RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 CEP170Q5SW79 1584 aa23.75■■□□□ 1.39
NPC1-212ENST00000591107 NUP160Q12769 1436 aa23.65■■□□□ 1.38
NPC1-212ENST00000591107 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
NPC1-212ENST00000591107 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
NPC1-212ENST00000591107 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
NPC1-212ENST00000591107 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
NPC1-212ENST00000591107 PRG4Q92954 1404 aaPredicted RBP23.44■■□□□ 1.34
NPC1-212ENST00000591107 KIF13AQ9H1H9 1805 aa23.34■■□□□ 1.33
NPC1-212ENST00000591107 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
NPC1-212ENST00000591107 CUL7Q14999 1698 aa23.28■■□□□ 1.32
NPC1-212ENST00000591107 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
NPC1-212ENST00000591107 IGF1RP08069 1367 aa23.26■■□□□ 1.31
NPC1-212ENST00000591107 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
NPC1-212ENST00000591107 PIAS4Q8N2W9 510 aaPredicted RBP23.22■■□□□ 1.31
NPC1-212ENST00000591107 KIAA0586Q9BVV6 1533 aa23.21■■□□□ 1.31
NPC1-212ENST00000591107 DIP2BQ9P265 1576 aa23.16■■□□□ 1.3
NPC1-212ENST00000591107 MAPKBP1O60336 1514 aa23.14■■□□□ 1.3
NPC1-212ENST00000591107 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
NPC1-212ENST00000591107 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
NPC1-212ENST00000591107 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
NPC1-212ENST00000591107 FAM69CQ0P6D2 419 aa23.1■■□□□ 1.29
NPC1-212ENST00000591107 IQGAP2Q13576 1575 aa23.06■■□□□ 1.28
NPC1-212ENST00000591107 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
NPC1-212ENST00000591107 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
NPC1-212ENST00000591107 PTPRGP23470 1445 aa23.01■■□□□ 1.27
NPC1-212ENST00000591107 KDM6BO15054 1643 aa22.97■■□□□ 1.27
NPC1-212ENST00000591107 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
NPC1-212ENST00000591107 DISP1Q96F81 1524 aa22.96■■□□□ 1.27
NPC1-212ENST00000591107 CARMIL2Q6F5E8 1435 aa22.95■■□□□ 1.26
NPC1-212ENST00000591107 ABCC2Q92887 1545 aa22.93■■□□□ 1.26
NPC1-212ENST00000591107 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
NPC1-212ENST00000591107 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
NPC1-212ENST00000591107 ASXL2Q76L83 1435 aa22.88■■□□□ 1.25
NPC1-212ENST00000591107 PPRC1Q5VV67 1664 aaKnown RBP22.87■■□□□ 1.25
NPC1-212ENST00000591107 UGGT2Q9NYU1 1516 aa22.87■■□□□ 1.25
NPC1-212ENST00000591107 UACAQ9BZF9 1416 aa22.84■■□□□ 1.25
NPC1-212ENST00000591107 UHRF1BP1LA0JNW5 1464 aa22.84■■□□□ 1.25
NPC1-212ENST00000591107 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
NPC1-212ENST00000591107 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
NPC1-212ENST00000591107 MSH5O43196 834 aa22.81■■□□□ 1.24
NPC1-212ENST00000591107 PLB1Q6P1J6 1458 aa22.79■■□□□ 1.24
NPC1-212ENST00000591107 GLI2P10070 1586 aa22.78■■□□□ 1.24
NPC1-212ENST00000591107 KDM5BQ9UGL1 1544 aa22.77■■□□□ 1.24
NPC1-212ENST00000591107 EPRSP07814 1512 aaKnown RBP22.75■■□□□ 1.23
NPC1-212ENST00000591107 MAP3K4Q9Y6R4 1608 aa22.73■■□□□ 1.23
NPC1-212ENST00000591107 KDM4FA0A1W2PPD8 638 aa22.71■■□□□ 1.23
NPC1-212ENST00000591107 COL17A1Q9UMD9 1497 aaPredicted RBP22.68■■□□□ 1.22
NPC1-212ENST00000591107 PRXQ9BXM0 1461 aa22.67■■□□□ 1.22
NPC1-212ENST00000591107 ABCA8O94911 1581 aa22.65■■□□□ 1.22
NPC1-212ENST00000591107 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
NPC1-212ENST00000591107 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
NPC1-212ENST00000591107 KCNA4P22459 653 aa22.61■■□□□ 1.21
NPC1-212ENST00000591107 ARID3CA6NKF2 412 aa22.58■■□□□ 1.21
NPC1-212ENST00000591107 ADGRL1O94910 1474 aa22.58■■□□□ 1.2
NPC1-212ENST00000591107 TEX14Q8IWB6 1497 aa22.58■■□□□ 1.2
NPC1-212ENST00000591107 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
NPC1-212ENST00000591107 PPP4R3CPQ6ZMV5 832 aa22.53■■□□□ 1.2
NPC1-212ENST00000591107 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
NPC1-212ENST00000591107 KCNH8Q96L42 1107 aa22.51■■□□□ 1.19
NPC1-212ENST00000591107 SAMD9Q5K651 1589 aa22.48■■□□□ 1.19
NPC1-212ENST00000591107 CD109Q6YHK3 1445 aa22.48■■□□□ 1.19
NPC1-212ENST00000591107 MAGI3Q5TCQ9 1506 aa22.45■■□□□ 1.18
NPC1-212ENST00000591107 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
NPC1-212ENST00000591107 ATP10BO94823 1461 aa22.42■■□□□ 1.18
NPC1-212ENST00000591107 RAPGEF6Q8TEU7 1601 aa22.41■■□□□ 1.18
NPC1-212ENST00000591107 KIF21BO75037 1637 aa22.4■■□□□ 1.18
NPC1-212ENST00000591107 CSRNP3Q8WYN3 585 aa22.4■■□□□ 1.18
NPC1-212ENST00000591107 FAM9AQ8IZU1 332 aaPredicted RBP22.38■■□□□ 1.17
NPC1-212ENST00000591107 FHOD3Q2V2M9 1422 aa22.37■■□□□ 1.17
NPC1-212ENST00000591107 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
NPC1-212ENST00000591107 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
NPC1-212ENST00000591107 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.16
NPC1-212ENST00000591107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.28■■□□□ 1.16
NPC1-212ENST00000591107 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
NPC1-212ENST00000591107 EEA1Q15075 1411 aa22.27■■□□□ 1.16
NPC1-212ENST00000591107 ARAP3Q8WWN8 1544 aa22.26■■□□□ 1.15
NPC1-212ENST00000591107 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
NPC1-212ENST00000591107 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
NPC1-212ENST00000591107 RAPGEF3O95398 923 aa22.2■■□□□ 1.14
NPC1-212ENST00000591107 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
NPC1-212ENST00000591107 EFCAB5A4FU69 1503 aa22.17■■□□□ 1.14
NPC1-212ENST00000591107 CDK13Q14004 1512 aaKnown RBP22.17■■□□□ 1.14
NPC1-212ENST00000591107 NEO1Q92859 1461 aa22.16■■□□□ 1.14
NPC1-212ENST00000591107 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
NPC1-212ENST00000591107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.13■■□□□ 1.13
NPC1-212ENST00000591107 ADAMTSL3P82987 1691 aa22.12■■□□□ 1.13
NPC1-212ENST00000591107 ILDR1Q86SU0 546 aaPredicted RBP22.11■■□□□ 1.13
NPC1-212ENST00000591107 ARHGEF40Q8TER5 1519 aa22.11■■□□□ 1.13
NPC1-212ENST00000591107 RICTORQ6R327 1708 aa22.1■■□□□ 1.13
NPC1-212ENST00000591107 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
NPC1-212ENST00000591107 BCORL1Q5H9F3 1711 aa22.08■■□□□ 1.12
NPC1-212ENST00000591107 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
NPC1-212ENST00000591107 FANCAO15360 1455 aa22.07■■□□□ 1.12
NPC1-212ENST00000591107 PTPRMP28827 1452 aa22.06■■□□□ 1.12
NPC1-212ENST00000591107 SIGLEC1Q9BZZ2 1709 aa22.06■■□□□ 1.12
NPC1-212ENST00000591107 PLEKHD1A6NEE1 506 aa22.05■■□□□ 1.12
NPC1-212ENST00000591107 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
NPC1-212ENST00000591107 AKNAQ7Z591 1439 aa22.04■■□□□ 1.12
NPC1-212ENST00000591107 DENND4BO75064 1496 aaPredicted RBP22.03■■□□□ 1.12
NPC1-212ENST00000591107 ARHGAP35Q9NRY4 1499 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms