RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PRXQ9BXM0 1461 aa33.88■■■■□ 3.01
DDX39A-207ENST00000588542 KIAA0586Q9BVV6 1533 aa33.85■■■■□ 3.01
DDX39A-207ENST00000588542 ARAP1Q96P48 1450 aa33.83■■■■□ 3.01
DDX39A-207ENST00000588542 ERCC6L2Q5T890 1561 aa33.83■■■■□ 3.01
DDX39A-207ENST00000588542 CSRNP3Q8WYN3 585 aa33.83■■■■□ 3.01
DDX39A-207ENST00000588542 JPH4Q96JJ6 628 aa33.77■■■■□ 3
DDX39A-207ENST00000588542 FAM9AQ8IZU1 332 aaPredicted RBP33.74■■■□□ 2.99
DDX39A-207ENST00000588542 IQGAP2Q13576 1575 aa33.72■■■□□ 2.99
DDX39A-207ENST00000588542 PRG4Q92954 1404 aaPredicted RBP33.71■■■□□ 2.99
DDX39A-207ENST00000588542 CTTNBP2Q8WZ74 1663 aa33.71■■■□□ 2.99
DDX39A-207ENST00000588542 CYB5RLQ6IPT4 315 aa33.7■■■□□ 2.99
DDX39A-207ENST00000588542 KIF21BO75037 1637 aa33.61■■■□□ 2.97
DDX39A-207ENST00000588542 UGGT2Q9NYU1 1516 aa33.54■■■□□ 2.96
DDX39A-207ENST00000588542 DISP1Q96F81 1524 aa33.48■■■□□ 2.95
DDX39A-207ENST00000588542 CARMIL2Q6F5E8 1435 aa33.45■■■□□ 2.94
DDX39A-207ENST00000588542 KIAA0556O60303 1618 aa33.41■■■□□ 2.94
DDX39A-207ENST00000588542 GOLGA3Q08378 1498 aa33.36■■■□□ 2.93
DDX39A-207ENST00000588542 TNIKQ9UKE5 1360 aa33.35■■■□□ 2.93
DDX39A-207ENST00000588542 PTPRGP23470 1445 aa33.31■■■□□ 2.92
DDX39A-207ENST00000588542 EHMT2Q96KQ7 1210 aa33.29■■■□□ 2.92
DDX39A-207ENST00000588542 ADCY10Q96PN6 1610 aa33.26■■■□□ 2.91
DDX39A-207ENST00000588542 SAMD9Q5K651 1589 aa33.26■■■□□ 2.91
DDX39A-207ENST00000588542 TTBK1Q5TCY1 1321 aaPredicted RBP33.23■■■□□ 2.91
DDX39A-207ENST00000588542 UBTFP17480 764 aaKnown RBP33.21■■■□□ 2.91
DDX39A-207ENST00000588542 P3H3Q8IVL6 736 aa33.11■■■□□ 2.89
DDX39A-207ENST00000588542 UACAQ9BZF9 1416 aa33.11■■■□□ 2.89
DDX39A-207ENST00000588542 RANGAP1P46060 587 aaPredicted RBP33.1■■■□□ 2.89
DDX39A-207ENST00000588542 UHRF1BP1LA0JNW5 1464 aa33.1■■■□□ 2.89
DDX39A-207ENST00000588542 EFCAB5A4FU69 1503 aa33.07■■■□□ 2.89
DDX39A-207ENST00000588542 ABCC2Q92887 1545 aa33.07■■■□□ 2.89
DDX39A-207ENST00000588542 ABCA8O94911 1581 aa33.04■■■□□ 2.88
DDX39A-207ENST00000588542 PLB1Q6P1J6 1458 aa33.04■■■□□ 2.88
DDX39A-207ENST00000588542 FHOD3Q2V2M9 1422 aa33.01■■■□□ 2.87
DDX39A-207ENST00000588542 NPM1P06748 294 aaKnown RBP eCLIP32.99■■■□□ 2.87
DDX39A-207ENST00000588542 MAPKBP1O60336 1514 aa32.98■■■□□ 2.87
DDX39A-207ENST00000588542 ARHGAP35Q9NRY4 1499 aa32.95■■■□□ 2.87
DDX39A-207ENST00000588542 KDM5BQ9UGL1 1544 aa32.94■■■□□ 2.86
DDX39A-207ENST00000588542 ZCCHC11Q5TAX3 1644 aaKnown RBP32.93■■■□□ 2.86
DDX39A-207ENST00000588542 TRHP20396 242 aaPredicted RBP32.93■■■□□ 2.86
DDX39A-207ENST00000588542 RAPGEF6Q8TEU7 1601 aa32.89■■■□□ 2.86
DDX39A-207ENST00000588542 KIF13AQ9H1H9 1805 aa32.88■■■□□ 2.85
DDX39A-207ENST00000588542 ASXL2Q76L83 1435 aa32.8■■■□□ 2.84
DDX39A-207ENST00000588542 ABCC10Q5T3U5 1492 aa32.8■■■□□ 2.84
DDX39A-207ENST00000588542 DIP2BQ9P265 1576 aa32.79■■■□□ 2.84
DDX39A-207ENST00000588542 LOC105371045A0A1W2PR82 267 aa32.79■■■□□ 2.84
DDX39A-207ENST00000588542 CLIP1P30622 1438 aa32.76■■■□□ 2.83
DDX39A-207ENST00000588542 NUP153P49790 1475 aaKnown RBP32.75■■■□□ 2.83
DDX39A-207ENST00000588542 ATP10BO94823 1461 aa32.74■■■□□ 2.83
DDX39A-207ENST00000588542 FMN1Q68DA7 1419 aa32.73■■■□□ 2.83
DDX39A-207ENST00000588542 ARID3CA6NKF2 412 aa32.68■■■□□ 2.82
DDX39A-207ENST00000588542 FAM69CQ0P6D2 419 aa32.67■■■□□ 2.82
DDX39A-207ENST00000588542 CEP162Q5TB80 1403 aa32.66■■■□□ 2.82
DDX39A-207ENST00000588542 WDR7Q9Y4E6 1490 aa32.65■■■□□ 2.82
DDX39A-207ENST00000588542 GLI2P10070 1586 aa32.62■■■□□ 2.81
DDX39A-207ENST00000588542 EPRSP07814 1512 aaKnown RBP32.62■■■□□ 2.81
DDX39A-207ENST00000588542 HECW1Q76N89 1606 aa32.62■■■□□ 2.81
DDX39A-207ENST00000588542 LRRIQ1Q96JM4 1722 aa32.59■■■□□ 2.81
DDX39A-207ENST00000588542 PCF11O94913 1555 aaKnown RBP32.57■■■□□ 2.8
DDX39A-207ENST00000588542 TSPOAP1O95153 1857 aa32.56■■■□□ 2.8
DDX39A-207ENST00000588542 CDK13Q14004 1512 aaKnown RBP32.55■■■□□ 2.8
DDX39A-207ENST00000588542 CASKIN1Q8WXD9 1431 aa32.52■■■□□ 2.8
DDX39A-207ENST00000588542 MAP3K4Q9Y6R4 1608 aa32.51■■■□□ 2.8
DDX39A-207ENST00000588542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.51■■■□□ 2.79
DDX39A-207ENST00000588542 HNRNPUL2Q1KMD3 747 aaKnown RBP32.51■■■□□ 2.79
DDX39A-207ENST00000588542 ATP1B4Q9UN42 357 aaPredicted RBP32.49■■■□□ 2.79
DDX39A-207ENST00000588542 PPRC1Q5VV67 1664 aaKnown RBP32.49■■■□□ 2.79
DDX39A-207ENST00000588542 KCNH8Q96L42 1107 aa32.47■■■□□ 2.79
DDX39A-207ENST00000588542 FYCO1Q9BQS8 1478 aa32.46■■■□□ 2.79
DDX39A-207ENST00000588542 CFAP43Q8NDM7 1665 aa32.44■■■□□ 2.78
DDX39A-207ENST00000588542 PLEKHD1A6NEE1 506 aa32.39■■■□□ 2.78
DDX39A-207ENST00000588542 ABCA9Q8IUA7 1624 aa32.39■■■□□ 2.78
DDX39A-207ENST00000588542 CCDC18Q5T9S5 1454 aa32.36■■■□□ 2.77
DDX39A-207ENST00000588542 CD109Q6YHK3 1445 aa32.33■■■□□ 2.77
DDX39A-207ENST00000588542 MAGI3Q5TCQ9 1506 aa32.28■■■□□ 2.76
DDX39A-207ENST00000588542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.26■■■□□ 2.764e-7■■□□□ 11.9
DDX39A-207ENST00000588542 CDK11AQ9UQ88 783 aaPredicted RBP32.26■■■□□ 2.75
DDX39A-207ENST00000588542 VPS8Q8N3P4 1428 aa32.26■■■□□ 2.75
DDX39A-207ENST00000588542 TEX14Q8IWB6 1497 aa32.25■■■□□ 2.75
DDX39A-207ENST00000588542 TROQ12816 1431 aaPredicted RBP32.25■■■□□ 2.75
DDX39A-207ENST00000588542 TTC37Q6PGP7 1564 aa32.24■■■□□ 2.75
DDX39A-207ENST00000588542 KIF14Q15058 1648 aa32.23■■■□□ 2.75
DDX39A-207ENST00000588542 KDM6BO15054 1643 aa32.2■■■□□ 2.75
DDX39A-207ENST00000588542 MYO5CQ9NQX4 1742 aa32.11■■■□□ 2.73
DDX39A-207ENST00000588542 COL17A1Q9UMD9 1497 aaPredicted RBP32.1■■■□□ 2.73
DDX39A-207ENST00000588542 TIAM1Q13009 1591 aa32.07■■■□□ 2.72
DDX39A-207ENST00000588542 NEO1Q92859 1461 aa32.04■■■□□ 2.72
DDX39A-207ENST00000588542 PLCH2O75038 1416 aa32.03■■■□□ 2.72
DDX39A-207ENST00000588542 CFAP74Q9C0B2 1584 aa32.02■■■□□ 2.72
DDX39A-207ENST00000588542 EHBP1L1Q8N3D4 1523 aa32.01■■■□□ 2.72
DDX39A-207ENST00000588542 MTUS2Q5JR59 1369 aa32.01■■■□□ 2.71
DDX39A-207ENST00000588542 ARAP3Q8WWN8 1544 aa32■■■□□ 2.71
DDX39A-207ENST00000588542 CDC42BPBQ9Y5S2 1711 aa32■■■□□ 2.71
DDX39A-207ENST00000588542 FANCAO15360 1455 aa32■■■□□ 2.71
DDX39A-207ENST00000588542 CDC42BPAQ5VT25 1732 aa32■■■□□ 2.71
DDX39A-207ENST00000588542 PHLDB1Q86UU1 1377 aa31.99■■■□□ 2.71
DDX39A-207ENST00000588542 MAP3K1Q13233 1512 aa31.99■■■□□ 2.71
DDX39A-207ENST00000588542 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
DDX39A-207ENST00000588542 AKNAQ7Z591 1439 aa31.94■■■□□ 2.7
DDX39A-207ENST00000588542 LRRC9Q6ZRR7 1453 aa31.91■■■□□ 2.7
DDX39A-207ENST00000588542 ARHGAP5Q13017 1502 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms