RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 IGF1RP08069 1367 aa38.04■■■■□ 3.68
DDX39A-215ENST00000590696 CUL7Q14999 1698 aa37.93■■■■□ 3.66
DDX39A-215ENST00000590696 KIAA0586Q9BVV6 1533 aa37.89■■■■□ 3.66
DDX39A-215ENST00000590696 CARMIL1Q5VZK9 1371 aa37.79■■■■□ 3.64
DDX39A-215ENST00000590696 NPM1P06748 294 aaKnown RBP eCLIP37.74■■■■□ 3.63
DDX39A-215ENST00000590696 KIF13AQ9H1H9 1805 aa37.73■■■■□ 3.63
DDX39A-215ENST00000590696 ADCY10Q96PN6 1610 aa37.67■■■■□ 3.62
DDX39A-215ENST00000590696 FAM69CQ0P6D2 419 aa37.61■■■■□ 3.61
DDX39A-215ENST00000590696 MAPKBP1O60336 1514 aa37.61■■■■□ 3.61
DDX39A-215ENST00000590696 ABCC10Q5T3U5 1492 aa37.6■■■■□ 3.61
DDX39A-215ENST00000590696 PTPRGP23470 1445 aa37.55■■■■□ 3.6
DDX39A-215ENST00000590696 AEBP2Q6ZN18 517 aaPredicted RBP37.55■■■■□ 3.6
DDX39A-215ENST00000590696 TTBK1Q5TCY1 1321 aaPredicted RBP37.53■■■■□ 3.6
DDX39A-215ENST00000590696 CARMIL2Q6F5E8 1435 aa37.53■■■■□ 3.6
DDX39A-215ENST00000590696 IQGAP2Q13576 1575 aa37.51■■■■□ 3.6
DDX39A-215ENST00000590696 DIP2BQ9P265 1576 aa37.49■■■■□ 3.59
DDX39A-215ENST00000590696 TNIKQ9UKE5 1360 aa37.48■■■■□ 3.59
DDX39A-215ENST00000590696 RAPGEF2Q9Y4G8 1499 aa37.44■■■■□ 3.58
DDX39A-215ENST00000590696 DISP1Q96F81 1524 aa37.35■■■■□ 3.57
DDX39A-215ENST00000590696 ABCC2Q92887 1545 aa37.33■■■■□ 3.57
DDX39A-215ENST00000590696 UGGT2Q9NYU1 1516 aa37.28■■■■□ 3.56
DDX39A-215ENST00000590696 UACAQ9BZF9 1416 aa37.26■■■■□ 3.55
DDX39A-215ENST00000590696 UHRF1BP1LA0JNW5 1464 aa37.26■■■■□ 3.55
DDX39A-215ENST00000590696 TSPOAP1O95153 1857 aa37.24■■■■□ 3.55
DDX39A-215ENST00000590696 ASXL2Q76L83 1435 aa37.2■■■■□ 3.55
DDX39A-215ENST00000590696 PLB1Q6P1J6 1458 aa37.18■■■■□ 3.54
DDX39A-215ENST00000590696 KIAA0556O60303 1618 aa37.18■■■■□ 3.54
DDX39A-215ENST00000590696 KDM6BO15054 1643 aa37.17■■■■□ 3.54
DDX39A-215ENST00000590696 CTTNBP2Q8WZ74 1663 aa37.11■■■■□ 3.53
DDX39A-215ENST00000590696 KDM5BQ9UGL1 1544 aa37.1■■■■□ 3.53
DDX39A-215ENST00000590696 GLI2P10070 1586 aa37.08■■■■□ 3.53
DDX39A-215ENST00000590696 PRXQ9BXM0 1461 aa37.05■■■■□ 3.52
DDX39A-215ENST00000590696 ZCCHC11Q5TAX3 1644 aaKnown RBP37.02■■■■□ 3.52
DDX39A-215ENST00000590696 GOLGA3Q08378 1498 aa36.99■■■■□ 3.51
DDX39A-215ENST00000590696 PPRC1Q5VV67 1664 aaKnown RBP36.99■■■■□ 3.51
DDX39A-215ENST00000590696 EPRSP07814 1512 aaKnown RBP36.98■■■■□ 3.51
DDX39A-215ENST00000590696 MAP3K4Q9Y6R4 1608 aa36.88■■■■□ 3.49
DDX39A-215ENST00000590696 ABCA8O94911 1581 aa36.84■■■■□ 3.49
DDX39A-215ENST00000590696 WDR7Q9Y4E6 1490 aa36.83■■■■□ 3.49
DDX39A-215ENST00000590696 KDM4FA0A1W2PPD8 638 aa36.82■■■■□ 3.48
DDX39A-215ENST00000590696 CSRNP3Q8WYN3 585 aa36.81■■■■□ 3.48
DDX39A-215ENST00000590696 TEX14Q8IWB6 1497 aa36.78■■■■□ 3.48
DDX39A-215ENST00000590696 COL17A1Q9UMD9 1497 aaPredicted RBP36.75■■■■□ 3.47
DDX39A-215ENST00000590696 P3H3Q8IVL6 736 aa36.74■■■■□ 3.47
DDX39A-215ENST00000590696 KCNH8Q96L42 1107 aa36.71■■■■□ 3.47
DDX39A-215ENST00000590696 FAM9AQ8IZU1 332 aaPredicted RBP36.7■■■■□ 3.47
DDX39A-215ENST00000590696 CD109Q6YHK3 1445 aa36.63■■■■□ 3.45
DDX39A-215ENST00000590696 EEA1Q15075 1411 aa36.61■■■■□ 3.45
DDX39A-215ENST00000590696 ARID3CA6NKF2 412 aa36.61■■■■□ 3.45
DDX39A-215ENST00000590696 CFAP43Q8NDM7 1665 aa36.61■■■■□ 3.45
DDX39A-215ENST00000590696 SAMD9Q5K651 1589 aa36.58■■■■□ 3.45
DDX39A-215ENST00000590696 MAGI3Q5TCQ9 1506 aa36.58■■■■□ 3.45
DDX39A-215ENST00000590696 ATP10BO94823 1461 aa36.56■■■■□ 3.44
DDX39A-215ENST00000590696 ADGRL1O94910 1474 aa36.51■■■■□ 3.44
DDX39A-215ENST00000590696 RANGAP1P46060 587 aaPredicted RBP36.48■■■■□ 3.43
DDX39A-215ENST00000590696 RAPGEF6Q8TEU7 1601 aa36.45■■■■□ 3.43
DDX39A-215ENST00000590696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.39■■■■□ 3.42
DDX39A-215ENST00000590696 HNRNPUL2Q1KMD3 747 aaKnown RBP36.39■■■■□ 3.42
DDX39A-215ENST00000590696 FHOD3Q2V2M9 1422 aa36.37■■■■□ 3.41
DDX39A-215ENST00000590696 ABCA9Q8IUA7 1624 aa36.34■■■■□ 3.41
DDX39A-215ENST00000590696 NUP153P49790 1475 aaKnown RBP36.32■■■■□ 3.41
DDX39A-215ENST00000590696 KIF21BO75037 1637 aa36.32■■■■□ 3.4
DDX39A-215ENST00000590696 ARAP3Q8WWN8 1544 aa36.29■■■■□ 3.4
DDX39A-215ENST00000590696 PHLDB1Q86UU1 1377 aa36.23■■■■□ 3.39
DDX39A-215ENST00000590696 EFCAB5A4FU69 1503 aa36.22■■■■□ 3.39
DDX39A-215ENST00000590696 PLEKHD1A6NEE1 506 aa36.17■■■■□ 3.38
DDX39A-215ENST00000590696 EHMT2Q96KQ7 1210 aa36.16■■■■□ 3.38
DDX39A-215ENST00000590696 CHIC1Q5VXU3 224 aa36.15■■■■□ 3.38
DDX39A-215ENST00000590696 NEO1Q92859 1461 aa36.15■■■■□ 3.38
DDX39A-215ENST00000590696 RAPGEF3O95398 923 aa36.13■■■■□ 3.37
DDX39A-215ENST00000590696 UBTFP17480 764 aaKnown RBP36.11■■■■□ 3.37
DDX39A-215ENST00000590696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.99■■■■□ 3.352e-7■□□□□ 10.7
DDX39A-215ENST00000590696 FRMPD1Q5SYB0 1578 aa35.99■■■■□ 3.35
DDX39A-215ENST00000590696 HECW2Q9P2P5 1572 aa35.99■■■■□ 3.35
DDX39A-215ENST00000590696 CDK13Q14004 1512 aaKnown RBP35.98■■■■□ 3.35
DDX39A-215ENST00000590696 AKNAQ7Z591 1439 aa35.94■■■■□ 3.34
DDX39A-215ENST00000590696 FANCAO15360 1455 aa35.93■■■■□ 3.34
DDX39A-215ENST00000590696 ARHGAP35Q9NRY4 1499 aa35.93■■■■□ 3.34
DDX39A-215ENST00000590696 ATP1B4Q9UN42 357 aaPredicted RBP35.93■■■■□ 3.34
DDX39A-215ENST00000590696 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
DDX39A-215ENST00000590696 FMN1Q68DA7 1419 aa35.92■■■■□ 3.34
DDX39A-215ENST00000590696 DENND4BO75064 1496 aaPredicted RBP35.92■■■■□ 3.34
DDX39A-215ENST00000590696 CFAP74Q9C0B2 1584 aa35.89■■■■□ 3.34
DDX39A-215ENST00000590696 HECW1Q76N89 1606 aa35.86■■■■□ 3.33
DDX39A-215ENST00000590696 RICTORQ6R327 1708 aa35.86■■■■□ 3.33
DDX39A-215ENST00000590696 ARID4BQ4LE39 1312 aaPredicted RBP35.85■■■■□ 3.33
DDX39A-215ENST00000590696 ADAMTSL3P82987 1691 aa35.85■■■■□ 3.33
DDX39A-215ENST00000590696 BCORL1Q5H9F3 1711 aa35.79■■■■□ 3.32
DDX39A-215ENST00000590696 PTPRMP28827 1452 aa35.79■■■■□ 3.32
DDX39A-215ENST00000590696 ARHGEF40Q8TER5 1519 aa35.78■■■■□ 3.32
DDX39A-215ENST00000590696 PLCH2O75038 1416 aa35.78■■■■□ 3.32
DDX39A-215ENST00000590696 CDK11AQ9UQ88 783 aaPredicted RBP35.77■■■■□ 3.32
DDX39A-215ENST00000590696 ZMYM4Q5VZL5 1548 aa35.72■■■■□ 3.31
DDX39A-215ENST00000590696 MADDQ8WXG6 1647 aa35.7■■■■□ 3.31
DDX39A-215ENST00000590696 SCAPERQ9BY12 1400 aa35.7■■■■□ 3.31
DDX39A-215ENST00000590696 ILDR1Q86SU0 546 aaPredicted RBP35.68■■■■□ 3.3
DDX39A-215ENST00000590696 YEATS2Q9ULM3 1422 aa35.67■■■■□ 3.3
DDX39A-215ENST00000590696 ZFYVE16Q7Z3T8 1539 aa35.67■■■■□ 3.3
DDX39A-215ENST00000590696 EFCAB2Q5VUJ9 269 aa35.66■■■■□ 3.3
DDX39A-215ENST00000590696 MYO5CQ9NQX4 1742 aa35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms