RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 FHAD1B1AJZ9 1412 aa14.82□□□□□ -0.04
NPC1-211ENST00000591075 KIF27Q86VH2 1401 aa14.8□□□□□ -0.04
NPC1-211ENST00000591075 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
NPC1-211ENST00000591075 GRIN2AQ12879 1464 aa14.78□□□□□ -0.04
NPC1-211ENST00000591075 ADAMTS12P58397 1594 aa14.77□□□□□ -0.04
NPC1-211ENST00000591075 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
NPC1-211ENST00000591075 ARAP1Q96P48 1450 aa14.72□□□□□ -0.05
NPC1-211ENST00000591075 IGF1RP08069 1367 aa14.71□□□□□ -0.06
NPC1-211ENST00000591075 NUP160Q12769 1436 aa14.7□□□□□ -0.06
NPC1-211ENST00000591075 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
NPC1-211ENST00000591075 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
NPC1-211ENST00000591075 POTEHQ6S545 545 aa14.67□□□□□ -0.06
NPC1-211ENST00000591075 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
NPC1-211ENST00000591075 CEP170Q5SW79 1584 aa14.67□□□□□ -0.06
NPC1-211ENST00000591075 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
NPC1-211ENST00000591075 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
NPC1-211ENST00000591075 CUL7Q14999 1698 aa14.63□□□□□ -0.07
NPC1-211ENST00000591075 PRG4Q92954 1404 aaPredicted RBP14.61□□□□□ -0.07
NPC1-211ENST00000591075 EEA1Q15075 1411 aa14.58□□□□□ -0.08
NPC1-211ENST00000591075 KIAA0586Q9BVV6 1533 aa14.57□□□□□ -0.08
NPC1-211ENST00000591075 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
NPC1-211ENST00000591075 ERCC6L2Q5T890 1561 aa14.55□□□□□ -0.08
NPC1-211ENST00000591075 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
NPC1-211ENST00000591075 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
NPC1-211ENST00000591075 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
NPC1-211ENST00000591075 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
NPC1-211ENST00000591075 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
NPC1-211ENST00000591075 CARMIL2Q6F5E8 1435 aa14.5□□□□□ -0.09
NPC1-211ENST00000591075 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
NPC1-211ENST00000591075 PTPRGP23470 1445 aa14.45□□□□□ -0.1
NPC1-211ENST00000591075 IQGAP2Q13576 1575 aa14.45□□□□□ -0.1
NPC1-211ENST00000591075 FAM9AQ8IZU1 332 aaPredicted RBP14.45□□□□□ -0.1
NPC1-211ENST00000591075 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
NPC1-211ENST00000591075 PRXQ9BXM0 1461 aa14.38□□□□□ -0.11
NPC1-211ENST00000591075 FAM69CQ0P6D2 419 aa14.35□□□□□ -0.11
NPC1-211ENST00000591075 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
NPC1-211ENST00000591075 UGGT2Q9NYU1 1516 aa14.35□□□□□ -0.11
NPC1-211ENST00000591075 DISP1Q96F81 1524 aa14.32□□□□□ -0.12
NPC1-211ENST00000591075 RANGAP1P46060 587 aaPredicted RBP14.32□□□□□ -0.12
NPC1-211ENST00000591075 UACAQ9BZF9 1416 aa14.32□□□□□ -0.12
NPC1-211ENST00000591075 ADCY10Q96PN6 1610 aa14.31□□□□□ -0.12
NPC1-211ENST00000591075 CTTNBP2Q8WZ74 1663 aa14.31□□□□□ -0.12
NPC1-211ENST00000591075 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
NPC1-211ENST00000591075 EHMT2Q96KQ7 1210 aa14.3□□□□□ -0.12
NPC1-211ENST00000591075 P3H3Q8IVL6 736 aa14.29□□□□□ -0.12
NPC1-211ENST00000591075 KIAA0556O60303 1618 aa14.28□□□□□ -0.12
NPC1-211ENST00000591075 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
NPC1-211ENST00000591075 MAPKBP1O60336 1514 aa14.27□□□□□ -0.12
NPC1-211ENST00000591075 ABCC2Q92887 1545 aa14.27□□□□□ -0.12
NPC1-211ENST00000591075 KIF21BO75037 1637 aa14.26□□□□□ -0.13
NPC1-211ENST00000591075 ABCC10Q5T3U5 1492 aa14.26□□□□□ -0.13
NPC1-211ENST00000591075 UHRF1BP1LA0JNW5 1464 aa14.25□□□□□ -0.13
NPC1-211ENST00000591075 PLB1Q6P1J6 1458 aa14.24□□□□□ -0.13
NPC1-211ENST00000591075 ASXL2Q76L83 1435 aa14.22□□□□□ -0.13
NPC1-211ENST00000591075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
NPC1-211ENST00000591075 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
NPC1-211ENST00000591075 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
NPC1-211ENST00000591075 DIP2BQ9P265 1576 aa14.18□□□□□ -0.14
NPC1-211ENST00000591075 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
NPC1-211ENST00000591075 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
NPC1-211ENST00000591075 KDM5BQ9UGL1 1544 aa14.18□□□□□ -0.14
NPC1-211ENST00000591075 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
NPC1-211ENST00000591075 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
NPC1-211ENST00000591075 ABCA8O94911 1581 aa14.13□□□□□ -0.15
NPC1-211ENST00000591075 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
NPC1-211ENST00000591075 ATP1B4Q9UN42 357 aaPredicted RBP14.12□□□□□ -0.15
NPC1-211ENST00000591075 FHOD3Q2V2M9 1422 aa14.12□□□□□ -0.15
NPC1-211ENST00000591075 WDR7Q9Y4E6 1490 aa14.12□□□□□ -0.15
NPC1-211ENST00000591075 EPRSP07814 1512 aaKnown RBP14.11□□□□□ -0.15
NPC1-211ENST00000591075 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
NPC1-211ENST00000591075 EFCAB5A4FU69 1503 aa14.09□□□□□ -0.15
NPC1-211ENST00000591075 GLI2P10070 1586 aa14.09□□□□□ -0.15
NPC1-211ENST00000591075 ATP10BO94823 1461 aa14.06□□□□□ -0.16
NPC1-211ENST00000591075 TEX14Q8IWB6 1497 aa14.06□□□□□ -0.16
NPC1-211ENST00000591075 PLEKHD1A6NEE1 506 aa14.06□□□□□ -0.16
NPC1-211ENST00000591075 KDM6BO15054 1643 aa14.05□□□□□ -0.16
NPC1-211ENST00000591075 RAPGEF6Q8TEU7 1601 aa14.05□□□□□ -0.16
NPC1-211ENST00000591075 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
NPC1-211ENST00000591075 FMN1Q68DA7 1419 aa14.03□□□□□ -0.16
NPC1-211ENST00000591075 CDK11AQ9UQ88 783 aaPredicted RBP14.01□□□□□ -0.17
NPC1-211ENST00000591075 NUP153P49790 1475 aaKnown RBP14□□□□□ -0.17
NPC1-211ENST00000591075 CEP162Q5TB80 1403 aa13.99□□□□□ -0.17
NPC1-211ENST00000591075 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
NPC1-211ENST00000591075 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
NPC1-211ENST00000591075 CLIP1P30622 1438 aa13.98□□□□□ -0.17
NPC1-211ENST00000591075 MAGI3Q5TCQ9 1506 aa13.96□□□□□ -0.17
NPC1-211ENST00000591075 CFAP43Q8NDM7 1665 aa13.96□□□□□ -0.17
NPC1-211ENST00000591075 PPRC1Q5VV67 1664 aaKnown RBP13.95□□□□□ -0.18
NPC1-211ENST00000591075 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
NPC1-211ENST00000591075 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
NPC1-211ENST00000591075 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
NPC1-211ENST00000591075 COL17A1Q9UMD9 1497 aaPredicted RBP13.89□□□□□ -0.19
NPC1-211ENST00000591075 ABCA9Q8IUA7 1624 aa13.89□□□□□ -0.19
NPC1-211ENST00000591075 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
NPC1-211ENST00000591075 CASKIN1Q8WXD9 1431 aa13.86□□□□□ -0.19
NPC1-211ENST00000591075 NEO1Q92859 1461 aa13.86□□□□□ -0.19
NPC1-211ENST00000591075 RAPGEF3O95398 923 aa13.85□□□□□ -0.19
NPC1-211ENST00000591075 EFCAB2Q5VUJ9 269 aa13.84□□□□□ -0.19
NPC1-211ENST00000591075 CCDC18Q5T9S5 1454 aa13.84□□□□□ -0.19
NPC1-211ENST00000591075 ARAP3Q8WWN8 1544 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms