RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ERCC6L2Q5T890 1561 aa21.41■■□□□ 1.02
NEDD4L-223ENST00000588516 CUX1P39880 1505 aa21.38■■□□□ 1.01
NEDD4L-223ENST00000588516 PBRM1Q86U86 1689 aa21.38■■□□□ 1.01
NEDD4L-223ENST00000588516 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
NEDD4L-223ENST00000588516 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
NEDD4L-223ENST00000588516 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
NEDD4L-223ENST00000588516 CCER1Q8TC90 406 aaPredicted RBP21.33■■□□□ 1.01
NEDD4L-223ENST00000588516 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
NEDD4L-223ENST00000588516 CEP170Q5SW79 1584 aa21.31■■□□□ 1
NEDD4L-223ENST00000588516 KDM4FA0A1W2PPD8 638 aa21.3■■□□□ 1
NEDD4L-223ENST00000588516 FAM69CQ0P6D2 419 aa21.3■■□□□ 1
NEDD4L-223ENST00000588516 GRIN2AQ12879 1464 aa21.29■■□□□ 1
NEDD4L-223ENST00000588516 SENP3Q9H4L4 574 aaPredicted RBP21.27■□□□□ 0.99
NEDD4L-223ENST00000588516 CLIP1P30622 1438 aa21.26■□□□□ 0.99
NEDD4L-223ENST00000588516 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
NEDD4L-223ENST00000588516 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
NEDD4L-223ENST00000588516 NUP160Q12769 1436 aa21.23■□□□□ 0.99
NEDD4L-223ENST00000588516 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
NEDD4L-223ENST00000588516 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
NEDD4L-223ENST00000588516 APLP2Q06481 763 aa21.21■□□□□ 0.99
NEDD4L-223ENST00000588516 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
NEDD4L-223ENST00000588516 ABCC10Q5T3U5 1492 aa21.18■□□□□ 0.98
NEDD4L-223ENST00000588516 SHROOM2Q13796 1616 aa21.16■□□□□ 0.98
NEDD4L-223ENST00000588516 PRG4Q92954 1404 aaPredicted RBP21.15■□□□□ 0.98
NEDD4L-223ENST00000588516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
NEDD4L-223ENST00000588516 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
NEDD4L-223ENST00000588516 KDM6BO15054 1643 aa21.13■□□□□ 0.97
NEDD4L-223ENST00000588516 JPH4Q96JJ6 628 aa21.11■□□□□ 0.97
NEDD4L-223ENST00000588516 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
NEDD4L-223ENST00000588516 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
NEDD4L-223ENST00000588516 KIF27Q86VH2 1401 aa21.09■□□□□ 0.97
NEDD4L-223ENST00000588516 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
NEDD4L-223ENST00000588516 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
NEDD4L-223ENST00000588516 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
NEDD4L-223ENST00000588516 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
NEDD4L-223ENST00000588516 ADCY10Q96PN6 1610 aa20.94■□□□□ 0.94
NEDD4L-223ENST00000588516 TTBK1Q5TCY1 1321 aaPredicted RBP20.94■□□□□ 0.94
NEDD4L-223ENST00000588516 ADGRL1O94910 1474 aa20.92■□□□□ 0.94
NEDD4L-223ENST00000588516 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
NEDD4L-223ENST00000588516 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
NEDD4L-223ENST00000588516 DIEXFQ68CQ4 756 aaKnown RBP20.87■□□□□ 0.93
NEDD4L-223ENST00000588516 HECW2Q9P2P5 1572 aa20.86■□□□□ 0.93
NEDD4L-223ENST00000588516 ZNF316A6NFI3 1004 aaPredicted RBP20.83■□□□□ 0.93
NEDD4L-223ENST00000588516 CENPBP07199 599 aaPredicted RBP20.8■□□□□ 0.92
NEDD4L-223ENST00000588516 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
NEDD4L-223ENST00000588516 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
NEDD4L-223ENST00000588516 FBXO41Q8TF61 875 aa20.75■□□□□ 0.91
NEDD4L-223ENST00000588516 PTPRGP23470 1445 aa20.74■□□□□ 0.91
NEDD4L-223ENST00000588516 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
NEDD4L-223ENST00000588516 IGF1RP08069 1367 aa20.72■□□□□ 0.91
NEDD4L-223ENST00000588516 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
NEDD4L-223ENST00000588516 RRBP1Q9P2E9 1410 aaKnown RBP20.72■□□□□ 0.91
NEDD4L-223ENST00000588516 ASXL2Q76L83 1435 aa20.71■□□□□ 0.91
NEDD4L-223ENST00000588516 PLB1Q6P1J6 1458 aa20.7■□□□□ 0.9
NEDD4L-223ENST00000588516 ARHGAP35Q9NRY4 1499 aa20.69■□□□□ 0.9
NEDD4L-223ENST00000588516 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
NEDD4L-223ENST00000588516 PPRC1Q5VV67 1664 aaKnown RBP20.68■□□□□ 0.9
NEDD4L-223ENST00000588516 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
NEDD4L-223ENST00000588516 COL17A1Q9UMD9 1497 aaPredicted RBP20.68■□□□□ 0.9
NEDD4L-223ENST00000588516 GLI2P10070 1586 aa20.67■□□□□ 0.9
NEDD4L-223ENST00000588516 ABCC2Q92887 1545 aa20.67■□□□□ 0.9
NEDD4L-223ENST00000588516 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-223ENST00000588516 TEX14Q8IWB6 1497 aa20.6■□□□□ 0.89
NEDD4L-223ENST00000588516 CARMIL2Q6F5E8 1435 aa20.59■□□□□ 0.89
NEDD4L-223ENST00000588516 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
NEDD4L-223ENST00000588516 CUL7Q14999 1698 aa20.59■□□□□ 0.89
NEDD4L-223ENST00000588516 TIAM1Q13009 1591 aa20.57■□□□□ 0.88
NEDD4L-223ENST00000588516 EFCAB5A4FU69 1503 aa20.56■□□□□ 0.88
NEDD4L-223ENST00000588516 EPRSP07814 1512 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-223ENST00000588516 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-223ENST00000588516 KANK4Q5T7N3 995 aaPredicted RBP20.54■□□□□ 0.88
NEDD4L-223ENST00000588516 UACAQ9BZF9 1416 aa20.53■□□□□ 0.88
NEDD4L-223ENST00000588516 DHX57Q6P158 1386 aaKnown RBP20.53■□□□□ 0.88
NEDD4L-223ENST00000588516 UHRF1BP1LA0JNW5 1464 aa20.52■□□□□ 0.88
NEDD4L-223ENST00000588516 MAP3K4Q9Y6R4 1608 aa20.51■□□□□ 0.87
NEDD4L-223ENST00000588516 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
NEDD4L-223ENST00000588516 LRRC9Q6ZRR7 1453 aa20.46■□□□□ 0.87
NEDD4L-223ENST00000588516 FYCO1Q9BQS8 1478 aa20.45■□□□□ 0.86
NEDD4L-223ENST00000588516 CTTNBP2Q8WZ74 1663 aa20.44■□□□□ 0.86
NEDD4L-223ENST00000588516 KDM5BQ9UGL1 1544 aa20.44■□□□□ 0.86
NEDD4L-223ENST00000588516 LMTK3Q96Q04 1460 aa20.42■□□□□ 0.86
NEDD4L-223ENST00000588516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.86
NEDD4L-223ENST00000588516 NEUROD1Q13562 356 aa20.41■□□□□ 0.86
NEDD4L-223ENST00000588516 FMN1Q68DA7 1419 aa20.4■□□□□ 0.86
NEDD4L-223ENST00000588516 CASKIN1Q8WXD9 1431 aa20.4■□□□□ 0.86
NEDD4L-223ENST00000588516 IQGAP2Q13576 1575 aa20.39■□□□□ 0.86
NEDD4L-223ENST00000588516 ZCCHC11Q5TAX3 1644 aaKnown RBP20.39■□□□□ 0.85
NEDD4L-223ENST00000588516 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
NEDD4L-223ENST00000588516 CD109Q6YHK3 1445 aa20.37■□□□□ 0.85
NEDD4L-223ENST00000588516 WDR7Q9Y4E6 1490 aa20.36■□□□□ 0.85
NEDD4L-223ENST00000588516 SETD5Q9C0A6 1442 aa20.36■□□□□ 0.85
NEDD4L-223ENST00000588516 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
NEDD4L-223ENST00000588516 DISP1Q96F81 1524 aa20.35■□□□□ 0.85
NEDD4L-223ENST00000588516 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
NEDD4L-223ENST00000588516 MAGI3Q5TCQ9 1506 aa20.31■□□□□ 0.84
NEDD4L-223ENST00000588516 PTPRMP28827 1452 aa20.3■□□□□ 0.84
NEDD4L-223ENST00000588516 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
NEDD4L-223ENST00000588516 MIER1Q8N108 512 aa20.27■□□□□ 0.84
NEDD4L-223ENST00000588516 GTF3C3Q9Y5Q9 886 aa20.27■□□□□ 0.84
NEDD4L-223ENST00000588516 SAMD9Q5K651 1589 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms