RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 JPH4Q96JJ6 628 aa31.08■■■□□ 2.57
LDLRAD4-215ENST00000590371 PRG4Q92954 1404 aaPredicted RBP31.06■■■□□ 2.56
LDLRAD4-215ENST00000590371 KIAA0586Q9BVV6 1533 aa31.04■■■□□ 2.56
LDLRAD4-215ENST00000590371 RAPGEF2Q9Y4G8 1499 aa30.99■■■□□ 2.55
LDLRAD4-215ENST00000590371 IQGAP2Q13576 1575 aa30.88■■■□□ 2.53
LDLRAD4-215ENST00000590371 TRHP20396 242 aaPredicted RBP30.86■■■□□ 2.53
LDLRAD4-215ENST00000590371 PRXQ9BXM0 1461 aa30.77■■■□□ 2.52
LDLRAD4-215ENST00000590371 CARMIL2Q6F5E8 1435 aa30.77■■■□□ 2.52
LDLRAD4-215ENST00000590371 CTTNBP2Q8WZ74 1663 aa30.75■■■□□ 2.51
LDLRAD4-215ENST00000590371 EEA1Q15075 1411 aa30.74■■■□□ 2.51
LDLRAD4-215ENST00000590371 CSRNP3Q8WYN3 585 aa30.74■■■□□ 2.51
LDLRAD4-215ENST00000590371 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
LDLRAD4-215ENST00000590371 TTBK1Q5TCY1 1321 aaPredicted RBP30.7■■■□□ 2.5
LDLRAD4-215ENST00000590371 FAM9AQ8IZU1 332 aaPredicted RBP30.67■■■□□ 2.5
LDLRAD4-215ENST00000590371 UGGT2Q9NYU1 1516 aa30.66■■■□□ 2.5
LDLRAD4-215ENST00000590371 TNIKQ9UKE5 1360 aa30.66■■■□□ 2.5
LDLRAD4-215ENST00000590371 PTPRGP23470 1445 aa30.65■■■□□ 2.5
LDLRAD4-215ENST00000590371 DISP1Q96F81 1524 aa30.63■■■□□ 2.49
LDLRAD4-215ENST00000590371 NPM1P06748 294 aaKnown RBP eCLIP30.62■■■□□ 2.49
LDLRAD4-215ENST00000590371 ADCY10Q96PN6 1610 aa30.61■■■□□ 2.49
LDLRAD4-215ENST00000590371 KIAA0556O60303 1618 aa30.58■■■□□ 2.49
LDLRAD4-215ENST00000590371 GOLGA3Q08378 1498 aa30.52■■■□□ 2.48
LDLRAD4-215ENST00000590371 KIF21BO75037 1637 aa30.44■■■□□ 2.46
LDLRAD4-215ENST00000590371 UACAQ9BZF9 1416 aa30.44■■■□□ 2.46
LDLRAD4-215ENST00000590371 MAPKBP1O60336 1514 aa30.43■■■□□ 2.46
LDLRAD4-215ENST00000590371 UHRF1BP1LA0JNW5 1464 aa30.39■■■□□ 2.46
LDLRAD4-215ENST00000590371 ABCC2Q92887 1545 aa30.39■■■□□ 2.46
LDLRAD4-215ENST00000590371 KIF13AQ9H1H9 1805 aa30.38■■■□□ 2.45
LDLRAD4-215ENST00000590371 EHMT2Q96KQ7 1210 aa30.34■■■□□ 2.45
LDLRAD4-215ENST00000590371 RANGAP1P46060 587 aaPredicted RBP30.33■■■□□ 2.45
LDLRAD4-215ENST00000590371 P3H3Q8IVL6 736 aa30.33■■■□□ 2.45
LDLRAD4-215ENST00000590371 ABCC10Q5T3U5 1492 aa30.32■■■□□ 2.44
LDLRAD4-215ENST00000590371 FAM69CQ0P6D2 419 aa30.31■■■□□ 2.44
LDLRAD4-215ENST00000590371 DIP2BQ9P265 1576 aa30.28■■■□□ 2.44
LDLRAD4-215ENST00000590371 PLB1Q6P1J6 1458 aa30.28■■■□□ 2.44
LDLRAD4-215ENST00000590371 SAMD9Q5K651 1589 aa30.28■■■□□ 2.44
LDLRAD4-215ENST00000590371 UBTFP17480 764 aaKnown RBP30.26■■■□□ 2.43
LDLRAD4-215ENST00000590371 KDM5BQ9UGL1 1544 aa30.25■■■□□ 2.43
LDLRAD4-215ENST00000590371 ZCCHC11Q5TAX3 1644 aaKnown RBP30.25■■■□□ 2.43
LDLRAD4-215ENST00000590371 ASXL2Q76L83 1435 aa30.23■■■□□ 2.43
LDLRAD4-215ENST00000590371 ABCA8O94911 1581 aa30.22■■■□□ 2.43
LDLRAD4-215ENST00000590371 EFCAB5A4FU69 1503 aa30.13■■■□□ 2.41
LDLRAD4-215ENST00000590371 FHOD3Q2V2M9 1422 aa30.13■■■□□ 2.41
LDLRAD4-215ENST00000590371 TSPOAP1O95153 1857 aa30.12■■■□□ 2.41
LDLRAD4-215ENST00000590371 RAPGEF6Q8TEU7 1601 aa30.07■■■□□ 2.4
LDLRAD4-215ENST00000590371 ARID3CA6NKF2 412 aa30.07■■■□□ 2.4
LDLRAD4-215ENST00000590371 GLI2P10070 1586 aa30.06■■■□□ 2.4
LDLRAD4-215ENST00000590371 WDR7Q9Y4E6 1490 aa30.06■■■□□ 2.4
LDLRAD4-215ENST00000590371 EPRSP07814 1512 aaKnown RBP30.05■■■□□ 2.4
LDLRAD4-215ENST00000590371 ATP10BO94823 1461 aa29.98■■■□□ 2.39
LDLRAD4-215ENST00000590371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.96■■■□□ 2.39
LDLRAD4-215ENST00000590371 HNRNPUL2Q1KMD3 747 aaKnown RBP29.96■■■□□ 2.39
LDLRAD4-215ENST00000590371 KCNH8Q96L42 1107 aa29.96■■■□□ 2.39
LDLRAD4-215ENST00000590371 MAP3K4Q9Y6R4 1608 aa29.93■■■□□ 2.38
LDLRAD4-215ENST00000590371 NUP153P49790 1475 aaKnown RBP29.92■■■□□ 2.38
LDLRAD4-215ENST00000590371 ARHGAP35Q9NRY4 1499 aa29.92■■■□□ 2.38
LDLRAD4-215ENST00000590371 KDM6BO15054 1643 aa29.9■■■□□ 2.38
LDLRAD4-215ENST00000590371 PPRC1Q5VV67 1664 aaKnown RBP29.9■■■□□ 2.38
LDLRAD4-215ENST00000590371 FMN1Q68DA7 1419 aa29.87■■■□□ 2.37
LDLRAD4-215ENST00000590371 TEX14Q8IWB6 1497 aa29.85■■■□□ 2.37
LDLRAD4-215ENST00000590371 CFAP43Q8NDM7 1665 aa29.85■■■□□ 2.37
LDLRAD4-215ENST00000590371 ATP1B4Q9UN42 357 aaPredicted RBP29.82■■■□□ 2.36
LDLRAD4-215ENST00000590371 CD109Q6YHK3 1445 aa29.8■■■□□ 2.36
LDLRAD4-215ENST00000590371 HECW1Q76N89 1606 aa29.78■■■□□ 2.36
LDLRAD4-215ENST00000590371 PLEKHD1A6NEE1 506 aa29.75■■■□□ 2.35
LDLRAD4-215ENST00000590371 CDK13Q14004 1512 aaKnown RBP29.72■■■□□ 2.35
LDLRAD4-215ENST00000590371 MAGI3Q5TCQ9 1506 aa29.72■■■□□ 2.35
LDLRAD4-215ENST00000590371 CLIP1P30622 1438 aa29.71■■■□□ 2.35
LDLRAD4-215ENST00000590371 ABCA9Q8IUA7 1624 aa29.71■■■□□ 2.35
LDLRAD4-215ENST00000590371 PCF11O94913 1555 aaKnown RBP29.61■■■□□ 2.33
LDLRAD4-215ENST00000590371 COL17A1Q9UMD9 1497 aaPredicted RBP29.61■■■□□ 2.33
LDLRAD4-215ENST00000590371 CDK11AQ9UQ88 783 aaPredicted RBP29.6■■■□□ 2.33
LDLRAD4-215ENST00000590371 CASKIN1Q8WXD9 1431 aa29.58■■■□□ 2.33
LDLRAD4-215ENST00000590371 LRRIQ1Q96JM4 1722 aa29.57■■■□□ 2.32
LDLRAD4-215ENST00000590371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.55■■■□□ 2.32
LDLRAD4-215ENST00000590371 CEP162Q5TB80 1403 aa29.53■■■□□ 2.32
LDLRAD4-215ENST00000590371 CCDC18Q5T9S5 1454 aa29.52■■■□□ 2.32
LDLRAD4-215ENST00000590371 FYCO1Q9BQS8 1478 aa29.52■■■□□ 2.32
LDLRAD4-215ENST00000590371 TTC37Q6PGP7 1564 aa29.52■■■□□ 2.32
LDLRAD4-215ENST00000590371 LOC105371045A0A1W2PR82 267 aa29.5■■■□□ 2.31
LDLRAD4-215ENST00000590371 PHLDB1Q86UU1 1377 aa29.5■■■□□ 2.31
LDLRAD4-215ENST00000590371 AEBP2Q6ZN18 517 aaPredicted RBP29.49■■■□□ 2.31
LDLRAD4-215ENST00000590371 NEO1Q92859 1461 aa29.48■■■□□ 2.31
LDLRAD4-215ENST00000590371 ARAP3Q8WWN8 1544 aa29.47■■■□□ 2.31
LDLRAD4-215ENST00000590371 TROQ12816 1431 aaPredicted RBP29.46■■■□□ 2.31
LDLRAD4-215ENST00000590371 KIF14Q15058 1648 aa29.46■■■□□ 2.31
LDLRAD4-215ENST00000590371 CFAP74Q9C0B2 1584 aa29.44■■■□□ 2.3
LDLRAD4-215ENST00000590371 FANCAO15360 1455 aa29.42■■■□□ 2.3
LDLRAD4-215ENST00000590371 MYO5CQ9NQX4 1742 aa29.39■■■□□ 2.3
LDLRAD4-215ENST00000590371 AKNAQ7Z591 1439 aa29.37■■■□□ 2.29
LDLRAD4-215ENST00000590371 PLCH2O75038 1416 aa29.36■■■□□ 2.29
LDLRAD4-215ENST00000590371 RAPGEF3O95398 923 aa29.34■■■□□ 2.29
LDLRAD4-215ENST00000590371 DENND4BO75064 1496 aaPredicted RBP29.3■■■□□ 2.28
LDLRAD4-215ENST00000590371 FRMPD1Q5SYB0 1578 aa29.27■■■□□ 2.28
LDLRAD4-215ENST00000590371 ARHGAP5Q13017 1502 aa29.27■■■□□ 2.28
LDLRAD4-215ENST00000590371 EFCAB2Q5VUJ9 269 aa29.27■■■□□ 2.28
LDLRAD4-215ENST00000590371 ADGRL1O94910 1474 aa29.26■■■□□ 2.27
LDLRAD4-215ENST00000590371 RICTORQ6R327 1708 aa29.25■■■□□ 2.27
LDLRAD4-215ENST00000590371 KDM4FA0A1W2PPD8 638 aa29.24■■■□□ 2.27
LDLRAD4-215ENST00000590371 MTUS2Q5JR59 1369 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms