591960 CEP162Q5TB80 1403 aa22.05■■□□□ 1.12
RDH13-219ENST00000591960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
RDH13-219ENST00000591960 FYCO1Q9BQS8 1478 aa22.01■■□□□ 1.11
RDH13-219ENST00000591960 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
RDH13-219ENST00000591960 CCDC18Q5T9S5 1454 aa21.97■■□□□ 1.11
RDH13-219ENST00000591960 KIF14Q15058 1648 aa21.95■■□□□ 1.1
RDH13-219ENST00000591960 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.1
RDH13-219ENST00000591960 CDK11AQ9UQ88 783 aaPredicted RBP21.93■■□□□ 1.1
RDH13-219ENST00000591960 ARAP3Q8WWN8 1544 aa21.92■■□□□ 1.1
RDH13-219ENST00000591960 NEO1Q92859 1461 aa21.91■■□□□ 1.1
RDH13-219ENST00000591960 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
RDH13-219ENST00000591960 FANCAO15360 1455 aa21.86■■□□□ 1.09
RDH13-219ENST00000591960 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
RDH13-219ENST00000591960 PLCH2O75038 1416 aa21.85■■□□□ 1.09
RDH13-219ENST00000591960 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
RDH13-219ENST00000591960 FRMPD1Q5SYB0 1578 aa21.83■■□□□ 1.08
RDH13-219ENST00000591960 AKNAQ7Z591 1439 aa21.83■■□□□ 1.08
RDH13-219ENST00000591960 RAPGEF3O95398 923 aa21.8■■□□□ 1.08
RDH13-219ENST00000591960 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
RDH13-219ENST00000591960 RICTORQ6R327 1708 aa21.78■■□□□ 1.08
RDH13-219ENST00000591960 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
RDH13-219ENST00000591960 PREX2Q70Z35 1606 aa21.76■■□□□ 1.07
RDH13-219ENST00000591960 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
RDH13-219ENST00000591960 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
RDH13-219ENST00000591960 ARHGAP5Q13017 1502 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 234.8 ms