RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
H3F3B-208ENST00000589599 PRG4Q92954 1404 aaPredicted RBP28.46■■■□□ 2.15
H3F3B-208ENST00000589599 ERCC6L2Q5T890 1561 aa28.42■■■□□ 2.14
H3F3B-208ENST00000589599 RAPGEF2Q9Y4G8 1499 aa28.42■■■□□ 2.14
H3F3B-208ENST00000589599 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
H3F3B-208ENST00000589599 CSRNP3Q8WYN3 585 aa28.3■■■□□ 2.12
H3F3B-208ENST00000589599 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
H3F3B-208ENST00000589599 EEA1Q15075 1411 aa28.26■■■□□ 2.11
H3F3B-208ENST00000589599 TRHP20396 242 aaPredicted RBP28.25■■■□□ 2.11
H3F3B-208ENST00000589599 CARMIL2Q6F5E8 1435 aa28.23■■■□□ 2.11
H3F3B-208ENST00000589599 IQGAP2Q13576 1575 aa28.23■■■□□ 2.11
H3F3B-208ENST00000589599 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
H3F3B-208ENST00000589599 PTPRGP23470 1445 aa28.14■■■□□ 2.1
H3F3B-208ENST00000589599 TNIKQ9UKE5 1360 aa28.12■■■□□ 2.09
H3F3B-208ENST00000589599 NPM1P06748 294 aaKnown RBP eCLIP28.12■■■□□ 2.09
H3F3B-208ENST00000589599 TTBK1Q5TCY1 1321 aaPredicted RBP28.12■■■□□ 2.09
H3F3B-208ENST00000589599 UGGT2Q9NYU1 1516 aa28.09■■■□□ 2.09
H3F3B-208ENST00000589599 DISP1Q96F81 1524 aa28.05■■■□□ 2.08
H3F3B-208ENST00000589599 CTTNBP2Q8WZ74 1663 aa28.02■■■□□ 2.08
H3F3B-208ENST00000589599 GOLGA3Q08378 1498 aa28■■■□□ 2.07
H3F3B-208ENST00000589599 KIAA0556O60303 1618 aa27.94■■■□□ 2.06
H3F3B-208ENST00000589599 ADCY10Q96PN6 1610 aa27.94■■■□□ 2.06
H3F3B-208ENST00000589599 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
H3F3B-208ENST00000589599 KIF21BO75037 1637 aa27.88■■■□□ 2.05
H3F3B-208ENST00000589599 UHRF1BP1LA0JNW5 1464 aa27.86■■■□□ 2.05
H3F3B-208ENST00000589599 ABCC2Q92887 1545 aa27.84■■■□□ 2.05
H3F3B-208ENST00000589599 P3H3Q8IVL6 736 aa27.84■■■□□ 2.05
H3F3B-208ENST00000589599 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
H3F3B-208ENST00000589599 UBTFP17480 764 aaKnown RBP27.83■■■□□ 2.05
H3F3B-208ENST00000589599 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
H3F3B-208ENST00000589599 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
H3F3B-208ENST00000589599 FAM69CQ0P6D2 419 aa27.8■■■□□ 2.04
H3F3B-208ENST00000589599 ABCC10Q5T3U5 1492 aa27.76■■■□□ 2.03
H3F3B-208ENST00000589599 PLB1Q6P1J6 1458 aa27.73■■■□□ 2.03
H3F3B-208ENST00000589599 KDM5BQ9UGL1 1544 aa27.71■■■□□ 2.03
H3F3B-208ENST00000589599 SAMD9Q5K651 1589 aa27.69■■■□□ 2.02
H3F3B-208ENST00000589599 ASXL2Q76L83 1435 aa27.69■■■□□ 2.02
H3F3B-208ENST00000589599 ABCA8O94911 1581 aa27.66■■■□□ 2.02
H3F3B-208ENST00000589599 KIF13AQ9H1H9 1805 aa27.64■■■□□ 2.01
H3F3B-208ENST00000589599 DIP2BQ9P265 1576 aa27.64■■■□□ 2.01
H3F3B-208ENST00000589599 EFCAB5A4FU69 1503 aa27.61■■■□□ 2.01
H3F3B-208ENST00000589599 FHOD3Q2V2M9 1422 aa27.6■■■□□ 2.01
H3F3B-208ENST00000589599 ZCCHC11Q5TAX3 1644 aaKnown RBP27.59■■■□□ 2.01
H3F3B-208ENST00000589599 ARID3CA6NKF2 412 aa27.55■■■□□ 2
H3F3B-208ENST00000589599 WDR7Q9Y4E6 1490 aa27.51■■■□□ 2
H3F3B-208ENST00000589599 EPRSP07814 1512 aaKnown RBP27.51■■□□□ 1.99
H3F3B-208ENST00000589599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.5■■□□□ 1.99
H3F3B-208ENST00000589599 HNRNPUL2Q1KMD3 747 aaKnown RBP27.5■■□□□ 1.99
H3F3B-208ENST00000589599 GLI2P10070 1586 aa27.5■■□□□ 1.99
H3F3B-208ENST00000589599 ATP10BO94823 1461 aa27.5■■□□□ 1.99
H3F3B-208ENST00000589599 KCNH8Q96L42 1107 aa27.49■■□□□ 1.99
H3F3B-208ENST00000589599 RAPGEF6Q8TEU7 1601 aa27.49■■□□□ 1.99
H3F3B-208ENST00000589599 ARHGAP35Q9NRY4 1499 aa27.44■■□□□ 1.98
H3F3B-208ENST00000589599 FMN1Q68DA7 1419 aa27.41■■□□□ 1.98
H3F3B-208ENST00000589599 NUP153P49790 1475 aaKnown RBP27.41■■□□□ 1.98
H3F3B-208ENST00000589599 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
H3F3B-208ENST00000589599 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
H3F3B-208ENST00000589599 PLEKHD1A6NEE1 506 aa27.35■■□□□ 1.97
H3F3B-208ENST00000589599 CD109Q6YHK3 1445 aa27.33■■□□□ 1.96
H3F3B-208ENST00000589599 TEX14Q8IWB6 1497 aa27.32■■□□□ 1.96
H3F3B-208ENST00000589599 MAP3K4Q9Y6R4 1608 aa27.32■■□□□ 1.96
H3F3B-208ENST00000589599 CLIP1P30622 1438 aa27.29■■□□□ 1.96
H3F3B-208ENST00000589599 KDM6BO15054 1643 aa27.27■■□□□ 1.96
H3F3B-208ENST00000589599 PPRC1Q5VV67 1664 aaKnown RBP27.24■■□□□ 1.95
H3F3B-208ENST00000589599 MAGI3Q5TCQ9 1506 aa27.23■■□□□ 1.95
H3F3B-208ENST00000589599 CDK11AQ9UQ88 783 aaPredicted RBP27.23■■□□□ 1.95
H3F3B-208ENST00000589599 CFAP43Q8NDM7 1665 aa27.23■■□□□ 1.95
H3F3B-208ENST00000589599 HECW1Q76N89 1606 aa27.22■■□□□ 1.95
H3F3B-208ENST00000589599 CDK13Q14004 1512 aaKnown RBP27.19■■□□□ 1.94
H3F3B-208ENST00000589599 LOC105371045A0A1W2PR82 267 aa27.17■■□□□ 1.94
H3F3B-208ENST00000589599 CASKIN1Q8WXD9 1431 aa27.16■■□□□ 1.94
H3F3B-208ENST00000589599 ABCA9Q8IUA7 1624 aa27.16■■□□□ 1.94
H3F3B-208ENST00000589599 CEP162Q5TB80 1403 aa27.11■■□□□ 1.93
H3F3B-208ENST00000589599 COL17A1Q9UMD9 1497 aaPredicted RBP27.11■■□□□ 1.93
H3F3B-208ENST00000589599 PHLDB1Q86UU1 1377 aa27.1■■□□□ 1.93
H3F3B-208ENST00000589599 CCDC18Q5T9S5 1454 aa27.06■■□□□ 1.92
H3F3B-208ENST00000589599 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
H3F3B-208ENST00000589599 PCF11O94913 1555 aaKnown RBP27.05■■□□□ 1.92
H3F3B-208ENST00000589599 TROQ12816 1431 aaPredicted RBP27.03■■□□□ 1.92
H3F3B-208ENST00000589599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.03■■□□□ 1.926e-11■■■□□ 18.3
H3F3B-208ENST00000589599 NEO1Q92859 1461 aa27.02■■□□□ 1.92
H3F3B-208ENST00000589599 ARAP3Q8WWN8 1544 aa27■■□□□ 1.91
H3F3B-208ENST00000589599 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
H3F3B-208ENST00000589599 TTC37Q6PGP7 1564 aa26.95■■□□□ 1.9
H3F3B-208ENST00000589599 FANCAO15360 1455 aa26.94■■□□□ 1.9
H3F3B-208ENST00000589599 LRRIQ1Q96JM4 1722 aa26.94■■□□□ 1.9
H3F3B-208ENST00000589599 PLCH2O75038 1416 aa26.94■■□□□ 1.9
H3F3B-208ENST00000589599 KIF14Q15058 1648 aa26.93■■□□□ 1.9
H3F3B-208ENST00000589599 AKNAQ7Z591 1439 aa26.92■■□□□ 1.9
H3F3B-208ENST00000589599 RAPGEF3O95398 923 aa26.92■■□□□ 1.9
H3F3B-208ENST00000589599 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
H3F3B-208ENST00000589599 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
H3F3B-208ENST00000589599 DENND4BO75064 1496 aaPredicted RBP26.86■■□□□ 1.89
H3F3B-208ENST00000589599 MTUS2Q5JR59 1369 aa26.83■■□□□ 1.88
H3F3B-208ENST00000589599 MYO5CQ9NQX4 1742 aa26.8■■□□□ 1.88
H3F3B-208ENST00000589599 ADGRL1O94910 1474 aa26.8■■□□□ 1.88
H3F3B-208ENST00000589599 VPS8Q8N3P4 1428 aa26.79■■□□□ 1.88
H3F3B-208ENST00000589599 SCAPERQ9BY12 1400 aa26.79■■□□□ 1.88
H3F3B-208ENST00000589599 ARHGAP5Q13017 1502 aa26.79■■□□□ 1.88
H3F3B-208ENST00000589599 KDM4FA0A1W2PPD8 638 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms