RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
CLPTM1-210ENST00000589158 SHROOM2Q13796 1616 aa23.75■■□□□ 1.39
CLPTM1-210ENST00000589158 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
CLPTM1-210ENST00000589158 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
CLPTM1-210ENST00000589158 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
CLPTM1-210ENST00000589158 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
CLPTM1-210ENST00000589158 PRXQ9BXM0 1461 aa23.58■■□□□ 1.37
CLPTM1-210ENST00000589158 FAM9AQ8IZU1 332 aaPredicted RBP23.58■■□□□ 1.37
CLPTM1-210ENST00000589158 TRHP20396 242 aaPredicted RBP23.57■■□□□ 1.36
CLPTM1-210ENST00000589158 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
CLPTM1-210ENST00000589158 EEA1Q15075 1411 aa23.55■■□□□ 1.36
CLPTM1-210ENST00000589158 CARMIL2Q6F5E8 1435 aa23.52■■□□□ 1.36
CLPTM1-210ENST00000589158 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
CLPTM1-210ENST00000589158 PTPRGP23470 1445 aa23.46■■□□□ 1.35
CLPTM1-210ENST00000589158 TNIKQ9UKE5 1360 aa23.45■■□□□ 1.34
CLPTM1-210ENST00000589158 UGGT2Q9NYU1 1516 aa23.43■■□□□ 1.34
CLPTM1-210ENST00000589158 NPM1P06748 294 aaKnown RBP eCLIP23.42■■□□□ 1.34
CLPTM1-210ENST00000589158 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
CLPTM1-210ENST00000589158 CTTNBP2Q8WZ74 1663 aa23.38■■□□□ 1.33
CLPTM1-210ENST00000589158 KIAA0556O60303 1618 aa23.33■■□□□ 1.33
CLPTM1-210ENST00000589158 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
CLPTM1-210ENST00000589158 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.32
CLPTM1-210ENST00000589158 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
CLPTM1-210ENST00000589158 UACAQ9BZF9 1416 aa23.28■■□□□ 1.32
CLPTM1-210ENST00000589158 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
CLPTM1-210ENST00000589158 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
CLPTM1-210ENST00000589158 KIF21BO75037 1637 aa23.26■■□□□ 1.31
CLPTM1-210ENST00000589158 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
CLPTM1-210ENST00000589158 UHRF1BP1LA0JNW5 1464 aa23.23■■□□□ 1.31
CLPTM1-210ENST00000589158 ABCC2Q92887 1545 aa23.22■■□□□ 1.31
CLPTM1-210ENST00000589158 MAPKBP1O60336 1514 aa23.21■■□□□ 1.31
CLPTM1-210ENST00000589158 FAM69CQ0P6D2 419 aa23.19■■□□□ 1.3
CLPTM1-210ENST00000589158 PLB1Q6P1J6 1458 aa23.17■■□□□ 1.3
CLPTM1-210ENST00000589158 ABCC10Q5T3U5 1492 aa23.15■■□□□ 1.3
CLPTM1-210ENST00000589158 SAMD9Q5K651 1589 aa23.12■■□□□ 1.29
CLPTM1-210ENST00000589158 ASXL2Q76L83 1435 aa23.11■■□□□ 1.29
CLPTM1-210ENST00000589158 KDM5BQ9UGL1 1544 aa23.11■■□□□ 1.29
CLPTM1-210ENST00000589158 ABCA8O94911 1581 aa23.09■■□□□ 1.29
CLPTM1-210ENST00000589158 DIP2BQ9P265 1576 aa23.07■■□□□ 1.28
CLPTM1-210ENST00000589158 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
CLPTM1-210ENST00000589158 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
CLPTM1-210ENST00000589158 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
CLPTM1-210ENST00000589158 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
CLPTM1-210ENST00000589158 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
CLPTM1-210ENST00000589158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
CLPTM1-210ENST00000589158 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
CLPTM1-210ENST00000589158 WDR7Q9Y4E6 1490 aa22.96■■□□□ 1.27
CLPTM1-210ENST00000589158 EPRSP07814 1512 aaKnown RBP22.96■■□□□ 1.27
CLPTM1-210ENST00000589158 KCNH8Q96L42 1107 aa22.95■■□□□ 1.26
CLPTM1-210ENST00000589158 RAPGEF6Q8TEU7 1601 aa22.94■■□□□ 1.26
CLPTM1-210ENST00000589158 ATP10BO94823 1461 aa22.94■■□□□ 1.26
CLPTM1-210ENST00000589158 ARHGAP35Q9NRY4 1499 aa22.92■■□□□ 1.26
CLPTM1-210ENST00000589158 GLI2P10070 1586 aa22.92■■□□□ 1.26
CLPTM1-210ENST00000589158 NUP153P49790 1475 aaKnown RBP22.89■■□□□ 1.25
CLPTM1-210ENST00000589158 ATP1B4Q9UN42 357 aaPredicted RBP22.88■■□□□ 1.25
CLPTM1-210ENST00000589158 FMN1Q68DA7 1419 aa22.86■■□□□ 1.25
CLPTM1-210ENST00000589158 TSPOAP1O95153 1857 aa22.84■■□□□ 1.25
CLPTM1-210ENST00000589158 PLEKHD1A6NEE1 506 aa22.8■■□□□ 1.24
CLPTM1-210ENST00000589158 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
CLPTM1-210ENST00000589158 CLIP1P30622 1438 aa22.79■■□□□ 1.24
CLPTM1-210ENST00000589158 CD109Q6YHK3 1445 aa22.79■■□□□ 1.24
CLPTM1-210ENST00000589158 TEX14Q8IWB6 1497 aa22.77■■□□□ 1.24
CLPTM1-210ENST00000589158 KDM6BO15054 1643 aa22.75■■□□□ 1.23
CLPTM1-210ENST00000589158 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
CLPTM1-210ENST00000589158 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
CLPTM1-210ENST00000589158 HECW1Q76N89 1606 aa22.72■■□□□ 1.23
CLPTM1-210ENST00000589158 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
CLPTM1-210ENST00000589158 CFAP43Q8NDM7 1665 aa22.71■■□□□ 1.23
CLPTM1-210ENST00000589158 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
CLPTM1-210ENST00000589158 CDK11AQ9UQ88 783 aaPredicted RBP22.68■■□□□ 1.22
CLPTM1-210ENST00000589158 CASKIN1Q8WXD9 1431 aa22.66■■□□□ 1.22
CLPTM1-210ENST00000589158 ABCA9Q8IUA7 1624 aa22.65■■□□□ 1.22
CLPTM1-210ENST00000589158 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
CLPTM1-210ENST00000589158 COL17A1Q9UMD9 1497 aaPredicted RBP22.64■■□□□ 1.21
CLPTM1-210ENST00000589158 PCF11O94913 1555 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-210ENST00000589158 FYCO1Q9BQS8 1478 aa22.59■■□□□ 1.21
CLPTM1-210ENST00000589158 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
CLPTM1-210ENST00000589158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.57■■□□□ 1.2
CLPTM1-210ENST00000589158 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
CLPTM1-210ENST00000589158 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
CLPTM1-210ENST00000589158 NEO1Q92859 1461 aa22.53■■□□□ 1.2
CLPTM1-210ENST00000589158 TTC37Q6PGP7 1564 aa22.52■■□□□ 1.2
CLPTM1-210ENST00000589158 ARAP3Q8WWN8 1544 aa22.51■■□□□ 1.19
CLPTM1-210ENST00000589158 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
CLPTM1-210ENST00000589158 FANCAO15360 1455 aa22.48■■□□□ 1.19
CLPTM1-210ENST00000589158 KIF14Q15058 1648 aa22.47■■□□□ 1.19
CLPTM1-210ENST00000589158 RAPGEF3O95398 923 aa22.47■■□□□ 1.19
CLPTM1-210ENST00000589158 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
CLPTM1-210ENST00000589158 PLCH2O75038 1416 aa22.47■■□□□ 1.19
CLPTM1-210ENST00000589158 AKNAQ7Z591 1439 aa22.46■■□□□ 1.19
CLPTM1-210ENST00000589158 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
CLPTM1-210ENST00000589158 CFAP74Q9C0B2 1584 aa22.41■■□□□ 1.18
CLPTM1-210ENST00000589158 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
CLPTM1-210ENST00000589158 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
CLPTM1-210ENST00000589158 VPS8Q8N3P4 1428 aa22.37■■□□□ 1.17
CLPTM1-210ENST00000589158 ARHGAP5Q13017 1502 aa22.36■■□□□ 1.17
CLPTM1-210ENST00000589158 ADGRL1O94910 1474 aa22.36■■□□□ 1.17
CLPTM1-210ENST00000589158 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
CLPTM1-210ENST00000589158 MYO5CQ9NQX4 1742 aa22.36■■□□□ 1.17
CLPTM1-210ENST00000589158 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms