RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 RUSC2Q8N2Y8 1516 aa37.37■■■■□ 3.57
NEDD4L-225ENST00000589054 KIAA0586Q9BVV6 1533 aa37.23■■■■□ 3.55
NEDD4L-225ENST00000589054 CARMIL1Q5VZK9 1371 aa37.17■■■■□ 3.54
NEDD4L-225ENST00000589054 CUL7Q14999 1698 aa37.17■■■■□ 3.54
NEDD4L-225ENST00000589054 ADCY10Q96PN6 1610 aa37.03■■■■□ 3.52
NEDD4L-225ENST00000589054 KIF13AQ9H1H9 1805 aa37.01■■■■□ 3.52
NEDD4L-225ENST00000589054 NPM1P06748 294 aaKnown RBP eCLIP36.95■■■■□ 3.51
NEDD4L-225ENST00000589054 FAM69CQ0P6D2 419 aa36.94■■■■□ 3.5
NEDD4L-225ENST00000589054 ABCC10Q5T3U5 1492 aa36.94■■■■□ 3.5
NEDD4L-225ENST00000589054 MAPKBP1O60336 1514 aa36.9■■■■□ 3.5
NEDD4L-225ENST00000589054 TTBK1Q5TCY1 1321 aaPredicted RBP36.9■■■■□ 3.5
NEDD4L-225ENST00000589054 PTPRGP23470 1445 aa36.9■■■■□ 3.5
NEDD4L-225ENST00000589054 TNIKQ9UKE5 1360 aa36.82■■■■□ 3.49
NEDD4L-225ENST00000589054 IQGAP2Q13576 1575 aa36.82■■■■□ 3.48
NEDD4L-225ENST00000589054 DIP2BQ9P265 1576 aa36.8■■■■□ 3.48
NEDD4L-225ENST00000589054 RAPGEF2Q9Y4G8 1499 aa36.79■■■■□ 3.48
NEDD4L-225ENST00000589054 CARMIL2Q6F5E8 1435 aa36.78■■■■□ 3.48
NEDD4L-225ENST00000589054 DISP1Q96F81 1524 aa36.77■■■■□ 3.48
NEDD4L-225ENST00000589054 AEBP2Q6ZN18 517 aaPredicted RBP36.71■■■■□ 3.47
NEDD4L-225ENST00000589054 ABCC2Q92887 1545 aa36.66■■■■□ 3.46
NEDD4L-225ENST00000589054 UGGT2Q9NYU1 1516 aa36.64■■■■□ 3.46
NEDD4L-225ENST00000589054 UACAQ9BZF9 1416 aa36.6■■■■□ 3.45
NEDD4L-225ENST00000589054 UHRF1BP1LA0JNW5 1464 aa36.6■■■■□ 3.45
NEDD4L-225ENST00000589054 ASXL2Q76L83 1435 aa36.58■■■■□ 3.45
NEDD4L-225ENST00000589054 KIAA0556O60303 1618 aa36.52■■■■□ 3.44
NEDD4L-225ENST00000589054 TSPOAP1O95153 1857 aa36.5■■■■□ 3.43
NEDD4L-225ENST00000589054 PRXQ9BXM0 1461 aa36.5■■■■□ 3.43
NEDD4L-225ENST00000589054 PLB1Q6P1J6 1458 aa36.48■■■■□ 3.43
NEDD4L-225ENST00000589054 KDM5BQ9UGL1 1544 aa36.46■■■■□ 3.43
NEDD4L-225ENST00000589054 KDM6BO15054 1643 aa36.41■■■■□ 3.42
NEDD4L-225ENST00000589054 GLI2P10070 1586 aa36.39■■■■□ 3.42
NEDD4L-225ENST00000589054 PPRC1Q5VV67 1664 aaKnown RBP36.35■■■■□ 3.41
NEDD4L-225ENST00000589054 CTTNBP2Q8WZ74 1663 aa36.35■■■■□ 3.41
NEDD4L-225ENST00000589054 EPRSP07814 1512 aaKnown RBP36.35■■■■□ 3.41
NEDD4L-225ENST00000589054 ZCCHC11Q5TAX3 1644 aaKnown RBP36.33■■■■□ 3.41
NEDD4L-225ENST00000589054 COL17A1Q9UMD9 1497 aaPredicted RBP36.26■■■■□ 3.4
NEDD4L-225ENST00000589054 KDM4FA0A1W2PPD8 638 aa36.26■■■■□ 3.4
NEDD4L-225ENST00000589054 GOLGA3Q08378 1498 aa36.25■■■■□ 3.39
NEDD4L-225ENST00000589054 CSRNP3Q8WYN3 585 aa36.24■■■■□ 3.39
NEDD4L-225ENST00000589054 ABCA8O94911 1581 aa36.23■■■■□ 3.39
NEDD4L-225ENST00000589054 P3H3Q8IVL6 736 aa36.19■■■■□ 3.38
NEDD4L-225ENST00000589054 MAP3K4Q9Y6R4 1608 aa36.19■■■■□ 3.38
NEDD4L-225ENST00000589054 WDR7Q9Y4E6 1490 aa36.18■■■■□ 3.38
NEDD4L-225ENST00000589054 KCNH8Q96L42 1107 aa36.09■■■■□ 3.37
NEDD4L-225ENST00000589054 ARID3CA6NKF2 412 aa36.07■■■■□ 3.36
NEDD4L-225ENST00000589054 TEX14Q8IWB6 1497 aa36.02■■■■□ 3.36
NEDD4L-225ENST00000589054 FAM9AQ8IZU1 332 aaPredicted RBP36■■■■□ 3.35
NEDD4L-225ENST00000589054 ATP10BO94823 1461 aa35.99■■■■□ 3.35
NEDD4L-225ENST00000589054 CD109Q6YHK3 1445 aa35.98■■■■□ 3.35
NEDD4L-225ENST00000589054 SAMD9Q5K651 1589 aa35.96■■■■□ 3.35
NEDD4L-225ENST00000589054 MAGI3Q5TCQ9 1506 aa35.93■■■■□ 3.34
NEDD4L-225ENST00000589054 EEA1Q15075 1411 aa35.92■■■■□ 3.34
NEDD4L-225ENST00000589054 RANGAP1P46060 587 aaPredicted RBP35.92■■■■□ 3.34
NEDD4L-225ENST00000589054 CFAP43Q8NDM7 1665 aa35.86■■■■□ 3.33
NEDD4L-225ENST00000589054 ADGRL1O94910 1474 aa35.84■■■■□ 3.33
NEDD4L-225ENST00000589054 FHOD3Q2V2M9 1422 aa35.82■■■■□ 3.32
NEDD4L-225ENST00000589054 RAPGEF6Q8TEU7 1601 aa35.78■■■■□ 3.32
NEDD4L-225ENST00000589054 NUP153P49790 1475 aaKnown RBP35.76■■■■□ 3.32
NEDD4L-225ENST00000589054 CHIC1Q5VXU3 224 aa35.71■■■■□ 3.31
NEDD4L-225ENST00000589054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.69■■■■□ 3.3
NEDD4L-225ENST00000589054 HNRNPUL2Q1KMD3 747 aaKnown RBP35.69■■■■□ 3.3
NEDD4L-225ENST00000589054 EHMT2Q96KQ7 1210 aa35.68■■■■□ 3.3
NEDD4L-225ENST00000589054 KIF21BO75037 1637 aa35.68■■■■□ 3.3
NEDD4L-225ENST00000589054 ABCA9Q8IUA7 1624 aa35.67■■■■□ 3.3
NEDD4L-225ENST00000589054 ARAP3Q8WWN8 1544 aa35.64■■■■□ 3.3
NEDD4L-225ENST00000589054 RAPGEF3O95398 923 aa35.56■■■■□ 3.28
NEDD4L-225ENST00000589054 EFCAB5A4FU69 1503 aa35.53■■■■□ 3.28
NEDD4L-225ENST00000589054 PLEKHD1A6NEE1 506 aa35.5■■■■□ 3.27
NEDD4L-225ENST00000589054 UBTFP17480 764 aaKnown RBP35.5■■■■□ 3.27
NEDD4L-225ENST00000589054 PHLDB1Q86UU1 1377 aa35.5■■■■□ 3.27
NEDD4L-225ENST00000589054 NEO1Q92859 1461 aa35.48■■■■□ 3.27
NEDD4L-225ENST00000589054 CDK13Q14004 1512 aaKnown RBP35.42■■■■□ 3.26
NEDD4L-225ENST00000589054 FRMPD1Q5SYB0 1578 aa35.41■■■■□ 3.26
NEDD4L-225ENST00000589054 ARHGAP35Q9NRY4 1499 aa35.4■■■■□ 3.26
NEDD4L-225ENST00000589054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.39■■■■□ 3.261e-6■■□□□ 11.6
NEDD4L-225ENST00000589054 TTC37Q6PGP7 1564 aa35.32■■■■□ 3.24
NEDD4L-225ENST00000589054 AKNAQ7Z591 1439 aa35.32■■■■□ 3.24
NEDD4L-225ENST00000589054 HECW2Q9P2P5 1572 aa35.31■■■■□ 3.24
NEDD4L-225ENST00000589054 ATP1B4Q9UN42 357 aaPredicted RBP35.29■■■■□ 3.24
NEDD4L-225ENST00000589054 FANCAO15360 1455 aa35.29■■■■□ 3.24
NEDD4L-225ENST00000589054 DENND4BO75064 1496 aaPredicted RBP35.25■■■■□ 3.23
NEDD4L-225ENST00000589054 FMN1Q68DA7 1419 aa35.24■■■■□ 3.23
NEDD4L-225ENST00000589054 ADAMTSL3P82987 1691 aa35.2■■■■□ 3.23
NEDD4L-225ENST00000589054 RICTORQ6R327 1708 aa35.19■■■■□ 3.22
NEDD4L-225ENST00000589054 PLCH2O75038 1416 aa35.17■■■■□ 3.22
NEDD4L-225ENST00000589054 PTPRMP28827 1452 aa35.16■■■■□ 3.22
NEDD4L-225ENST00000589054 HECW1Q76N89 1606 aa35.15■■■■□ 3.22
NEDD4L-225ENST00000589054 ARID4BQ4LE39 1312 aaPredicted RBP35.14■■■■□ 3.22
NEDD4L-225ENST00000589054 YEATS2Q9ULM3 1422 aa35.13■■■■□ 3.21
NEDD4L-225ENST00000589054 ARHGEF40Q8TER5 1519 aa35.11■■■■□ 3.21
NEDD4L-225ENST00000589054 BCORL1Q5H9F3 1711 aa35.1■■■■□ 3.21
NEDD4L-225ENST00000589054 CFAP74Q9C0B2 1584 aa35.09■■■■□ 3.21
NEDD4L-225ENST00000589054 SCAPERQ9BY12 1400 aa35.09■■■■□ 3.21
NEDD4L-225ENST00000589054 KIF14Q15058 1648 aa35.08■■■■□ 3.21
NEDD4L-225ENST00000589054 ZMYM4Q5VZL5 1548 aa35.06■■■■□ 3.2
NEDD4L-225ENST00000589054 ILDR1Q86SU0 546 aaPredicted RBP35.06■■■■□ 3.2
NEDD4L-225ENST00000589054 LRRIQ1Q96JM4 1722 aa35.06■■■■□ 3.2
NEDD4L-225ENST00000589054 MADDQ8WXG6 1647 aa35.05■■■■□ 3.2
NEDD4L-225ENST00000589054 TROQ12816 1431 aaPredicted RBP35.05■■■■□ 3.2
NEDD4L-225ENST00000589054 SIGLEC1Q9BZZ2 1709 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms