RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RUSC2Q8N2Y8 1516 aa31.49■■■□□ 2.63
H3F3B-209ENST00000589949 CUL7Q14999 1698 aa31.36■■■□□ 2.61
H3F3B-209ENST00000589949 KIAA0586Q9BVV6 1533 aa31.34■■■□□ 2.61
H3F3B-209ENST00000589949 CARMIL1Q5VZK9 1371 aa31.3■■■□□ 2.6
H3F3B-209ENST00000589949 ADCY10Q96PN6 1610 aa31.15■■■□□ 2.58
H3F3B-209ENST00000589949 KIF13AQ9H1H9 1805 aa31.13■■■□□ 2.57
H3F3B-209ENST00000589949 IQGAP2Q13576 1575 aa31.04■■■□□ 2.56
H3F3B-209ENST00000589949 MAPKBP1O60336 1514 aa31.03■■■□□ 2.56
H3F3B-209ENST00000589949 PTPRGP23470 1445 aa31.03■■■□□ 2.56
H3F3B-209ENST00000589949 NPM1P06748 294 aaKnown RBP eCLIP31.02■■■□□ 2.56
H3F3B-209ENST00000589949 ABCC10Q5T3U5 1492 aa31.01■■■□□ 2.56
H3F3B-209ENST00000589949 RAPGEF2Q9Y4G8 1499 aa31.01■■■□□ 2.55
H3F3B-209ENST00000589949 TTBK1Q5TCY1 1321 aaPredicted RBP30.99■■■□□ 2.55
H3F3B-209ENST00000589949 FAM69CQ0P6D2 419 aa30.99■■■□□ 2.55
H3F3B-209ENST00000589949 TNIKQ9UKE5 1360 aa30.96■■■□□ 2.55
H3F3B-209ENST00000589949 CARMIL2Q6F5E8 1435 aa30.96■■■□□ 2.55
H3F3B-209ENST00000589949 DISP1Q96F81 1524 aa30.95■■■□□ 2.55
H3F3B-209ENST00000589949 DIP2BQ9P265 1576 aa30.94■■■□□ 2.54
H3F3B-209ENST00000589949 UGGT2Q9NYU1 1516 aa30.87■■■□□ 2.53
H3F3B-209ENST00000589949 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
H3F3B-209ENST00000589949 UHRF1BP1LA0JNW5 1464 aa30.8■■■□□ 2.52
H3F3B-209ENST00000589949 UACAQ9BZF9 1416 aa30.79■■■□□ 2.52
H3F3B-209ENST00000589949 PRXQ9BXM0 1461 aa30.77■■■□□ 2.52
H3F3B-209ENST00000589949 KIAA0556O60303 1618 aa30.77■■■□□ 2.52
H3F3B-209ENST00000589949 ASXL2Q76L83 1435 aa30.74■■■□□ 2.51
H3F3B-209ENST00000589949 CTTNBP2Q8WZ74 1663 aa30.71■■■□□ 2.51
H3F3B-209ENST00000589949 TSPOAP1O95153 1857 aa30.7■■■□□ 2.51
H3F3B-209ENST00000589949 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
H3F3B-209ENST00000589949 KDM5BQ9UGL1 1544 aa30.68■■■□□ 2.5
H3F3B-209ENST00000589949 PLB1Q6P1J6 1458 aa30.66■■■□□ 2.5
H3F3B-209ENST00000589949 GLI2P10070 1586 aa30.6■■■□□ 2.49
H3F3B-209ENST00000589949 KDM6BO15054 1643 aa30.59■■■□□ 2.49
H3F3B-209ENST00000589949 ZCCHC11Q5TAX3 1644 aaKnown RBP30.59■■■□□ 2.49
H3F3B-209ENST00000589949 PPRC1Q5VV67 1664 aaKnown RBP30.58■■■□□ 2.49
H3F3B-209ENST00000589949 EPRSP07814 1512 aaKnown RBP30.56■■■□□ 2.48
H3F3B-209ENST00000589949 GOLGA3Q08378 1498 aa30.56■■■□□ 2.48
H3F3B-209ENST00000589949 CSRNP3Q8WYN3 585 aa30.54■■■□□ 2.48
H3F3B-209ENST00000589949 ABCA8O94911 1581 aa30.51■■■□□ 2.47
H3F3B-209ENST00000589949 MAP3K4Q9Y6R4 1608 aa30.46■■■□□ 2.47
H3F3B-209ENST00000589949 P3H3Q8IVL6 736 aa30.44■■■□□ 2.46
H3F3B-209ENST00000589949 WDR7Q9Y4E6 1490 aa30.44■■■□□ 2.46
H3F3B-209ENST00000589949 COL17A1Q9UMD9 1497 aaPredicted RBP30.43■■■□□ 2.46
H3F3B-209ENST00000589949 KDM4FA0A1W2PPD8 638 aa30.36■■■□□ 2.45
H3F3B-209ENST00000589949 EEA1Q15075 1411 aa30.35■■■□□ 2.45
H3F3B-209ENST00000589949 FAM9AQ8IZU1 332 aaPredicted RBP30.34■■■□□ 2.45
H3F3B-209ENST00000589949 SAMD9Q5K651 1589 aa30.33■■■□□ 2.45
H3F3B-209ENST00000589949 ARID3CA6NKF2 412 aa30.32■■■□□ 2.44
H3F3B-209ENST00000589949 KCNH8Q96L42 1107 aa30.31■■■□□ 2.44
H3F3B-209ENST00000589949 ATP10BO94823 1461 aa30.28■■■□□ 2.44
H3F3B-209ENST00000589949 TEX14Q8IWB6 1497 aa30.28■■■□□ 2.44
H3F3B-209ENST00000589949 CD109Q6YHK3 1445 aa30.24■■■□□ 2.43
H3F3B-209ENST00000589949 RANGAP1P46060 587 aaPredicted RBP30.23■■■□□ 2.43
H3F3B-209ENST00000589949 MAGI3Q5TCQ9 1506 aa30.21■■■□□ 2.43
H3F3B-209ENST00000589949 CFAP43Q8NDM7 1665 aa30.2■■■□□ 2.42
H3F3B-209ENST00000589949 FHOD3Q2V2M9 1422 aa30.17■■■□□ 2.42
H3F3B-209ENST00000589949 RAPGEF6Q8TEU7 1601 aa30.17■■■□□ 2.42
H3F3B-209ENST00000589949 KIF21BO75037 1637 aa30.15■■■□□ 2.42
H3F3B-209ENST00000589949 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
H3F3B-209ENST00000589949 NUP153P49790 1475 aaKnown RBP30.12■■■□□ 2.41
H3F3B-209ENST00000589949 ADGRL1O94910 1474 aa30.08■■■□□ 2.41
H3F3B-209ENST00000589949 EHMT2Q96KQ7 1210 aa30.05■■■□□ 2.4
H3F3B-209ENST00000589949 ABCA9Q8IUA7 1624 aa30.04■■■□□ 2.4
H3F3B-209ENST00000589949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.01■■■□□ 2.39
H3F3B-209ENST00000589949 HNRNPUL2Q1KMD3 747 aaKnown RBP30.01■■■□□ 2.39
H3F3B-209ENST00000589949 EFCAB5A4FU69 1503 aa29.99■■■□□ 2.39
H3F3B-209ENST00000589949 ARAP3Q8WWN8 1544 aa29.98■■■□□ 2.39
H3F3B-209ENST00000589949 UBTFP17480 764 aaKnown RBP29.92■■■□□ 2.38
H3F3B-209ENST00000589949 PLEKHD1A6NEE1 506 aa29.87■■■□□ 2.37
H3F3B-209ENST00000589949 RAPGEF3O95398 923 aa29.86■■■□□ 2.37
H3F3B-209ENST00000589949 PHLDB1Q86UU1 1377 aa29.85■■■□□ 2.37
H3F3B-209ENST00000589949 NEO1Q92859 1461 aa29.85■■■□□ 2.37
H3F3B-209ENST00000589949 ARHGAP35Q9NRY4 1499 aa29.85■■■□□ 2.37
H3F3B-209ENST00000589949 CDK13Q14004 1512 aaKnown RBP29.85■■■□□ 2.37
H3F3B-209ENST00000589949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.8■■■□□ 2.366e-11■■■□□ 18.3
H3F3B-209ENST00000589949 FRMPD1Q5SYB0 1578 aa29.79■■■□□ 2.36
H3F3B-209ENST00000589949 TTC37Q6PGP7 1564 aa29.77■■■□□ 2.36
H3F3B-209ENST00000589949 FMN1Q68DA7 1419 aa29.73■■■□□ 2.35
H3F3B-209ENST00000589949 FANCAO15360 1455 aa29.7■■■□□ 2.35
H3F3B-209ENST00000589949 ATP1B4Q9UN42 357 aaPredicted RBP29.7■■■□□ 2.35
H3F3B-209ENST00000589949 AKNAQ7Z591 1439 aa29.7■■■□□ 2.34
H3F3B-209ENST00000589949 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
H3F3B-209ENST00000589949 DENND4BO75064 1496 aaPredicted RBP29.65■■■□□ 2.34
H3F3B-209ENST00000589949 RICTORQ6R327 1708 aa29.64■■■□□ 2.34
H3F3B-209ENST00000589949 HECW2Q9P2P5 1572 aa29.61■■■□□ 2.33
H3F3B-209ENST00000589949 LRRIQ1Q96JM4 1722 aa29.6■■■□□ 2.33
H3F3B-209ENST00000589949 PLCH2O75038 1416 aa29.6■■■□□ 2.33
H3F3B-209ENST00000589949 ADAMTSL3P82987 1691 aa29.6■■■□□ 2.33
H3F3B-209ENST00000589949 CFAP74Q9C0B2 1584 aa29.59■■■□□ 2.33
H3F3B-209ENST00000589949 KIF14Q15058 1648 aa29.57■■■□□ 2.32
H3F3B-209ENST00000589949 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
H3F3B-209ENST00000589949 TROQ12816 1431 aaPredicted RBP29.53■■■□□ 2.32
H3F3B-209ENST00000589949 ZMYM4Q5VZL5 1548 aa29.52■■■□□ 2.32
H3F3B-209ENST00000589949 BCORL1Q5H9F3 1711 aa29.52■■■□□ 2.32
H3F3B-209ENST00000589949 YEATS2Q9ULM3 1422 aa29.52■■■□□ 2.32
H3F3B-209ENST00000589949 PTPRMP28827 1452 aa29.51■■■□□ 2.31
H3F3B-209ENST00000589949 CDK11AQ9UQ88 783 aaPredicted RBP29.51■■■□□ 2.31
H3F3B-209ENST00000589949 SCAPERQ9BY12 1400 aa29.51■■■□□ 2.31
H3F3B-209ENST00000589949 ARID4BQ4LE39 1312 aaPredicted RBP29.5■■■□□ 2.31
H3F3B-209ENST00000589949 PCF11O94913 1555 aaKnown RBP29.49■■■□□ 2.31
H3F3B-209ENST00000589949 SIGLEC1Q9BZZ2 1709 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms