RNA–Protein interactions for RNA: ENST00000589073.1

PDE4A-206, Transcript of phosphodiesterase 4A, humanhuman

TSL 5

Gene PDE4A, Length 1,703 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-206ENST00000589073 RANGAP1P46060 587 aaPredicted RBP31.38■■■□□ 2.61
PDE4A-206ENST00000589073 CLIP1P30622 1438 aa31.36■■■□□ 2.61
PDE4A-206ENST00000589073 CHD1O14646 1710 aa31.3■■■□□ 2.6
PDE4A-206ENST00000589073 CEP170Q5SW79 1584 aa31.28■■■□□ 2.6
PDE4A-206ENST00000589073 NUP160Q12769 1436 aa31.27■■■□□ 2.6
PDE4A-206ENST00000589073 KIAA0586Q9BVV6 1533 aa31.24■■■□□ 2.59
PDE4A-206ENST00000589073 IQGAP2Q13576 1575 aa31.22■■■□□ 2.59
PDE4A-206ENST00000589073 ARHGAP35Q9NRY4 1499 aa31.2■■■□□ 2.58
PDE4A-206ENST00000589073 ARAP1Q96P48 1450 aa31.11■■■□□ 2.57
PDE4A-206ENST00000589073 EFCAB5A4FU69 1503 aa31.1■■■□□ 2.57
PDE4A-206ENST00000589073 UGGT2Q9NYU1 1516 aa31.08■■■□□ 2.57
PDE4A-206ENST00000589073 P3H3Q8IVL6 736 aa31.07■■■□□ 2.56
PDE4A-206ENST00000589073 SAMD9Q5K651 1589 aa31.07■■■□□ 2.56
PDE4A-206ENST00000589073 JPH4Q96JJ6 628 aa31.03■■■□□ 2.56
PDE4A-206ENST00000589073 VPS8Q8N3P4 1428 aa31.02■■■□□ 2.56
PDE4A-206ENST00000589073 FHOD3Q2V2M9 1422 aa31■■■□□ 2.55
PDE4A-206ENST00000589073 DISP1Q96F81 1524 aa30.96■■■□□ 2.55
PDE4A-206ENST00000589073 CLASP1Q7Z460 1538 aa30.95■■■□□ 2.55
PDE4A-206ENST00000589073 KIAA0556O60303 1618 aa30.91■■■□□ 2.54
PDE4A-206ENST00000589073 OSCARQ8IYS5 282 aa30.9■■■□□ 2.54
PDE4A-206ENST00000589073 SHROOM2Q13796 1616 aa30.88■■■□□ 2.53
PDE4A-206ENST00000589073 CARMIL2Q6F5E8 1435 aa30.85■■■□□ 2.53
PDE4A-206ENST00000589073 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
PDE4A-206ENST00000589073 FMN1Q68DA7 1419 aa30.82■■■□□ 2.53
PDE4A-206ENST00000589073 PCF11O94913 1555 aaKnown RBP30.74■■■□□ 2.51
PDE4A-206ENST00000589073 CASKIN1Q8WXD9 1431 aa30.73■■■□□ 2.51
PDE4A-206ENST00000589073 TTBK1Q5TCY1 1321 aaPredicted RBP30.72■■■□□ 2.51
PDE4A-206ENST00000589073 ERCC6L2Q5T890 1561 aa30.71■■■□□ 2.51
PDE4A-206ENST00000589073 APLP2Q06481 763 aa30.68■■■□□ 2.5
PDE4A-206ENST00000589073 FYCO1Q9BQS8 1478 aa30.68■■■□□ 2.5
PDE4A-206ENST00000589073 PPARGC1BQ86YN6 1023 aaKnown RBP30.67■■■□□ 2.5
PDE4A-206ENST00000589073 ATP1B4Q9UN42 357 aaPredicted RBP30.66■■■□□ 2.5
PDE4A-206ENST00000589073 PTPRGP23470 1445 aa30.61■■■□□ 2.49
PDE4A-206ENST00000589073 PLB1Q6P1J6 1458 aa30.56■■■□□ 2.48
PDE4A-206ENST00000589073 MAP3K1Q13233 1512 aa30.56■■■□□ 2.48
PDE4A-206ENST00000589073 RAPGEF6Q8TEU7 1601 aa30.56■■■□□ 2.48
PDE4A-206ENST00000589073 HECW1Q76N89 1606 aa30.54■■■□□ 2.48
PDE4A-206ENST00000589073 LRRIQ1Q96JM4 1722 aa30.54■■■□□ 2.48
PDE4A-206ENST00000589073 TIAM1Q13009 1591 aa30.53■■■□□ 2.48
PDE4A-206ENST00000589073 KANK4Q5T7N3 995 aaPredicted RBP30.51■■■□□ 2.47
PDE4A-206ENST00000589073 ABCA8O94911 1581 aa30.51■■■□□ 2.47
PDE4A-206ENST00000589073 CFAP43Q8NDM7 1665 aa30.49■■■□□ 2.47
PDE4A-206ENST00000589073 NUP153P49790 1475 aaKnown RBP30.48■■■□□ 2.47
PDE4A-206ENST00000589073 EPRSP07814 1512 aaKnown RBP30.47■■■□□ 2.47
PDE4A-206ENST00000589073 CCDC18Q5T9S5 1454 aa30.44■■■□□ 2.46
PDE4A-206ENST00000589073 UACAQ9BZF9 1416 aa30.43■■■□□ 2.46
PDE4A-206ENST00000589073 ARID3CA6NKF2 412 aa30.42■■■□□ 2.46
PDE4A-206ENST00000589073 LRRC9Q6ZRR7 1453 aa30.41■■■□□ 2.46
PDE4A-206ENST00000589073 CDK13Q14004 1512 aaKnown RBP30.4■■■□□ 2.46
PDE4A-206ENST00000589073 ARHGEF11O15085 1522 aa30.36■■■□□ 2.45
PDE4A-206ENST00000589073 ABCC2Q92887 1545 aa30.34■■■□□ 2.45
PDE4A-206ENST00000589073 ATP10BO94823 1461 aa30.31■■■□□ 2.44
PDE4A-206ENST00000589073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.3■■■□□ 2.44
PDE4A-206ENST00000589073 HNRNPUL2Q1KMD3 747 aaKnown RBP30.3■■■□□ 2.44
PDE4A-206ENST00000589073 UHRF1BP1LA0JNW5 1464 aa30.3■■■□□ 2.44
PDE4A-206ENST00000589073 MTUS2Q5JR59 1369 aa30.29■■■□□ 2.44
PDE4A-206ENST00000589073 TRIM26Q12899 539 aaPredicted RBP30.29■■■□□ 2.44
PDE4A-206ENST00000589073 MAGI3Q5TCQ9 1506 aa30.29■■■□□ 2.44
PDE4A-206ENST00000589073 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
PDE4A-206ENST00000589073 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
PDE4A-206ENST00000589073 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
PDE4A-206ENST00000589073 EHBP1L1Q8N3D4 1523 aa30.23■■■□□ 2.43
PDE4A-206ENST00000589073 CDK11AQ9UQ88 783 aaPredicted RBP30.23■■■□□ 2.43
PDE4A-206ENST00000589073 ADCY10Q96PN6 1610 aa30.21■■■□□ 2.43
PDE4A-206ENST00000589073 KDM5BQ9UGL1 1544 aa30.18■■■□□ 2.42
PDE4A-206ENST00000589073 PCGF6Q9BYE7 350 aa30.15■■■□□ 2.42
PDE4A-206ENST00000589073 TROQ12816 1431 aaPredicted RBP30.14■■■□□ 2.42
PDE4A-206ENST00000589073 PLEKHD1A6NEE1 506 aa30.14■■■□□ 2.42
PDE4A-206ENST00000589073 SUPT6HQ7KZ85 1726 aaKnown RBP30.14■■■□□ 2.42
PDE4A-206ENST00000589073 ZCCHC11Q5TAX3 1644 aaKnown RBP30.13■■■□□ 2.41
PDE4A-206ENST00000589073 PHLDB1Q86UU1 1377 aa30.12■■■□□ 2.41
PDE4A-206ENST00000589073 NCOA2Q15596 1464 aa30.11■■■□□ 2.41
PDE4A-206ENST00000589073 CYB5RLQ6IPT4 315 aa30.1■■■□□ 2.41
PDE4A-206ENST00000589073 RRBP1Q9P2E9 1410 aaKnown RBP30.02■■■□□ 2.4
PDE4A-206ENST00000589073 KIF14Q15058 1648 aa30.01■■■□□ 2.39
PDE4A-206ENST00000589073 NPM1P06748 294 aaKnown RBP eCLIP29.99■■■□□ 2.39
PDE4A-206ENST00000589073 MYOM3Q5VTT5 1437 aa29.96■■■□□ 2.39
PDE4A-206ENST00000589073 CCNB3Q8WWL7 1395 aa29.95■■■□□ 2.39
PDE4A-206ENST00000589073 FGD6Q6ZV73 1430 aa29.92■■■□□ 2.38
PDE4A-206ENST00000589073 ABCC10Q5T3U5 1492 aa29.91■■■□□ 2.38
PDE4A-206ENST00000589073 KCNH8Q96L42 1107 aa29.91■■■□□ 2.38
PDE4A-206ENST00000589073 ASXL2Q76L83 1435 aa29.9■■■□□ 2.38
PDE4A-206ENST00000589073 WDR7Q9Y4E6 1490 aa29.89■■■□□ 2.38
PDE4A-206ENST00000589073 GPATCH8Q9UKJ3 1502 aaKnown RBP29.85■■■□□ 2.37
PDE4A-206ENST00000589073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.84■■■□□ 2.371e-6■□□□□ 10.3
PDE4A-206ENST00000589073 MIA2Q96PC5 1412 aa29.83■■■□□ 2.37
PDE4A-206ENST00000589073 FAM50AQ14320 339 aaKnown RBP29.83■■■□□ 2.37
PDE4A-206ENST00000589073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.81■■■□□ 2.36
PDE4A-206ENST00000589073 CDC42BPAQ5VT25 1732 aa29.81■■■□□ 2.36
PDE4A-206ENST00000589073 PTPN23Q9H3S7 1636 aa29.8■■■□□ 2.36
PDE4A-206ENST00000589073 ITSN2Q9NZM3 1697 aa29.8■■■□□ 2.36
PDE4A-206ENST00000589073 TTC37Q6PGP7 1564 aa29.8■■■□□ 2.36
PDE4A-206ENST00000589073 CFDP1Q9UEE9 299 aaPredicted RBP29.77■■■□□ 2.36
PDE4A-206ENST00000589073 MAPKBP1O60336 1514 aa29.76■■■□□ 2.35
PDE4A-206ENST00000589073 TCOF1Q13428 1488 aaKnown RBP29.76■■■□□ 2.35
PDE4A-206ENST00000589073 DNAJC5Q9H3Z4 198 aa29.75■■■□□ 2.35
PDE4A-206ENST00000589073 PREX2Q70Z35 1606 aa29.71■■■□□ 2.35
PDE4A-206ENST00000589073 ZNF644Q9H582 1327 aaPredicted RBP29.71■■■□□ 2.35
PDE4A-206ENST00000589073 ITGAEP38570 1179 aa29.71■■■□□ 2.35
PDE4A-206ENST00000589073 CDC42BPBQ9Y5S2 1711 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms