RNA–Protein interactions for RNA: ENST00000591574.5

CYTH1-216, Transcript of cytohesin 1, humanhuman

TSL 3

Gene CYTH1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-216ENST00000591574 RUSC2Q8N2Y8 1516 aa42.18■■■■■ 4.34
CYTH1-216ENST00000591574 CUL7Q14999 1698 aa42.16■■■■■ 4.34
CYTH1-216ENST00000591574 KIAA0586Q9BVV6 1533 aa42.02■■■■■ 4.32
CYTH1-216ENST00000591574 CARMIL1Q5VZK9 1371 aa41.99■■■■■ 4.31
CYTH1-216ENST00000591574 NPM1P06748 294 aaKnown RBP eCLIP41.72■■■■■ 4.27
CYTH1-216ENST00000591574 ADCY10Q96PN6 1610 aa41.67■■■■■ 4.26
CYTH1-216ENST00000591574 IQGAP2Q13576 1575 aa41.66■■■■■ 4.26
CYTH1-216ENST00000591574 RAPGEF2Q9Y4G8 1499 aa41.64■■■■■ 4.26
CYTH1-216ENST00000591574 KIF13AQ9H1H9 1805 aa41.64■■■■■ 4.26
CYTH1-216ENST00000591574 CARMIL2Q6F5E8 1435 aa41.62■■■■■ 4.25
CYTH1-216ENST00000591574 PTPRGP23470 1445 aa41.6■■■■■ 4.25
CYTH1-216ENST00000591574 MAPKBP1O60336 1514 aa41.56■■■■■ 4.24
CYTH1-216ENST00000591574 TTBK1Q5TCY1 1321 aaPredicted RBP41.56■■■■■ 4.24
CYTH1-216ENST00000591574 TNIKQ9UKE5 1360 aa41.54■■■■■ 4.24
CYTH1-216ENST00000591574 ABCC10Q5T3U5 1492 aa41.51■■■■■ 4.24
CYTH1-216ENST00000591574 FAM69CQ0P6D2 419 aa41.5■■■■■ 4.23
CYTH1-216ENST00000591574 DISP1Q96F81 1524 aa41.43■■■■■ 4.22
CYTH1-216ENST00000591574 DIP2BQ9P265 1576 aa41.41■■■■■ 4.22
CYTH1-216ENST00000591574 UGGT2Q9NYU1 1516 aa41.39■■■■■ 4.22
CYTH1-216ENST00000591574 ABCC2Q92887 1545 aa41.33■■■■■ 4.21
CYTH1-216ENST00000591574 UACAQ9BZF9 1416 aa41.28■■■■■ 4.2
CYTH1-216ENST00000591574 CTTNBP2Q8WZ74 1663 aa41.28■■■■■ 4.2
CYTH1-216ENST00000591574 KIAA0556O60303 1618 aa41.27■■■■■ 4.2
CYTH1-216ENST00000591574 UHRF1BP1LA0JNW5 1464 aa41.27■■■■■ 4.2
CYTH1-216ENST00000591574 PRXQ9BXM0 1461 aa41.25■■■■■ 4.19
CYTH1-216ENST00000591574 ASXL2Q76L83 1435 aa41.17■■■■■ 4.18
CYTH1-216ENST00000591574 TSPOAP1O95153 1857 aa41.15■■■■■ 4.18
CYTH1-216ENST00000591574 PLB1Q6P1J6 1458 aa41.15■■■■■ 4.18
CYTH1-216ENST00000591574 AEBP2Q6ZN18 517 aaPredicted RBP41.13■■■■■ 4.17
CYTH1-216ENST00000591574 GOLGA3Q08378 1498 aa41.1■■■■■ 4.17
CYTH1-216ENST00000591574 KDM5BQ9UGL1 1544 aa41.08■■■■■ 4.17
CYTH1-216ENST00000591574 CSRNP3Q8WYN3 585 aa41.04■■■■■ 4.16
CYTH1-216ENST00000591574 ZCCHC11Q5TAX3 1644 aaKnown RBP41.01■■■■■ 4.16
CYTH1-216ENST00000591574 KDM6BO15054 1643 aa41■■■■■ 4.15
CYTH1-216ENST00000591574 GLI2P10070 1586 aa40.99■■■■■ 4.15
CYTH1-216ENST00000591574 EPRSP07814 1512 aaKnown RBP40.91■■■■■ 4.14
CYTH1-216ENST00000591574 EEA1Q15075 1411 aa40.9■■■■■ 4.14
CYTH1-216ENST00000591574 ABCA8O94911 1581 aa40.86■■■■■ 4.13
CYTH1-216ENST00000591574 PPRC1Q5VV67 1664 aaKnown RBP40.85■■■■■ 4.13
CYTH1-216ENST00000591574 WDR7Q9Y4E6 1490 aa40.81■■■■■ 4.12
CYTH1-216ENST00000591574 P3H3Q8IVL6 736 aa40.8■■■■■ 4.12
CYTH1-216ENST00000591574 FAM9AQ8IZU1 332 aaPredicted RBP40.79■■■■■ 4.12
CYTH1-216ENST00000591574 MAP3K4Q9Y6R4 1608 aa40.78■■■■■ 4.12
CYTH1-216ENST00000591574 SAMD9Q5K651 1589 aa40.69■■■■■ 4.1
CYTH1-216ENST00000591574 TEX14Q8IWB6 1497 aa40.68■■■■■ 4.1
CYTH1-216ENST00000591574 KCNH8Q96L42 1107 aa40.65■■■■■ 4.1
CYTH1-216ENST00000591574 ARID3CA6NKF2 412 aa40.6■■■■■ 4.09
CYTH1-216ENST00000591574 RANGAP1P46060 587 aaPredicted RBP40.6■■■■■ 4.09
CYTH1-216ENST00000591574 COL17A1Q9UMD9 1497 aaPredicted RBP40.57■■■■■ 4.08
CYTH1-216ENST00000591574 ATP10BO94823 1461 aa40.55■■■■■ 4.08
CYTH1-216ENST00000591574 CFAP43Q8NDM7 1665 aa40.54■■■■■ 4.08
CYTH1-216ENST00000591574 KIF21BO75037 1637 aa40.54■■■■■ 4.08
CYTH1-216ENST00000591574 CD109Q6YHK3 1445 aa40.54■■■■■ 4.08
CYTH1-216ENST00000591574 RAPGEF6Q8TEU7 1601 aa40.5■■■■■ 4.07
CYTH1-216ENST00000591574 CHIC1Q5VXU3 224 aa40.5■■■■■ 4.07
CYTH1-216ENST00000591574 MAGI3Q5TCQ9 1506 aa40.47■■■■■ 4.07
CYTH1-216ENST00000591574 KDM4FA0A1W2PPD8 638 aa40.46■■■■■ 4.07
CYTH1-216ENST00000591574 FHOD3Q2V2M9 1422 aa40.45■■■■■ 4.07
CYTH1-216ENST00000591574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.38■■■■■ 4.05
CYTH1-216ENST00000591574 HNRNPUL2Q1KMD3 747 aaKnown RBP40.38■■■■■ 4.05
CYTH1-216ENST00000591574 EFCAB5A4FU69 1503 aa40.35■■■■■ 4.05
CYTH1-216ENST00000591574 NUP153P49790 1475 aaKnown RBP40.34■■■■■ 4.05
CYTH1-216ENST00000591574 EHMT2Q96KQ7 1210 aa40.33■■■■■ 4.05
CYTH1-216ENST00000591574 UBTFP17480 764 aaKnown RBP40.29■■■■■ 4.04
CYTH1-216ENST00000591574 ABCA9Q8IUA7 1624 aa40.27■■■■■ 4.04
CYTH1-216ENST00000591574 ADGRL1O94910 1474 aa40.22■■■■■ 4.03
CYTH1-216ENST00000591574 ARAP3Q8WWN8 1544 aa40.16■■■■■ 4.02
CYTH1-216ENST00000591574 PLEKHD1A6NEE1 506 aa40.15■■■■■ 4.02
CYTH1-216ENST00000591574 PHLDB1Q86UU1 1377 aa40.11■■■■■ 4.01
CYTH1-216ENST00000591574 NEO1Q92859 1461 aa40.05■■■■■ 4
CYTH1-216ENST00000591574 ARHGAP35Q9NRY4 1499 aa40.03■■■■■ 4
CYTH1-216ENST00000591574 FMN1Q68DA7 1419 aa40■■■■□ 3.99
CYTH1-216ENST00000591574 CDK13Q14004 1512 aaKnown RBP39.99■■■■□ 3.99
CYTH1-216ENST00000591574 ATP1B4Q9UN42 357 aaPredicted RBP39.97■■■■□ 3.99
CYTH1-216ENST00000591574 RAPGEF3O95398 923 aa39.95■■■■□ 3.99
CYTH1-216ENST00000591574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.93■■■■□ 3.984e-7■■□□□ 13.5
CYTH1-216ENST00000591574 HECW1Q76N89 1606 aa39.91■■■■□ 3.98
CYTH1-216ENST00000591574 TTC37Q6PGP7 1564 aa39.87■■■■□ 3.97
CYTH1-216ENST00000591574 FANCAO15360 1455 aa39.83■■■■□ 3.97
CYTH1-216ENST00000591574 FRMPD1Q5SYB0 1578 aa39.83■■■■□ 3.97
CYTH1-216ENST00000591574 CFAP74Q9C0B2 1584 aa39.82■■■■□ 3.97
CYTH1-216ENST00000591574 AKNAQ7Z591 1439 aa39.82■■■■□ 3.96
CYTH1-216ENST00000591574 CDK11AQ9UQ88 783 aaPredicted RBP39.79■■■■□ 3.96
CYTH1-216ENST00000591574 DENND4BO75064 1496 aaPredicted RBP39.78■■■■□ 3.96
CYTH1-216ENST00000591574 RICTORQ6R327 1708 aa39.71■■■■□ 3.95
CYTH1-216ENST00000591574 PLCH2O75038 1416 aa39.69■■■■□ 3.94
CYTH1-216ENST00000591574 LRRIQ1Q96JM4 1722 aa39.65■■■■□ 3.94
CYTH1-216ENST00000591574 TROQ12816 1431 aaPredicted RBP39.64■■■■□ 3.94
CYTH1-216ENST00000591574 ARID4BQ4LE39 1312 aaPredicted RBP39.63■■■■□ 3.93
CYTH1-216ENST00000591574 ARHGEF40Q8TER5 1519 aa39.62■■■■□ 3.93
CYTH1-216ENST00000591574 KIF14Q15058 1648 aa39.62■■■■□ 3.93
CYTH1-216ENST00000591574 MYO5CQ9NQX4 1742 aa39.61■■■■□ 3.93
CYTH1-216ENST00000591574 CLIP1P30622 1438 aa39.6■■■■□ 3.93
CYTH1-216ENST00000591574 CASKIN1Q8WXD9 1431 aa39.59■■■■□ 3.93
CYTH1-216ENST00000591574 PCF11O94913 1555 aaKnown RBP39.59■■■■□ 3.93
CYTH1-216ENST00000591574 ADAMTSL3P82987 1691 aa39.58■■■■□ 3.93
CYTH1-216ENST00000591574 HECW2Q9P2P5 1572 aa39.58■■■■□ 3.93
CYTH1-216ENST00000591574 EFCAB2Q5VUJ9 269 aa39.57■■■■□ 3.93
CYTH1-216ENST00000591574 SCAPERQ9BY12 1400 aa39.57■■■■□ 3.92
CYTH1-216ENST00000591574 ZMYM4Q5VZL5 1548 aa39.56■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms