RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 KIAA0586Q9BVV6 1533 aa31.06■■■□□ 2.56
DDX39A-212ENST00000590260 JPH4Q96JJ6 628 aa31.04■■■□□ 2.56
DDX39A-212ENST00000590260 PRG4Q92954 1404 aaPredicted RBP31.03■■■□□ 2.56
DDX39A-212ENST00000590260 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
DDX39A-212ENST00000590260 PRXQ9BXM0 1461 aa30.91■■■□□ 2.54
DDX39A-212ENST00000590260 IQGAP2Q13576 1575 aa30.87■■■□□ 2.53
DDX39A-212ENST00000590260 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
DDX39A-212ENST00000590260 CTTNBP2Q8WZ74 1663 aa30.76■■■□□ 2.51
DDX39A-212ENST00000590260 DISP1Q96F81 1524 aa30.74■■■□□ 2.51
DDX39A-212ENST00000590260 CSRNP3Q8WYN3 585 aa30.74■■■□□ 2.51
DDX39A-212ENST00000590260 UGGT2Q9NYU1 1516 aa30.73■■■□□ 2.51
DDX39A-212ENST00000590260 EEA1Q15075 1411 aa30.71■■■□□ 2.51
DDX39A-212ENST00000590260 ADCY10Q96PN6 1610 aa30.67■■■□□ 2.5
DDX39A-212ENST00000590260 CARMIL2Q6F5E8 1435 aa30.63■■■□□ 2.49
DDX39A-212ENST00000590260 KIAA0556O60303 1618 aa30.62■■■□□ 2.49
DDX39A-212ENST00000590260 FAM9AQ8IZU1 332 aaPredicted RBP30.62■■■□□ 2.49
DDX39A-212ENST00000590260 TNIKQ9UKE5 1360 aa30.61■■■□□ 2.49
DDX39A-212ENST00000590260 TRHP20396 242 aaPredicted RBP30.6■■■□□ 2.49
DDX39A-212ENST00000590260 PTPRGP23470 1445 aa30.59■■■□□ 2.49
DDX39A-212ENST00000590260 KIF21BO75037 1637 aa30.52■■■□□ 2.48
DDX39A-212ENST00000590260 TTBK1Q5TCY1 1321 aaPredicted RBP30.51■■■□□ 2.48
DDX39A-212ENST00000590260 MAPKBP1O60336 1514 aa30.44■■■□□ 2.46
DDX39A-212ENST00000590260 UHRF1BP1LA0JNW5 1464 aa30.43■■■□□ 2.46
DDX39A-212ENST00000590260 KIF13AQ9H1H9 1805 aa30.43■■■□□ 2.46
DDX39A-212ENST00000590260 GOLGA3Q08378 1498 aa30.42■■■□□ 2.46
DDX39A-212ENST00000590260 UACAQ9BZF9 1416 aa30.41■■■□□ 2.46
DDX39A-212ENST00000590260 ABCC2Q92887 1545 aa30.4■■■□□ 2.46
DDX39A-212ENST00000590260 SAMD9Q5K651 1589 aa30.4■■■□□ 2.46
DDX39A-212ENST00000590260 PLB1Q6P1J6 1458 aa30.34■■■□□ 2.45
DDX39A-212ENST00000590260 NPM1P06748 294 aaKnown RBP eCLIP30.33■■■□□ 2.45
DDX39A-212ENST00000590260 ABCC10Q5T3U5 1492 aa30.32■■■□□ 2.44
DDX39A-212ENST00000590260 ABCA8O94911 1581 aa30.32■■■□□ 2.44
DDX39A-212ENST00000590260 DIP2BQ9P265 1576 aa30.32■■■□□ 2.44
DDX39A-212ENST00000590260 KDM5BQ9UGL1 1544 aa30.31■■■□□ 2.44
DDX39A-212ENST00000590260 P3H3Q8IVL6 736 aa30.28■■■□□ 2.44
DDX39A-212ENST00000590260 ZCCHC11Q5TAX3 1644 aaKnown RBP30.26■■■□□ 2.44
DDX39A-212ENST00000590260 EHMT2Q96KQ7 1210 aa30.25■■■□□ 2.43
DDX39A-212ENST00000590260 ASXL2Q76L83 1435 aa30.22■■■□□ 2.43
DDX39A-212ENST00000590260 FAM69CQ0P6D2 419 aa30.19■■■□□ 2.42
DDX39A-212ENST00000590260 RANGAP1P46060 587 aaPredicted RBP30.18■■■□□ 2.42
DDX39A-212ENST00000590260 FHOD3Q2V2M9 1422 aa30.16■■■□□ 2.42
DDX39A-212ENST00000590260 EFCAB5A4FU69 1503 aa30.12■■■□□ 2.41
DDX39A-212ENST00000590260 UBTFP17480 764 aaKnown RBP30.11■■■□□ 2.41
DDX39A-212ENST00000590260 GLI2P10070 1586 aa30.09■■■□□ 2.41
DDX39A-212ENST00000590260 RAPGEF6Q8TEU7 1601 aa30.08■■■□□ 2.41
DDX39A-212ENST00000590260 EPRSP07814 1512 aaKnown RBP30.06■■■□□ 2.4
DDX39A-212ENST00000590260 ATP10BO94823 1461 aa30.05■■■□□ 2.4
DDX39A-212ENST00000590260 ARHGAP35Q9NRY4 1499 aa30.04■■■□□ 2.4
DDX39A-212ENST00000590260 WDR7Q9Y4E6 1490 aa30.03■■■□□ 2.4
DDX39A-212ENST00000590260 PPRC1Q5VV67 1664 aaKnown RBP30.03■■■□□ 2.4
DDX39A-212ENST00000590260 TSPOAP1O95153 1857 aa30.02■■■□□ 2.4
DDX39A-212ENST00000590260 NUP153P49790 1475 aaKnown RBP30.01■■■□□ 2.4
DDX39A-212ENST00000590260 MAP3K4Q9Y6R4 1608 aa29.98■■■□□ 2.39
DDX39A-212ENST00000590260 ARID3CA6NKF2 412 aa29.98■■■□□ 2.39
DDX39A-212ENST00000590260 KCNH8Q96L42 1107 aa29.82■■■□□ 2.36
DDX39A-212ENST00000590260 CFAP43Q8NDM7 1665 aa29.82■■■□□ 2.36
DDX39A-212ENST00000590260 KDM6BO15054 1643 aa29.81■■■□□ 2.36
DDX39A-212ENST00000590260 FMN1Q68DA7 1419 aa29.79■■■□□ 2.36
DDX39A-212ENST00000590260 CDK13Q14004 1512 aaKnown RBP29.79■■■□□ 2.36
DDX39A-212ENST00000590260 LRRIQ1Q96JM4 1722 aa29.76■■■□□ 2.35
DDX39A-212ENST00000590260 COL17A1Q9UMD9 1497 aaPredicted RBP29.75■■■□□ 2.35
DDX39A-212ENST00000590260 ABCA9Q8IUA7 1624 aa29.74■■■□□ 2.35
DDX39A-212ENST00000590260 CD109Q6YHK3 1445 aa29.74■■■□□ 2.35
DDX39A-212ENST00000590260 HECW1Q76N89 1606 aa29.74■■■□□ 2.35
DDX39A-212ENST00000590260 MAGI3Q5TCQ9 1506 aa29.73■■■□□ 2.35
DDX39A-212ENST00000590260 CLIP1P30622 1438 aa29.71■■■□□ 2.35
DDX39A-212ENST00000590260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.71■■■□□ 2.35
DDX39A-212ENST00000590260 HNRNPUL2Q1KMD3 747 aaKnown RBP29.71■■■□□ 2.35
DDX39A-212ENST00000590260 TEX14Q8IWB6 1497 aa29.69■■■□□ 2.34
DDX39A-212ENST00000590260 PCF11O94913 1555 aaKnown RBP29.69■■■□□ 2.34
DDX39A-212ENST00000590260 CASKIN1Q8WXD9 1431 aa29.62■■■□□ 2.33
DDX39A-212ENST00000590260 LOC105371045A0A1W2PR82 267 aa29.61■■■□□ 2.33
DDX39A-212ENST00000590260 PLEKHD1A6NEE1 506 aa29.61■■■□□ 2.33
DDX39A-212ENST00000590260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.61■■■□□ 2.334e-7■■□□□ 11.9
DDX39A-212ENST00000590260 ATP1B4Q9UN42 357 aaPredicted RBP29.59■■■□□ 2.33
DDX39A-212ENST00000590260 TTC37Q6PGP7 1564 aa29.59■■■□□ 2.33
DDX39A-212ENST00000590260 CEP162Q5TB80 1403 aa29.57■■■□□ 2.32
DDX39A-212ENST00000590260 FYCO1Q9BQS8 1478 aa29.53■■■□□ 2.32
DDX39A-212ENST00000590260 KIF14Q15058 1648 aa29.51■■■□□ 2.31
DDX39A-212ENST00000590260 ARAP3Q8WWN8 1544 aa29.49■■■□□ 2.31
DDX39A-212ENST00000590260 CCDC18Q5T9S5 1454 aa29.47■■■□□ 2.31
DDX39A-212ENST00000590260 TROQ12816 1431 aaPredicted RBP29.46■■■□□ 2.31
DDX39A-212ENST00000590260 NEO1Q92859 1461 aa29.45■■■□□ 2.31
DDX39A-212ENST00000590260 FRMPD1Q5SYB0 1578 aa29.4■■■□□ 2.3
DDX39A-212ENST00000590260 CDK11AQ9UQ88 783 aaPredicted RBP29.39■■■□□ 2.3
DDX39A-212ENST00000590260 PHLDB1Q86UU1 1377 aa29.38■■■□□ 2.29
DDX39A-212ENST00000590260 PLCH2O75038 1416 aa29.37■■■□□ 2.29
DDX39A-212ENST00000590260 FANCAO15360 1455 aa29.36■■■□□ 2.29
DDX39A-212ENST00000590260 MYO5CQ9NQX4 1742 aa29.35■■■□□ 2.29
DDX39A-212ENST00000590260 AKNAQ7Z591 1439 aa29.34■■■□□ 2.29
DDX39A-212ENST00000590260 CFAP74Q9C0B2 1584 aa29.33■■■□□ 2.29
DDX39A-212ENST00000590260 RAPGEF3O95398 923 aa29.31■■■□□ 2.28
DDX39A-212ENST00000590260 RICTORQ6R327 1708 aa29.3■■■□□ 2.28
DDX39A-212ENST00000590260 CDC42BPBQ9Y5S2 1711 aa29.28■■■□□ 2.28
DDX39A-212ENST00000590260 KDM4FA0A1W2PPD8 638 aa29.26■■■□□ 2.27
DDX39A-212ENST00000590260 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
DDX39A-212ENST00000590260 DENND4BO75064 1496 aaPredicted RBP29.23■■■□□ 2.27
DDX39A-212ENST00000590260 CDC42BPAQ5VT25 1732 aa29.23■■■□□ 2.27
DDX39A-212ENST00000590260 VPS8Q8N3P4 1428 aa29.21■■■□□ 2.27
DDX39A-212ENST00000590260 ADGRL1O94910 1474 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms