RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 KIAA0586Q9BVV6 1533 aa23.55■■□□□ 1.36
ERCC1-208ENST00000589165 ERCC6L2Q5T890 1561 aa23.53■■□□□ 1.36
ERCC1-208ENST00000589165 PRG4Q92954 1404 aaPredicted RBP23.51■■□□□ 1.35
ERCC1-208ENST00000589165 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
ERCC1-208ENST00000589165 PRXQ9BXM0 1461 aa23.36■■□□□ 1.33
ERCC1-208ENST00000589165 IQGAP2Q13576 1575 aa23.34■■□□□ 1.33
ERCC1-208ENST00000589165 EEA1Q15075 1411 aa23.31■■□□□ 1.32
ERCC1-208ENST00000589165 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
ERCC1-208ENST00000589165 CARMIL2Q6F5E8 1435 aa23.29■■□□□ 1.32
ERCC1-208ENST00000589165 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
ERCC1-208ENST00000589165 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
ERCC1-208ENST00000589165 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
ERCC1-208ENST00000589165 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
ERCC1-208ENST00000589165 PTPRGP23470 1445 aa23.23■■□□□ 1.31
ERCC1-208ENST00000589165 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
ERCC1-208ENST00000589165 NPM1P06748 294 aaKnown RBP eCLIP23.14■■□□□ 1.29
ERCC1-208ENST00000589165 ADCY10Q96PN6 1610 aa23.13■■□□□ 1.29
ERCC1-208ENST00000589165 CTTNBP2Q8WZ74 1663 aa23.13■■□□□ 1.29
ERCC1-208ENST00000589165 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
ERCC1-208ENST00000589165 KIAA0556O60303 1618 aa23.11■■□□□ 1.29
ERCC1-208ENST00000589165 GOLGA3Q08378 1498 aa23.1■■□□□ 1.29
ERCC1-208ENST00000589165 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
ERCC1-208ENST00000589165 MAPKBP1O60336 1514 aa23.07■■□□□ 1.28
ERCC1-208ENST00000589165 UHRF1BP1LA0JNW5 1464 aa23.07■■□□□ 1.28
ERCC1-208ENST00000589165 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
ERCC1-208ENST00000589165 ABCC2Q92887 1545 aa23.04■■□□□ 1.28
ERCC1-208ENST00000589165 KIF21BO75037 1637 aa23.01■■□□□ 1.27
ERCC1-208ENST00000589165 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
ERCC1-208ENST00000589165 KDM5BQ9UGL1 1544 aa22.95■■□□□ 1.26
ERCC1-208ENST00000589165 FAM69CQ0P6D2 419 aa22.94■■□□□ 1.26
ERCC1-208ENST00000589165 PLB1Q6P1J6 1458 aa22.92■■□□□ 1.26
ERCC1-208ENST00000589165 SAMD9Q5K651 1589 aa22.91■■□□□ 1.26
ERCC1-208ENST00000589165 DIP2BQ9P265 1576 aa22.9■■□□□ 1.26
ERCC1-208ENST00000589165 KIF13AQ9H1H9 1805 aa22.89■■□□□ 1.26
ERCC1-208ENST00000589165 ASXL2Q76L83 1435 aa22.89■■□□□ 1.26
ERCC1-208ENST00000589165 P3H3Q8IVL6 736 aa22.89■■□□□ 1.25
ERCC1-208ENST00000589165 ABCA8O94911 1581 aa22.88■■□□□ 1.25
ERCC1-208ENST00000589165 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
ERCC1-208ENST00000589165 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
ERCC1-208ENST00000589165 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
ERCC1-208ENST00000589165 EFCAB5A4FU69 1503 aa22.8■■□□□ 1.24
ERCC1-208ENST00000589165 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
ERCC1-208ENST00000589165 GLI2P10070 1586 aa22.78■■□□□ 1.24
ERCC1-208ENST00000589165 FHOD3Q2V2M9 1422 aa22.77■■□□□ 1.24
ERCC1-208ENST00000589165 EPRSP07814 1512 aaKnown RBP22.76■■□□□ 1.23
ERCC1-208ENST00000589165 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
ERCC1-208ENST00000589165 ATP10BO94823 1461 aa22.71■■□□□ 1.23
ERCC1-208ENST00000589165 RAPGEF6Q8TEU7 1601 aa22.7■■□□□ 1.22
ERCC1-208ENST00000589165 NUP153P49790 1475 aaKnown RBP22.67■■□□□ 1.22
ERCC1-208ENST00000589165 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
ERCC1-208ENST00000589165 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
ERCC1-208ENST00000589165 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
ERCC1-208ENST00000589165 MAP3K4Q9Y6R4 1608 aa22.63■■□□□ 1.21
ERCC1-208ENST00000589165 FMN1Q68DA7 1419 aa22.62■■□□□ 1.21
ERCC1-208ENST00000589165 TSPOAP1O95153 1857 aa22.6■■□□□ 1.21
ERCC1-208ENST00000589165 PPRC1Q5VV67 1664 aaKnown RBP22.59■■□□□ 1.21
ERCC1-208ENST00000589165 TEX14Q8IWB6 1497 aa22.58■■□□□ 1.21
ERCC1-208ENST00000589165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.58■■□□□ 1.2
ERCC1-208ENST00000589165 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.2
ERCC1-208ENST00000589165 CD109Q6YHK3 1445 aa22.57■■□□□ 1.2
ERCC1-208ENST00000589165 KDM6BO15054 1643 aa22.55■■□□□ 1.2
ERCC1-208ENST00000589165 MAGI3Q5TCQ9 1506 aa22.54■■□□□ 1.2
ERCC1-208ENST00000589165 PLEKHD1A6NEE1 506 aa22.53■■□□□ 1.2
ERCC1-208ENST00000589165 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
ERCC1-208ENST00000589165 CLIP1P30622 1438 aa22.48■■□□□ 1.19
ERCC1-208ENST00000589165 ABCA9Q8IUA7 1624 aa22.47■■□□□ 1.19
ERCC1-208ENST00000589165 COL17A1Q9UMD9 1497 aaPredicted RBP22.47■■□□□ 1.19
ERCC1-208ENST00000589165 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
ERCC1-208ENST00000589165 CDK13Q14004 1512 aaKnown RBP22.45■■□□□ 1.18
ERCC1-208ENST00000589165 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
ERCC1-208ENST00000589165 CASKIN1Q8WXD9 1431 aa22.42■■□□□ 1.18
ERCC1-208ENST00000589165 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
ERCC1-208ENST00000589165 PHLDB1Q86UU1 1377 aa22.4■■□□□ 1.18
ERCC1-208ENST00000589165 ARAP3Q8WWN8 1544 aa22.36■■□□□ 1.17
ERCC1-208ENST00000589165 NEO1Q92859 1461 aa22.36■■□□□ 1.17
ERCC1-208ENST00000589165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.35■■□□□ 1.17
ERCC1-208ENST00000589165 PCF11O94913 1555 aaKnown RBP22.34■■□□□ 1.17
ERCC1-208ENST00000589165 FYCO1Q9BQS8 1478 aa22.34■■□□□ 1.17
ERCC1-208ENST00000589165 CEP162Q5TB80 1403 aa22.34■■□□□ 1.17
ERCC1-208ENST00000589165 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.17
ERCC1-208ENST00000589165 TROQ12816 1431 aaPredicted RBP22.32■■□□□ 1.16
ERCC1-208ENST00000589165 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
ERCC1-208ENST00000589165 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
ERCC1-208ENST00000589165 TTC37Q6PGP7 1564 aa22.29■■□□□ 1.16
ERCC1-208ENST00000589165 PLCH2O75038 1416 aa22.27■■□□□ 1.16
ERCC1-208ENST00000589165 FANCAO15360 1455 aa22.25■■□□□ 1.15
ERCC1-208ENST00000589165 AKNAQ7Z591 1439 aa22.24■■□□□ 1.15
ERCC1-208ENST00000589165 KIF14Q15058 1648 aa22.23■■□□□ 1.15
ERCC1-208ENST00000589165 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
ERCC1-208ENST00000589165 RAPGEF3O95398 923 aa22.22■■□□□ 1.15
ERCC1-208ENST00000589165 CFAP74Q9C0B2 1584 aa22.2■■□□□ 1.14
ERCC1-208ENST00000589165 KDM4FA0A1W2PPD8 638 aa22.18■■□□□ 1.14
ERCC1-208ENST00000589165 EFCAB2Q5VUJ9 269 aa22.18■■□□□ 1.14
ERCC1-208ENST00000589165 DENND4BO75064 1496 aaPredicted RBP22.18■■□□□ 1.14
ERCC1-208ENST00000589165 FRMPD1Q5SYB0 1578 aa22.14■■□□□ 1.13
ERCC1-208ENST00000589165 ADGRL1O94910 1474 aa22.12■■□□□ 1.13
ERCC1-208ENST00000589165 MYO5CQ9NQX4 1742 aa22.12■■□□□ 1.13
ERCC1-208ENST00000589165 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
ERCC1-208ENST00000589165 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
ERCC1-208ENST00000589165 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms