RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CTTNBP2Q8WZ74 1663 aa23.22■■□□□ 1.31
NPC1-207ENST00000588867 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
NPC1-207ENST00000588867 CEP170Q5SW79 1584 aa23.17■■□□□ 1.3
NPC1-207ENST00000588867 CLIP1P30622 1438 aa23.15■■□□□ 1.3
NPC1-207ENST00000588867 NUP160Q12769 1436 aa23.15■■□□□ 1.3
NPC1-207ENST00000588867 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
NPC1-207ENST00000588867 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
NPC1-207ENST00000588867 P3H3Q8IVL6 736 aa23.06■■□□□ 1.28
NPC1-207ENST00000588867 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
NPC1-207ENST00000588867 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
NPC1-207ENST00000588867 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
NPC1-207ENST00000588867 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
NPC1-207ENST00000588867 EFCAB5A4FU69 1503 aa22.97■■□□□ 1.27
NPC1-207ENST00000588867 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
NPC1-207ENST00000588867 SAMD9Q5K651 1589 aa22.94■■□□□ 1.26
NPC1-207ENST00000588867 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
NPC1-207ENST00000588867 FHOD3Q2V2M9 1422 aa22.93■■□□□ 1.26
NPC1-207ENST00000588867 DISP1Q96F81 1524 aa22.9■■□□□ 1.26
NPC1-207ENST00000588867 PRG4Q92954 1404 aaPredicted RBP22.89■■□□□ 1.26
NPC1-207ENST00000588867 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.25
NPC1-207ENST00000588867 CARMIL2Q6F5E8 1435 aa22.89■■□□□ 1.25
NPC1-207ENST00000588867 KIAA0556O60303 1618 aa22.87■■□□□ 1.25
NPC1-207ENST00000588867 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
NPC1-207ENST00000588867 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
NPC1-207ENST00000588867 FMN1Q68DA7 1419 aa22.79■■□□□ 1.24
NPC1-207ENST00000588867 ATP1B4Q9UN42 357 aaPredicted RBP22.79■■□□□ 1.24
NPC1-207ENST00000588867 ERCC6L2Q5T890 1561 aa22.78■■□□□ 1.24
NPC1-207ENST00000588867 APLP2Q06481 763 aa22.72■■□□□ 1.23
NPC1-207ENST00000588867 PTPRGP23470 1445 aa22.71■■□□□ 1.23
NPC1-207ENST00000588867 PCF11O94913 1555 aaKnown RBP22.7■■□□□ 1.22
NPC1-207ENST00000588867 CASKIN1Q8WXD9 1431 aa22.69■■□□□ 1.22
NPC1-207ENST00000588867 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
NPC1-207ENST00000588867 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
NPC1-207ENST00000588867 PLB1Q6P1J6 1458 aa22.64■■□□□ 1.22
NPC1-207ENST00000588867 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
NPC1-207ENST00000588867 RAPGEF6Q8TEU7 1601 aa22.62■■□□□ 1.21
NPC1-207ENST00000588867 HECW1Q76N89 1606 aa22.59■■□□□ 1.21
NPC1-207ENST00000588867 ARHGEF11O15085 1522 aa22.58■■□□□ 1.2
NPC1-207ENST00000588867 ABCA8O94911 1581 aa22.56■■□□□ 1.2
NPC1-207ENST00000588867 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
NPC1-207ENST00000588867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
NPC1-207ENST00000588867 HNRNPUL2Q1KMD3 747 aaKnown RBP22.55■■□□□ 1.2
NPC1-207ENST00000588867 NUP153P49790 1475 aaKnown RBP22.54■■□□□ 1.2
NPC1-207ENST00000588867 LRRIQ1Q96JM4 1722 aa22.54■■□□□ 1.2
NPC1-207ENST00000588867 TIAM1Q13009 1591 aa22.53■■□□□ 1.2
NPC1-207ENST00000588867 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
NPC1-207ENST00000588867 EPRSP07814 1512 aaKnown RBP22.53■■□□□ 1.2
NPC1-207ENST00000588867 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
NPC1-207ENST00000588867 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
NPC1-207ENST00000588867 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
NPC1-207ENST00000588867 MAP3K1Q13233 1512 aa22.5■■□□□ 1.19
NPC1-207ENST00000588867 CCDC18Q5T9S5 1454 aa22.5■■□□□ 1.19
NPC1-207ENST00000588867 CDK13Q14004 1512 aaKnown RBP22.49■■□□□ 1.19
NPC1-207ENST00000588867 CFAP43Q8NDM7 1665 aa22.48■■□□□ 1.19
NPC1-207ENST00000588867 ABCC2Q92887 1545 aa22.47■■□□□ 1.19
NPC1-207ENST00000588867 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
NPC1-207ENST00000588867 ATP10BO94823 1461 aa22.44■■□□□ 1.18
NPC1-207ENST00000588867 LRRC9Q6ZRR7 1453 aa22.44■■□□□ 1.18
NPC1-207ENST00000588867 UHRF1BP1LA0JNW5 1464 aa22.43■■□□□ 1.18
NPC1-207ENST00000588867 MTUS2Q5JR59 1369 aa22.43■■□□□ 1.18
NPC1-207ENST00000588867 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
NPC1-207ENST00000588867 ADCY10Q96PN6 1610 aa22.4■■□□□ 1.18
NPC1-207ENST00000588867 PLEKHD1A6NEE1 506 aa22.37■■□□□ 1.17
NPC1-207ENST00000588867 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
NPC1-207ENST00000588867 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
NPC1-207ENST00000588867 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
NPC1-207ENST00000588867 ZCCHC11Q5TAX3 1644 aaKnown RBP22.34■■□□□ 1.17
NPC1-207ENST00000588867 EHBP1L1Q8N3D4 1523 aa22.33■■□□□ 1.17
NPC1-207ENST00000588867 TROQ12816 1431 aaPredicted RBP22.29■■□□□ 1.16
NPC1-207ENST00000588867 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.16
NPC1-207ENST00000588867 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
NPC1-207ENST00000588867 DNAJC5Q9H3Z4 198 aa22.26■■□□□ 1.15
NPC1-207ENST00000588867 NCOA2Q15596 1464 aa22.25■■□□□ 1.15
NPC1-207ENST00000588867 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
NPC1-207ENST00000588867 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
NPC1-207ENST00000588867 KIF14Q15058 1648 aa22.2■■□□□ 1.14
NPC1-207ENST00000588867 ASXL2Q76L83 1435 aa22.19■■□□□ 1.14
NPC1-207ENST00000588867 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
NPC1-207ENST00000588867 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
NPC1-207ENST00000588867 CCNB3Q8WWL7 1395 aa22.16■■□□□ 1.14
NPC1-207ENST00000588867 MYOM3Q5VTT5 1437 aa22.13■■□□□ 1.13
NPC1-207ENST00000588867 ABCC10Q5T3U5 1492 aa22.1■■□□□ 1.13
NPC1-207ENST00000588867 RRBP1Q9P2E9 1410 aaKnown RBP22.09■■□□□ 1.13
NPC1-207ENST00000588867 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
NPC1-207ENST00000588867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.09■■□□□ 1.13
NPC1-207ENST00000588867 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.13
NPC1-207ENST00000588867 MAPKBP1O60336 1514 aa22.08■■□□□ 1.12
NPC1-207ENST00000588867 CFDP1Q9UEE9 299 aaPredicted RBP22.07■■□□□ 1.12
NPC1-207ENST00000588867 GPATCH8Q9UKJ3 1502 aaKnown RBP22.07■■□□□ 1.12
NPC1-207ENST00000588867 TTC37Q6PGP7 1564 aa22.06■■□□□ 1.12
NPC1-207ENST00000588867 ZNF777Q9ULD5 760 aaPredicted RBP22.04■■□□□ 1.12
NPC1-207ENST00000588867 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
NPC1-207ENST00000588867 CDC42BPAQ5VT25 1732 aa22.04■■□□□ 1.12
NPC1-207ENST00000588867 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
NPC1-207ENST00000588867 ITGAEP38570 1179 aa22.01■■□□□ 1.11
NPC1-207ENST00000588867 PTPN23Q9H3S7 1636 aa22.01■■□□□ 1.11
NPC1-207ENST00000588867 MYO5CQ9NQX4 1742 aa21.99■■□□□ 1.11
NPC1-207ENST00000588867 ZNF644Q9H582 1327 aaPredicted RBP21.99■■□□□ 1.11
NPC1-207ENST00000588867 ABCA9Q8IUA7 1624 aa21.98■■□□□ 1.11
NPC1-207ENST00000588867 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms