RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 RUSC2Q8N2Y8 1516 aa31.23■■■□□ 2.59
PRKCSH-211ENST00000590098 CUL7Q14999 1698 aa31.19■■■□□ 2.58
PRKCSH-211ENST00000590098 KIAA0586Q9BVV6 1533 aa31.09■■■□□ 2.57
PRKCSH-211ENST00000590098 CARMIL1Q5VZK9 1371 aa31.04■■■□□ 2.56
PRKCSH-211ENST00000590098 NPM1P06748 294 aaKnown RBP eCLIP30.99■■■□□ 2.55
PRKCSH-211ENST00000590098 KIF13AQ9H1H9 1805 aa30.94■■■□□ 2.54
PRKCSH-211ENST00000590098 ADCY10Q96PN6 1610 aa30.89■■■□□ 2.54
PRKCSH-211ENST00000590098 FAM69CQ0P6D2 419 aa30.88■■■□□ 2.53
PRKCSH-211ENST00000590098 MAPKBP1O60336 1514 aa30.84■■■□□ 2.53
PRKCSH-211ENST00000590098 ABCC10Q5T3U5 1492 aa30.82■■■□□ 2.53
PRKCSH-211ENST00000590098 CARMIL2Q6F5E8 1435 aa30.82■■■□□ 2.52
PRKCSH-211ENST00000590098 TTBK1Q5TCY1 1321 aaPredicted RBP30.82■■■□□ 2.52
PRKCSH-211ENST00000590098 IQGAP2Q13576 1575 aa30.82■■■□□ 2.52
PRKCSH-211ENST00000590098 PTPRGP23470 1445 aa30.81■■■□□ 2.52
PRKCSH-211ENST00000590098 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
PRKCSH-211ENST00000590098 TNIKQ9UKE5 1360 aa30.76■■■□□ 2.51
PRKCSH-211ENST00000590098 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.51
PRKCSH-211ENST00000590098 DIP2BQ9P265 1576 aa30.72■■■□□ 2.51
PRKCSH-211ENST00000590098 DISP1Q96F81 1524 aa30.63■■■□□ 2.49
PRKCSH-211ENST00000590098 ABCC2Q92887 1545 aa30.62■■■□□ 2.49
PRKCSH-211ENST00000590098 UGGT2Q9NYU1 1516 aa30.61■■■□□ 2.49
PRKCSH-211ENST00000590098 UHRF1BP1LA0JNW5 1464 aa30.57■■■□□ 2.48
PRKCSH-211ENST00000590098 UACAQ9BZF9 1416 aa30.57■■■□□ 2.48
PRKCSH-211ENST00000590098 TSPOAP1O95153 1857 aa30.57■■■□□ 2.48
PRKCSH-211ENST00000590098 CTTNBP2Q8WZ74 1663 aa30.52■■■□□ 2.48
PRKCSH-211ENST00000590098 KIAA0556O60303 1618 aa30.52■■■□□ 2.48
PRKCSH-211ENST00000590098 ASXL2Q76L83 1435 aa30.51■■■□□ 2.47
PRKCSH-211ENST00000590098 PLB1Q6P1J6 1458 aa30.5■■■□□ 2.47
PRKCSH-211ENST00000590098 KDM6BO15054 1643 aa30.47■■■□□ 2.47
PRKCSH-211ENST00000590098 PRXQ9BXM0 1461 aa30.43■■■□□ 2.46
PRKCSH-211ENST00000590098 KDM5BQ9UGL1 1544 aa30.42■■■□□ 2.46
PRKCSH-211ENST00000590098 GLI2P10070 1586 aa30.41■■■□□ 2.46
PRKCSH-211ENST00000590098 GOLGA3Q08378 1498 aa30.41■■■□□ 2.46
PRKCSH-211ENST00000590098 ZCCHC11Q5TAX3 1644 aaKnown RBP30.38■■■□□ 2.45
PRKCSH-211ENST00000590098 KDM4FA0A1W2PPD8 638 aa30.32■■■□□ 2.44
PRKCSH-211ENST00000590098 EPRSP07814 1512 aaKnown RBP30.32■■■□□ 2.44
PRKCSH-211ENST00000590098 PPRC1Q5VV67 1664 aaKnown RBP30.31■■■□□ 2.44
PRKCSH-211ENST00000590098 CSRNP3Q8WYN3 585 aa30.27■■■□□ 2.44
PRKCSH-211ENST00000590098 FAM9AQ8IZU1 332 aaPredicted RBP30.25■■■□□ 2.43
PRKCSH-211ENST00000590098 MAP3K4Q9Y6R4 1608 aa30.25■■■□□ 2.43
PRKCSH-211ENST00000590098 COL17A1Q9UMD9 1497 aaPredicted RBP30.24■■■□□ 2.43
PRKCSH-211ENST00000590098 WDR7Q9Y4E6 1490 aa30.23■■■□□ 2.43
PRKCSH-211ENST00000590098 ABCA8O94911 1581 aa30.23■■■□□ 2.43
PRKCSH-211ENST00000590098 TEX14Q8IWB6 1497 aa30.19■■■□□ 2.42
PRKCSH-211ENST00000590098 P3H3Q8IVL6 736 aa30.18■■■□□ 2.42
PRKCSH-211ENST00000590098 KCNH8Q96L42 1107 aa30.15■■■□□ 2.42
PRKCSH-211ENST00000590098 EEA1Q15075 1411 aa30.14■■■□□ 2.42
PRKCSH-211ENST00000590098 ARID3CA6NKF2 412 aa30.09■■■□□ 2.41
PRKCSH-211ENST00000590098 CFAP43Q8NDM7 1665 aa30.06■■■□□ 2.4
PRKCSH-211ENST00000590098 SAMD9Q5K651 1589 aa30.06■■■□□ 2.4
PRKCSH-211ENST00000590098 CD109Q6YHK3 1445 aa30.05■■■□□ 2.4
PRKCSH-211ENST00000590098 MAGI3Q5TCQ9 1506 aa30.01■■■□□ 2.39
PRKCSH-211ENST00000590098 ATP10BO94823 1461 aa29.99■■■□□ 2.39
PRKCSH-211ENST00000590098 RANGAP1P46060 587 aaPredicted RBP29.98■■■□□ 2.39
PRKCSH-211ENST00000590098 RAPGEF6Q8TEU7 1601 aa29.95■■■□□ 2.38
PRKCSH-211ENST00000590098 ADGRL1O94910 1474 aa29.93■■■□□ 2.38
PRKCSH-211ENST00000590098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.9■■■□□ 2.38
PRKCSH-211ENST00000590098 HNRNPUL2Q1KMD3 747 aaKnown RBP29.9■■■□□ 2.38
PRKCSH-211ENST00000590098 KIF21BO75037 1637 aa29.89■■■□□ 2.37
PRKCSH-211ENST00000590098 FHOD3Q2V2M9 1422 aa29.87■■■□□ 2.37
PRKCSH-211ENST00000590098 ABCA9Q8IUA7 1624 aa29.82■■■□□ 2.36
PRKCSH-211ENST00000590098 NUP153P49790 1475 aaKnown RBP29.81■■■□□ 2.36
PRKCSH-211ENST00000590098 EFCAB5A4FU69 1503 aa29.8■■■□□ 2.36
PRKCSH-211ENST00000590098 ARAP3Q8WWN8 1544 aa29.77■■■□□ 2.36
PRKCSH-211ENST00000590098 PHLDB1Q86UU1 1377 aa29.76■■■□□ 2.35
PRKCSH-211ENST00000590098 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
PRKCSH-211ENST00000590098 UBTFP17480 764 aaKnown RBP29.73■■■□□ 2.35
PRKCSH-211ENST00000590098 PLEKHD1A6NEE1 506 aa29.72■■■□□ 2.35
PRKCSH-211ENST00000590098 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
PRKCSH-211ENST00000590098 RAPGEF3O95398 923 aa29.69■■■□□ 2.34
PRKCSH-211ENST00000590098 NEO1Q92859 1461 aa29.68■■■□□ 2.34
PRKCSH-211ENST00000590098 FMN1Q68DA7 1419 aa29.55■■■□□ 2.32
PRKCSH-211ENST00000590098 ATP1B4Q9UN42 357 aaPredicted RBP29.55■■■□□ 2.32
PRKCSH-211ENST00000590098 CDK13Q14004 1512 aaKnown RBP29.54■■■□□ 2.32
PRKCSH-211ENST00000590098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.54■■■□□ 2.32
PRKCSH-211ENST00000590098 CFAP74Q9C0B2 1584 aa29.52■■■□□ 2.32
PRKCSH-211ENST00000590098 ARHGAP35Q9NRY4 1499 aa29.51■■■□□ 2.31
PRKCSH-211ENST00000590098 HECW2Q9P2P5 1572 aa29.51■■■□□ 2.31
PRKCSH-211ENST00000590098 FRMPD1Q5SYB0 1578 aa29.5■■■□□ 2.31
PRKCSH-211ENST00000590098 FANCAO15360 1455 aa29.49■■■□□ 2.31
PRKCSH-211ENST00000590098 TTC37Q6PGP7 1564 aa29.49■■■□□ 2.31
PRKCSH-211ENST00000590098 AKNAQ7Z591 1439 aa29.49■■■□□ 2.31
PRKCSH-211ENST00000590098 HECW1Q76N89 1606 aa29.49■■■□□ 2.31
PRKCSH-211ENST00000590098 DENND4BO75064 1496 aaPredicted RBP29.48■■■□□ 2.31
PRKCSH-211ENST00000590098 CDK11AQ9UQ88 783 aaPredicted RBP29.44■■■□□ 2.3
PRKCSH-211ENST00000590098 RICTORQ6R327 1708 aa29.43■■■□□ 2.3
PRKCSH-211ENST00000590098 ARID4BQ4LE39 1312 aaPredicted RBP29.42■■■□□ 2.3
PRKCSH-211ENST00000590098 ILDR1Q86SU0 546 aaPredicted RBP29.39■■■□□ 2.3
PRKCSH-211ENST00000590098 ADAMTSL3P82987 1691 aa29.38■■■□□ 2.29
PRKCSH-211ENST00000590098 PLCH2O75038 1416 aa29.37■■■□□ 2.29
PRKCSH-211ENST00000590098 ARHGEF40Q8TER5 1519 aa29.36■■■□□ 2.29
PRKCSH-211ENST00000590098 PTPRMP28827 1452 aa29.36■■■□□ 2.29
PRKCSH-211ENST00000590098 BCORL1Q5H9F3 1711 aa29.35■■■□□ 2.29
PRKCSH-211ENST00000590098 MYO5CQ9NQX4 1742 aa29.32■■■□□ 2.28
PRKCSH-211ENST00000590098 ZMYM4Q5VZL5 1548 aa29.3■■■□□ 2.28
PRKCSH-211ENST00000590098 KIF14Q15058 1648 aa29.3■■■□□ 2.28
PRKCSH-211ENST00000590098 SCAPERQ9BY12 1400 aa29.29■■■□□ 2.28
PRKCSH-211ENST00000590098 EFCAB2Q5VUJ9 269 aa29.29■■■□□ 2.28
PRKCSH-211ENST00000590098 CLIP1P30622 1438 aa29.28■■■□□ 2.28
PRKCSH-211ENST00000590098 TROQ12816 1431 aaPredicted RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms