RNA–Protein interactions for RNA: ENST00000590288.1

RHBDF2-208, Transcript of rhomboid 5 homolog 2, human

TSL 4

Gene RHBDF2, Length 734 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHBDF2-208	ENST00000590288	CUL7	Q14999	1698 aa		33.9	■■■■□ 3.02
RHBDF2-208	ENST00000590288	JPH4	Q96JJ6	628 aa		33.88	■■■■□ 3.01
RHBDF2-208	ENST00000590288	KIAA0586	Q9BVV6	1533 aa		33.75	■■■□□ 2.99
RHBDF2-208	ENST00000590288	CARMIL1	Q5VZK9	1371 aa		33.72	■■■□□ 2.99
RHBDF2-208	ENST00000590288	ADCY10	Q96PN6	1610 aa		33.56	■■■□□ 2.96
RHBDF2-208	ENST00000590288	KIF13A	Q9H1H9	1805 aa		33.54	■■■□□ 2.96
RHBDF2-208	ENST00000590288	IQGAP2	Q13576	1575 aa		33.51	■■■□□ 2.95
RHBDF2-208	ENST00000590288	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.47	■■■□□ 2.95
RHBDF2-208	ENST00000590288	RAPGEF2	Q9Y4G8	1499 aa		33.45	■■■□□ 2.95
RHBDF2-208	ENST00000590288	MAPKBP1	O60336	1514 aa		33.41	■■■□□ 2.94
RHBDF2-208	ENST00000590288	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.4	■■■□□ 2.94
RHBDF2-208	ENST00000590288	PTPRG	P23470	1445 aa		33.39	■■■□□ 2.94
RHBDF2-208	ENST00000590288	NPM1	P06748	294 aa	Known RBP eCLIP	33.38	■■■□□ 2.93
RHBDF2-208	ENST00000590288	CARMIL2	Q6F5E8	1435 aa		33.37	■■■□□ 2.93
RHBDF2-208	ENST00000590288	DISP1	Q96F81	1524 aa		33.35	■■■□□ 2.93
RHBDF2-208	ENST00000590288	ABCC10	Q5T3U5	1492 aa		33.35	■■■□□ 2.93
RHBDF2-208	ENST00000590288	TNIK	Q9UKE5	1360 aa		33.34	■■■□□ 2.93
RHBDF2-208	ENST00000590288	DIP2B	Q9P265	1576 aa		33.33	■■■□□ 2.93
RHBDF2-208	ENST00000590288	FAM69C	Q0P6D2	419 aa		33.3	■■■□□ 2.92
RHBDF2-208	ENST00000590288	UGGT2	Q9NYU1	1516 aa		33.28	■■■□□ 2.92
RHBDF2-208	ENST00000590288	CTTNBP2	Q8WZ74	1663 aa		33.25	■■■□□ 2.91
RHBDF2-208	ENST00000590288	KIAA0556	O60303	1618 aa		33.23	■■■□□ 2.91
RHBDF2-208	ENST00000590288	ABCC2	Q92887	1545 aa		33.21	■■■□□ 2.91
RHBDF2-208	ENST00000590288	PRX	Q9BXM0	1461 aa		33.19	■■■□□ 2.9
RHBDF2-208	ENST00000590288	UHRF1BP1L	A0JNW5	1464 aa		33.15	■■■□□ 2.9
RHBDF2-208	ENST00000590288	UACA	Q9BZF9	1416 aa		33.15	■■■□□ 2.9
RHBDF2-208	ENST00000590288	TSPOAP1	O95153	1857 aa		33.12	■■■□□ 2.89
RHBDF2-208	ENST00000590288	ASXL2	Q76L83	1435 aa		33.08	■■■□□ 2.89
RHBDF2-208	ENST00000590288	KDM5B	Q9UGL1	1544 aa		33.02	■■■□□ 2.88
RHBDF2-208	ENST00000590288	PLB1	Q6P1J6	1458 aa		33.01	■■■□□ 2.88
RHBDF2-208	ENST00000590288	ZCCHC11	Q5TAX3	1644 aa	Known RBP	33.01	■■■□□ 2.87
RHBDF2-208	ENST00000590288	GOLGA3	Q08378	1498 aa		32.98	■■■□□ 2.87
RHBDF2-208	ENST00000590288	KDM6B	O15054	1643 aa		32.95	■■■□□ 2.87
RHBDF2-208	ENST00000590288	CSRNP3	Q8WYN3	585 aa		32.95	■■■□□ 2.87
RHBDF2-208	ENST00000590288	GLI2	P10070	1586 aa		32.95	■■■□□ 2.86
RHBDF2-208	ENST00000590288	PPRC1	Q5VV67	1664 aa	Known RBP	32.93	■■■□□ 2.86
RHBDF2-208	ENST00000590288	ABCA8	O94911	1581 aa		32.89	■■■□□ 2.86
RHBDF2-208	ENST00000590288	EPRS	P07814	1512 aa	Known RBP	32.89	■■■□□ 2.86
RHBDF2-208	ENST00000590288	MAP3K4	Q9Y6R4	1608 aa		32.83	■■■□□ 2.85
RHBDF2-208	ENST00000590288	EEA1	Q15075	1411 aa		32.81	■■■□□ 2.84
RHBDF2-208	ENST00000590288	P3H3	Q8IVL6	736 aa		32.8	■■■□□ 2.84
RHBDF2-208	ENST00000590288	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.79	■■■□□ 2.84
RHBDF2-208	ENST00000590288	WDR7	Q9Y4E6	1490 aa		32.79	■■■□□ 2.84
RHBDF2-208	ENST00000590288	SAMD9	Q5K651	1589 aa		32.77	■■■□□ 2.84
RHBDF2-208	ENST00000590288	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.67	■■■□□ 2.82
RHBDF2-208	ENST00000590288	ARID3C	A6NKF2	412 aa		32.66	■■■□□ 2.82
RHBDF2-208	ENST00000590288	RANGAP1	P46060	587 aa	Predicted RBP	32.64	■■■□□ 2.82
RHBDF2-208	ENST00000590288	KIF21B	O75037	1637 aa		32.63	■■■□□ 2.81
RHBDF2-208	ENST00000590288	TEX14	Q8IWB6	1497 aa		32.62	■■■□□ 2.81
RHBDF2-208	ENST00000590288	KCNH8	Q96L42	1107 aa		32.62	■■■□□ 2.81
RHBDF2-208	ENST00000590288	ATP10B	O94823	1461 aa		32.61	■■■□□ 2.81
RHBDF2-208	ENST00000590288	CFAP43	Q8NDM7	1665 aa		32.59	■■■□□ 2.81
RHBDF2-208	ENST00000590288	CHIC1	Q5VXU3	224 aa		32.59	■■■□□ 2.81
RHBDF2-208	ENST00000590288	RAPGEF6	Q8TEU7	1601 aa		32.59	■■■□□ 2.81
RHBDF2-208	ENST00000590288	FHOD3	Q2V2M9	1422 aa		32.56	■■■□□ 2.8
RHBDF2-208	ENST00000590288	CD109	Q6YHK3	1445 aa		32.54	■■■□□ 2.8
RHBDF2-208	ENST00000590288	KDM4F	A0A1W2PPD8	638 aa		32.52	■■■□□ 2.8
RHBDF2-208	ENST00000590288	MAGI3	Q5TCQ9	1506 aa		32.51	■■■□□ 2.8
RHBDF2-208	ENST00000590288	EHMT2	Q96KQ7	1210 aa		32.48	■■■□□ 2.79
RHBDF2-208	ENST00000590288	NUP153	P49790	1475 aa	Known RBP	32.48	■■■□□ 2.79
RHBDF2-208	ENST00000590288	EFCAB5	A4FU69	1503 aa		32.42	■■■□□ 2.78
RHBDF2-208	ENST00000590288	ABCA9	Q8IUA7	1624 aa		32.4	■■■□□ 2.78
RHBDF2-208	ENST00000590288	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.38	■■■□□ 2.77
RHBDF2-208	ENST00000590288	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.38	■■■□□ 2.77
RHBDF2-208	ENST00000590288	UBTF	P17480	764 aa	Known RBP	32.33	■■■□□ 2.77
RHBDF2-208	ENST00000590288	ADGRL1	O94910	1474 aa		32.33	■■■□□ 2.77
RHBDF2-208	ENST00000590288	ARAP3	Q8WWN8	1544 aa		32.26	■■■□□ 2.75
RHBDF2-208	ENST00000590288	ARHGAP35	Q9NRY4	1499 aa		32.23	■■■□□ 2.75
RHBDF2-208	ENST00000590288	CDK13	Q14004	1512 aa	Known RBP	32.21	■■■□□ 2.75
RHBDF2-208	ENST00000590288	PLEKHD1	A6NEE1	506 aa		32.18	■■■□□ 2.74
RHBDF2-208	ENST00000590288	NEO1	Q92859	1461 aa		32.15	■■■□□ 2.74
RHBDF2-208	ENST00000590288	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.14	■■■□□ 2.74
RHBDF2-208	ENST00000590288	TTC37	Q6PGP7	1564 aa		32.12	■■■□□ 2.73
RHBDF2-208	ENST00000590288	PHLDB1	Q86UU1	1377 aa		32.12	■■■□□ 2.73
RHBDF2-208	ENST00000590288	FMN1	Q68DA7	1419 aa		32.1	■■■□□ 2.73
RHBDF2-208	ENST00000590288	RAPGEF3	O95398	923 aa		32.1	■■■□□ 2.73
RHBDF2-208	ENST00000590288	HECW1	Q76N89	1606 aa		32.1	■■■□□ 2.73
RHBDF2-208	ENST00000590288	FRMPD1	Q5SYB0	1578 aa		32.1	■■■□□ 2.73
RHBDF2-208	ENST00000590288	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.07	■■■□□ 2.72
RHBDF2-208	ENST00000590288	LRRIQ1	Q96JM4	1722 aa		32.02	■■■□□ 2.72
RHBDF2-208	ENST00000590288	FANCA	O15360	1455 aa		32.01	■■■□□ 2.71
RHBDF2-208	ENST00000590288	RICTOR	Q6R327	1708 aa		31.98	■■■□□ 2.71
RHBDF2-208	ENST00000590288	AKNA	Q7Z591	1439 aa		31.98	■■■□□ 2.71
RHBDF2-208	ENST00000590288	CFAP74	Q9C0B2	1584 aa		31.98	■■■□□ 2.71
RHBDF2-208	ENST00000590288	DENND4B	O75064	1496 aa	Predicted RBP	31.94	■■■□□ 2.7
RHBDF2-208	ENST00000590288	KIF14	Q15058	1648 aa		31.93	■■■□□ 2.7
RHBDF2-208	ENST00000590288	PCF11	O94913	1555 aa	Known RBP	31.91	■■■□□ 2.7
RHBDF2-208	ENST00000590288	ILDR1	Q86SU0	546 aa	Predicted RBP	31.88	■■■□□ 2.69
RHBDF2-208	ENST00000590288	PLCH2	O75038	1416 aa		31.88	■■■□□ 2.69
RHBDF2-208	ENST00000590288	MYO5C	Q9NQX4	1742 aa		31.87	■■■□□ 2.69
RHBDF2-208	ENST00000590288	ARHGEF40	Q8TER5	1519 aa		31.87	■■■□□ 2.69
RHBDF2-208	ENST00000590288	ADAMTSL3	P82987	1691 aa		31.85	■■■□□ 2.69
RHBDF2-208	ENST00000590288	TRO	Q12816	1431 aa	Predicted RBP	31.84	■■■□□ 2.69
RHBDF2-208	ENST00000590288	HECW2	Q9P2P5	1572 aa		31.83	■■■□□ 2.69
RHBDF2-208	ENST00000590288	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.83	■■■□□ 2.69
RHBDF2-208	ENST00000590288	ZMYM4	Q5VZL5	1548 aa		31.82	■■■□□ 2.68
RHBDF2-208	ENST00000590288	CASKIN1	Q8WXD9	1431 aa		31.82	■■■□□ 2.68
RHBDF2-208	ENST00000590288	BCORL1	Q5H9F3	1711 aa		31.8	■■■□□ 2.68
RHBDF2-208	ENST00000590288	SCAPER	Q9BY12	1400 aa		31.79	■■■□□ 2.68
RHBDF2-208	ENST00000590288	CLIP1	P30622	1438 aa		31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms