RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 CEP170Q5SW79 1584 aa30.66■■■□□ 2.5
SPHK1-207ENST00000590959 HRCP23327 699 aa30.66■■■□□ 2.5
SPHK1-207ENST00000590959 CLIP1P30622 1438 aa30.64■■■□□ 2.5
SPHK1-207ENST00000590959 NUP160Q12769 1436 aa30.63■■■□□ 2.49
SPHK1-207ENST00000590959 OSCARQ8IYS5 282 aa30.56■■■□□ 2.48
SPHK1-207ENST00000590959 CTTNBP2Q8WZ74 1663 aa30.52■■■□□ 2.48
SPHK1-207ENST00000590959 RANGAP1P46060 587 aaPredicted RBP30.5■■■□□ 2.47
SPHK1-207ENST00000590959 KIAA0586Q9BVV6 1533 aa30.5■■■□□ 2.47
SPHK1-207ENST00000590959 CLASP1Q7Z460 1538 aa30.46■■■□□ 2.47
SPHK1-207ENST00000590959 IQGAP2Q13576 1575 aa30.44■■■□□ 2.46
SPHK1-207ENST00000590959 JPH4Q96JJ6 628 aa30.4■■■□□ 2.46
SPHK1-207ENST00000590959 VPS8Q8N3P4 1428 aa30.37■■■□□ 2.45
SPHK1-207ENST00000590959 ARHGAP35Q9NRY4 1499 aa30.32■■■□□ 2.44
SPHK1-207ENST00000590959 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
SPHK1-207ENST00000590959 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
SPHK1-207ENST00000590959 UGGT2Q9NYU1 1516 aa30.29■■■□□ 2.44
SPHK1-207ENST00000590959 P3H3Q8IVL6 736 aa30.26■■■□□ 2.43
SPHK1-207ENST00000590959 PRG4Q92954 1404 aaPredicted RBP30.25■■■□□ 2.43
SPHK1-207ENST00000590959 DISP1Q96F81 1524 aa30.24■■■□□ 2.43
SPHK1-207ENST00000590959 PCGF6Q9BYE7 350 aa30.24■■■□□ 2.43
SPHK1-207ENST00000590959 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
SPHK1-207ENST00000590959 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
SPHK1-207ENST00000590959 EFCAB5A4FU69 1503 aa30.19■■■□□ 2.42
SPHK1-207ENST00000590959 SAMD9Q5K651 1589 aa30.18■■■□□ 2.42
SPHK1-207ENST00000590959 PPARGC1BQ86YN6 1023 aaKnown RBP30.16■■■□□ 2.42
SPHK1-207ENST00000590959 KIAA0556O60303 1618 aa30.16■■■□□ 2.42
SPHK1-207ENST00000590959 FHOD3Q2V2M9 1422 aa30.13■■■□□ 2.41
SPHK1-207ENST00000590959 CARMIL2Q6F5E8 1435 aa30.11■■■□□ 2.41
SPHK1-207ENST00000590959 APLP2Q06481 763 aa30.11■■■□□ 2.41
SPHK1-207ENST00000590959 TTBK1Q5TCY1 1321 aaPredicted RBP30.11■■■□□ 2.41
SPHK1-207ENST00000590959 ARHGEF11O15085 1522 aa30.06■■■□□ 2.4
SPHK1-207ENST00000590959 RIMBP3CA6NJZ7 1639 aa29.99■■■□□ 2.39
SPHK1-207ENST00000590959 RIMBP3BA6NNM3 1639 aa29.99■■■□□ 2.39
SPHK1-207ENST00000590959 RIMBP3Q9UFD9 1639 aa29.99■■■□□ 2.39
SPHK1-207ENST00000590959 PTPRGP23470 1445 aa29.96■■■□□ 2.39
SPHK1-207ENST00000590959 FMN1Q68DA7 1419 aa29.95■■■□□ 2.38
SPHK1-207ENST00000590959 DNAJC5Q9H3Z4 198 aa29.93■■■□□ 2.38
SPHK1-207ENST00000590959 PLB1Q6P1J6 1458 aa29.88■■■□□ 2.37
SPHK1-207ENST00000590959 PCF11O94913 1555 aaKnown RBP29.87■■■□□ 2.37
SPHK1-207ENST00000590959 CASKIN1Q8WXD9 1431 aa29.86■■■□□ 2.37
SPHK1-207ENST00000590959 FYCO1Q9BQS8 1478 aa29.85■■■□□ 2.37
SPHK1-207ENST00000590959 MAP3K1Q13233 1512 aa29.84■■■□□ 2.37
SPHK1-207ENST00000590959 CYB5RLQ6IPT4 315 aa29.84■■■□□ 2.37
SPHK1-207ENST00000590959 ATP1B4Q9UN42 357 aaPredicted RBP29.78■■■□□ 2.36
SPHK1-207ENST00000590959 KANK4Q5T7N3 995 aaPredicted RBP29.78■■■□□ 2.36
SPHK1-207ENST00000590959 ABCA8O94911 1581 aa29.78■■■□□ 2.36
SPHK1-207ENST00000590959 TIAM1Q13009 1591 aa29.78■■■□□ 2.36
SPHK1-207ENST00000590959 UACAQ9BZF9 1416 aa29.77■■■□□ 2.36
SPHK1-207ENST00000590959 ARID3CA6NKF2 412 aa29.76■■■□□ 2.35
SPHK1-207ENST00000590959 RAPGEF6Q8TEU7 1601 aa29.75■■■□□ 2.35
SPHK1-207ENST00000590959 NUP153P49790 1475 aaKnown RBP29.7■■■□□ 2.35
SPHK1-207ENST00000590959 ADCY10Q96PN6 1610 aa29.7■■■□□ 2.34
SPHK1-207ENST00000590959 CFAP43Q8NDM7 1665 aa29.7■■■□□ 2.34
SPHK1-207ENST00000590959 ZEB1P37275 1124 aaPredicted RBP29.68■■■□□ 2.34
SPHK1-207ENST00000590959 ABCC2Q92887 1545 aa29.68■■■□□ 2.34
SPHK1-207ENST00000590959 LRRIQ1Q96JM4 1722 aa29.67■■■□□ 2.34
SPHK1-207ENST00000590959 LRRC9Q6ZRR7 1453 aa29.65■■■□□ 2.34
SPHK1-207ENST00000590959 UHRF1BP1LA0JNW5 1464 aa29.64■■■□□ 2.34
SPHK1-207ENST00000590959 HECW1Q76N89 1606 aa29.63■■■□□ 2.33
SPHK1-207ENST00000590959 CDK13Q14004 1512 aaKnown RBP29.61■■■□□ 2.33
SPHK1-207ENST00000590959 EPRSP07814 1512 aaKnown RBP29.6■■■□□ 2.33
SPHK1-207ENST00000590959 ATP10BO94823 1461 aa29.6■■■□□ 2.33
SPHK1-207ENST00000590959 CCDC18Q5T9S5 1454 aa29.57■■■□□ 2.32
SPHK1-207ENST00000590959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.55■■■□□ 2.32
SPHK1-207ENST00000590959 HNRNPUL2Q1KMD3 747 aaKnown RBP29.55■■■□□ 2.32
SPHK1-207ENST00000590959 KDM5BQ9UGL1 1544 aa29.55■■■□□ 2.32
SPHK1-207ENST00000590959 ZCCHC11Q5TAX3 1644 aaKnown RBP29.52■■■□□ 2.32
SPHK1-207ENST00000590959 MTUS2Q5JR59 1369 aa29.48■■■□□ 2.31
SPHK1-207ENST00000590959 RRBP1Q9P2E9 1410 aaKnown RBP29.45■■■□□ 2.3
SPHK1-207ENST00000590959 NPM1P06748 294 aaKnown RBP eCLIP29.44■■■□□ 2.3
SPHK1-207ENST00000590959 MAGI3Q5TCQ9 1506 aa29.44■■■□□ 2.3
SPHK1-207ENST00000590959 EHBP1L1Q8N3D4 1523 aa29.4■■■□□ 2.3
SPHK1-207ENST00000590959 PHLDB1Q86UU1 1377 aa29.38■■■□□ 2.29
SPHK1-207ENST00000590959 CCNB3Q8WWL7 1395 aa29.37■■■□□ 2.29
SPHK1-207ENST00000590959 PLEKHD1A6NEE1 506 aa29.37■■■□□ 2.29
SPHK1-207ENST00000590959 ASXL2Q76L83 1435 aa29.36■■■□□ 2.29
SPHK1-207ENST00000590959 CDK11AQ9UQ88 783 aaPredicted RBP29.34■■■□□ 2.29
SPHK1-207ENST00000590959 SUPT6HQ7KZ85 1726 aaKnown RBP29.31■■■□□ 2.28
SPHK1-207ENST00000590959 KCNH8Q96L42 1107 aa29.3■■■□□ 2.28
SPHK1-207ENST00000590959 TROQ12816 1431 aaPredicted RBP29.3■■■□□ 2.28
SPHK1-207ENST00000590959 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
SPHK1-207ENST00000590959 MAPKBP1O60336 1514 aa29.28■■■□□ 2.28
SPHK1-207ENST00000590959 WDR7Q9Y4E6 1490 aa29.28■■■□□ 2.28
SPHK1-207ENST00000590959 KIF14Q15058 1648 aa29.23■■■□□ 2.27
SPHK1-207ENST00000590959 MYOM3Q5VTT5 1437 aa29.19■■■□□ 2.26
SPHK1-207ENST00000590959 FGD6Q6ZV73 1430 aa29.18■■■□□ 2.26
SPHK1-207ENST00000590959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.16■■■□□ 2.26
SPHK1-207ENST00000590959 FAM50AQ14320 339 aaKnown RBP29.15■■■□□ 2.26
SPHK1-207ENST00000590959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.14■■■□□ 2.25
SPHK1-207ENST00000590959 ABCC10Q5T3U5 1492 aa29.11■■■□□ 2.25
SPHK1-207ENST00000590959 TTC37Q6PGP7 1564 aa29.1■■■□□ 2.25
SPHK1-207ENST00000590959 FAM69CQ0P6D2 419 aa29.08■■■□□ 2.25
SPHK1-207ENST00000590959 DIP2BQ9P265 1576 aa29.08■■■□□ 2.25
SPHK1-207ENST00000590959 ITGAEP38570 1179 aa29.08■■■□□ 2.25
SPHK1-207ENST00000590959 MIA2Q96PC5 1412 aa29.04■■■□□ 2.24
SPHK1-207ENST00000590959 ABCA9Q8IUA7 1624 aa29.04■■■□□ 2.24
SPHK1-207ENST00000590959 CCER1Q8TC90 406 aaPredicted RBP29.02■■■□□ 2.24
SPHK1-207ENST00000590959 KIF13AQ9H1H9 1805 aa29.02■■■□□ 2.24
SPHK1-207ENST00000590959 GPATCH8Q9UKJ3 1502 aaKnown RBP29.02■■■□□ 2.24
SPHK1-207ENST00000590959 PTPN23Q9H3S7 1636 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms