RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
CHUK-203ENST00000588656 KIF21AQ7Z4S6 1674 aa11.05□□□□□ -0.64
CHUK-203ENST00000588656 SMARCA2P51531 1590 aa11.04□□□□□ -0.64
CHUK-203ENST00000588656 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
CHUK-203ENST00000588656 GABBR2O75899 941 aa11.03□□□□□ -0.64
CHUK-203ENST00000588656 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
CHUK-203ENST00000588656 THOC2Q8NI27 1593 aaKnown RBP11.02□□□□□ -0.65
CHUK-203ENST00000588656 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
CHUK-203ENST00000588656 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
CHUK-203ENST00000588656 CLCN6P51797 869 aa10.99□□□□□ -0.65
CHUK-203ENST00000588656 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
CHUK-203ENST00000588656 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
CHUK-203ENST00000588656 LAMC3Q9Y6N6 1575 aa10.92□□□□□ -0.66
CHUK-203ENST00000588656 WIZO95785 1651 aa10.91□□□□□ -0.66
CHUK-203ENST00000588656 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.66
CHUK-203ENST00000588656 PROM2Q8N271 834 aa10.9□□□□□ -0.66
CHUK-203ENST00000588656 NPM1P06748 294 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHUK-203ENST00000588656 ZRANB1Q9UGI0 708 aa10.89□□□□□ -0.67
CHUK-203ENST00000588656 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
CHUK-203ENST00000588656 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
CHUK-203ENST00000588656 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
CHUK-203ENST00000588656 MNX1P50219 401 aaPredicted RBP10.82□□□□□ -0.68
CHUK-203ENST00000588656 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
CHUK-203ENST00000588656 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
CHUK-203ENST00000588656 MRC2Q9UBG0 1479 aa10.78□□□□□ -0.68
CHUK-203ENST00000588656 WDR62O43379 1518 aa10.77□□□□□ -0.69
CHUK-203ENST00000588656 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
CHUK-203ENST00000588656 CADPSQ9ULU8 1353 aa10.76□□□□□ -0.69
CHUK-203ENST00000588656 PLEKHG5O94827 1062 aa10.75□□□□□ -0.69
CHUK-203ENST00000588656 LHX8Q68G74 356 aa10.75□□□□□ -0.69
CHUK-203ENST00000588656 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
CHUK-203ENST00000588656 MIER1Q8N108 512 aa10.71□□□□□ -0.69
CHUK-203ENST00000588656 FANCD2Q9BXW9 1451 aa10.7□□□□□ -0.7
CHUK-203ENST00000588656 GALR2O43603 387 aaPredicted RBP10.69□□□□□ -0.7
CHUK-203ENST00000588656 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
CHUK-203ENST00000588656 PRDM2Q13029 1718 aa10.69□□□□□ -0.7
CHUK-203ENST00000588656 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
CHUK-203ENST00000588656 TOP2AP11388 1531 aaKnown RBP10.64□□□□□ -0.71
CHUK-203ENST00000588656 FKBP8Q14318 412 aa10.64□□□□□ -0.71
CHUK-203ENST00000588656 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
CHUK-203ENST00000588656 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
CHUK-203ENST00000588656 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
CHUK-203ENST00000588656 CFTRP13569 1480 aa10.61□□□□□ -0.71
CHUK-203ENST00000588656 RIMBP3CA6NJZ7 1639 aa10.6□□□□□ -0.71
CHUK-203ENST00000588656 RIMBP3BA6NNM3 1639 aa10.6□□□□□ -0.71
CHUK-203ENST00000588656 RIMBP3Q9UFD9 1639 aa10.6□□□□□ -0.71
CHUK-203ENST00000588656 ZBTB47Q9UFB7 747 aaPredicted RBP10.58□□□□□ -0.72
CHUK-203ENST00000588656 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
CHUK-203ENST00000588656 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
CHUK-203ENST00000588656 CHD1O14646 1710 aa10.56□□□□□ -0.72
CHUK-203ENST00000588656 MS4A3Q96HJ5 214 aa10.55□□□□□ -0.72
CHUK-203ENST00000588656 EIF4G3O43432 1585 aaKnown RBP10.53□□□□□ -0.72
CHUK-203ENST00000588656 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
CHUK-203ENST00000588656 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
CHUK-203ENST00000588656 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
CHUK-203ENST00000588656 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
CHUK-203ENST00000588656 TOPBP1Q92547 1522 aa10.5□□□□□ -0.73
CHUK-203ENST00000588656 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
CHUK-203ENST00000588656 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
CHUK-203ENST00000588656 ATMINO43313 823 aaPredicted RBP10.48□□□□□ -0.73
CHUK-203ENST00000588656 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
CHUK-203ENST00000588656 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
CHUK-203ENST00000588656 C7P10643 843 aa10.46□□□□□ -0.73
CHUK-203ENST00000588656 DNMBPQ6XZF7 1577 aa10.45□□□□□ -0.74
CHUK-203ENST00000588656 MAP3K13O43283 966 aa10.45□□□□□ -0.74
CHUK-203ENST00000588656 NUBP1P53384 320 aa10.45□□□□□ -0.74
CHUK-203ENST00000588656 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
CHUK-203ENST00000588656 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
CHUK-203ENST00000588656 AQRO60306 1485 aaKnown RBP eCLIP10.43□□□□□ -0.74
CHUK-203ENST00000588656 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
CHUK-203ENST00000588656 CYB5RLQ6IPT4 315 aa10.41□□□□□ -0.74
CHUK-203ENST00000588656 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
CHUK-203ENST00000588656 METRNQ9UJH8 293 aa10.41□□□□□ -0.74
CHUK-203ENST00000588656 POTEB2H3BUK9 544 aa10.4□□□□□ -0.74
CHUK-203ENST00000588656 TIE1P35590 1138 aa10.4□□□□□ -0.74
CHUK-203ENST00000588656 RAD54L2Q9Y4B4 1467 aa10.4□□□□□ -0.74
CHUK-203ENST00000588656 ATN1P54259 1190 aaPredicted RBP10.39□□□□□ -0.75
CHUK-203ENST00000588656 OTUD5Q96G74 571 aa10.39□□□□□ -0.75
CHUK-203ENST00000588656 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
CHUK-203ENST00000588656 ARAP1Q96P48 1450 aa10.38□□□□□ -0.75
CHUK-203ENST00000588656 BMP2KQ9NSY1 1161 aaPredicted RBP10.37□□□□□ -0.75
CHUK-203ENST00000588656 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
CHUK-203ENST00000588656 TRPC6Q9Y210 931 aa10.35□□□□□ -0.75
CHUK-203ENST00000588656 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
CHUK-203ENST00000588656 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
CHUK-203ENST00000588656 TDRD9Q8NDG6 1382 aaKnown RBP10.34□□□□□ -0.75
CHUK-203ENST00000588656 SNAPC4Q5SXM2 1469 aa10.34□□□□□ -0.75
CHUK-203ENST00000588656 DCAF8Q5TAQ9 597 aa10.33□□□□□ -0.76
CHUK-203ENST00000588656 MAMSTRQ6ZN01 415 aa10.33□□□□□ -0.76
CHUK-203ENST00000588656 FGD5Q6ZNL6 1462 aa10.32□□□□□ -0.76
CHUK-203ENST00000588656 WDR97A6NE52 1622 aa10.32□□□□□ -0.76
CHUK-203ENST00000588656 TTLL13PA6NNM8 815 aa10.31□□□□□ -0.76
CHUK-203ENST00000588656 CUX1P39880 1505 aa10.3□□□□□ -0.76
CHUK-203ENST00000588656 VASPP50552 380 aaPredicted RBP10.3□□□□□ -0.76
CHUK-203ENST00000588656 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
CHUK-203ENST00000588656 SOGA1O94964 1423 aa10.3□□□□□ -0.76
CHUK-203ENST00000588656 CLASP1Q7Z460 1538 aa10.29□□□□□ -0.76
CHUK-203ENST00000588656 IFNL1Q8IU54 200 aa10.28□□□□□ -0.76
CHUK-203ENST00000588656 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
CHUK-203ENST00000588656 SEC24BO95487 1268 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms