RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 JPH4Q96JJ6 628 aa27.11■■□□□ 1.93
RETREG3-206ENST00000588423 RAPGEF2Q9Y4G8 1499 aa27.11■■□□□ 1.93
RETREG3-206ENST00000588423 ERCC6L2Q5T890 1561 aa27.08■■□□□ 1.93
RETREG3-206ENST00000588423 PRG4Q92954 1404 aaPredicted RBP27.06■■□□□ 1.92
RETREG3-206ENST00000588423 EEA1Q15075 1411 aa27.01■■□□□ 1.91
RETREG3-206ENST00000588423 PRXQ9BXM0 1461 aa27■■□□□ 1.91
RETREG3-206ENST00000588423 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
RETREG3-206ENST00000588423 IQGAP2Q13576 1575 aa26.95■■□□□ 1.9
RETREG3-206ENST00000588423 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
RETREG3-206ENST00000588423 CARMIL2Q6F5E8 1435 aa26.84■■□□□ 1.89
RETREG3-206ENST00000588423 UGGT2Q9NYU1 1516 aa26.83■■□□□ 1.89
RETREG3-206ENST00000588423 CTTNBP2Q8WZ74 1663 aa26.82■■□□□ 1.88
RETREG3-206ENST00000588423 DISP1Q96F81 1524 aa26.77■■□□□ 1.88
RETREG3-206ENST00000588423 TNIKQ9UKE5 1360 aa26.76■■□□□ 1.87
RETREG3-206ENST00000588423 PTPRGP23470 1445 aa26.73■■□□□ 1.87
RETREG3-206ENST00000588423 FAM9AQ8IZU1 332 aaPredicted RBP26.72■■□□□ 1.87
RETREG3-206ENST00000588423 KIAA0556O60303 1618 aa26.69■■□□□ 1.86
RETREG3-206ENST00000588423 KIF21BO75037 1637 aa26.69■■□□□ 1.86
RETREG3-206ENST00000588423 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
RETREG3-206ENST00000588423 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
RETREG3-206ENST00000588423 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
RETREG3-206ENST00000588423 NPM1P06748 294 aaKnown RBP eCLIP26.59■■□□□ 1.85
RETREG3-206ENST00000588423 UHRF1BP1LA0JNW5 1464 aa26.58■■□□□ 1.85
RETREG3-206ENST00000588423 UACAQ9BZF9 1416 aa26.57■■□□□ 1.84
RETREG3-206ENST00000588423 TTBK1Q5TCY1 1321 aaPredicted RBP26.56■■□□□ 1.84
RETREG3-206ENST00000588423 MAPKBP1O60336 1514 aa26.55■■□□□ 1.84
RETREG3-206ENST00000588423 ABCC2Q92887 1545 aa26.52■■□□□ 1.84
RETREG3-206ENST00000588423 SAMD9Q5K651 1589 aa26.5■■□□□ 1.83
RETREG3-206ENST00000588423 KDM5BQ9UGL1 1544 aa26.44■■□□□ 1.82
RETREG3-206ENST00000588423 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
RETREG3-206ENST00000588423 ABCA8O94911 1581 aa26.42■■□□□ 1.82
RETREG3-206ENST00000588423 PLB1Q6P1J6 1458 aa26.42■■□□□ 1.82
RETREG3-206ENST00000588423 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
RETREG3-206ENST00000588423 EFCAB5A4FU69 1503 aa26.39■■□□□ 1.82
RETREG3-206ENST00000588423 P3H3Q8IVL6 736 aa26.39■■□□□ 1.82
RETREG3-206ENST00000588423 KIF13AQ9H1H9 1805 aa26.37■■□□□ 1.81
RETREG3-206ENST00000588423 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
RETREG3-206ENST00000588423 ASXL2Q76L83 1435 aa26.34■■□□□ 1.81
RETREG3-206ENST00000588423 ZCCHC11Q5TAX3 1644 aaKnown RBP26.34■■□□□ 1.81
RETREG3-206ENST00000588423 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
RETREG3-206ENST00000588423 RANGAP1P46060 587 aaPredicted RBP26.32■■□□□ 1.8
RETREG3-206ENST00000588423 FAM69CQ0P6D2 419 aa26.32■■□□□ 1.8
RETREG3-206ENST00000588423 FHOD3Q2V2M9 1422 aa26.31■■□□□ 1.8
RETREG3-206ENST00000588423 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
RETREG3-206ENST00000588423 GLI2P10070 1586 aa26.24■■□□□ 1.79
RETREG3-206ENST00000588423 ARHGAP35Q9NRY4 1499 aa26.22■■□□□ 1.79
RETREG3-206ENST00000588423 WDR7Q9Y4E6 1490 aa26.21■■□□□ 1.79
RETREG3-206ENST00000588423 EPRSP07814 1512 aaKnown RBP26.2■■□□□ 1.79
RETREG3-206ENST00000588423 ATP10BO94823 1461 aa26.19■■□□□ 1.78
RETREG3-206ENST00000588423 NUP153P49790 1475 aaKnown RBP26.16■■□□□ 1.78
RETREG3-206ENST00000588423 FMN1Q68DA7 1419 aa26.15■■□□□ 1.78
RETREG3-206ENST00000588423 MAP3K4Q9Y6R4 1608 aa26.08■■□□□ 1.77
RETREG3-206ENST00000588423 ARID3CA6NKF2 412 aa26.08■■□□□ 1.77
RETREG3-206ENST00000588423 TSPOAP1O95153 1857 aa26.03■■□□□ 1.76
RETREG3-206ENST00000588423 CLIP1P30622 1438 aa26.03■■□□□ 1.76
RETREG3-206ENST00000588423 PPRC1Q5VV67 1664 aaKnown RBP26.03■■□□□ 1.76
RETREG3-206ENST00000588423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
RETREG3-206ENST00000588423 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
RETREG3-206ENST00000588423 HECW1Q76N89 1606 aa26.01■■□□□ 1.75
RETREG3-206ENST00000588423 KCNH8Q96L42 1107 aa26.01■■□□□ 1.75
RETREG3-206ENST00000588423 CFAP43Q8NDM7 1665 aa26■■□□□ 1.75
RETREG3-206ENST00000588423 TEX14Q8IWB6 1497 aa25.99■■□□□ 1.75
RETREG3-206ENST00000588423 CD109Q6YHK3 1445 aa25.97■■□□□ 1.75
RETREG3-206ENST00000588423 PLEKHD1A6NEE1 506 aa25.96■■□□□ 1.75
RETREG3-206ENST00000588423 MAGI3Q5TCQ9 1506 aa25.96■■□□□ 1.75
RETREG3-206ENST00000588423 KDM6BO15054 1643 aa25.94■■□□□ 1.74
RETREG3-206ENST00000588423 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
RETREG3-206ENST00000588423 ABCA9Q8IUA7 1624 aa25.93■■□□□ 1.74
RETREG3-206ENST00000588423 CASKIN1Q8WXD9 1431 aa25.92■■□□□ 1.74
RETREG3-206ENST00000588423 ATP1B4Q9UN42 357 aaPredicted RBP25.9■■□□□ 1.74
RETREG3-206ENST00000588423 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
RETREG3-206ENST00000588423 PCF11O94913 1555 aaKnown RBP25.87■■□□□ 1.73
RETREG3-206ENST00000588423 FYCO1Q9BQS8 1478 aa25.86■■□□□ 1.73
RETREG3-206ENST00000588423 CDK11AQ9UQ88 783 aaPredicted RBP25.86■■□□□ 1.73
RETREG3-206ENST00000588423 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
RETREG3-206ENST00000588423 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
RETREG3-206ENST00000588423 LRRIQ1Q96JM4 1722 aa25.81■■□□□ 1.72
RETREG3-206ENST00000588423 COL17A1Q9UMD9 1497 aaPredicted RBP25.79■■□□□ 1.72
RETREG3-206ENST00000588423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.79■■□□□ 1.726e-6■■■■■ 38.2
RETREG3-206ENST00000588423 PHLDB1Q86UU1 1377 aa25.79■■□□□ 1.72
RETREG3-206ENST00000588423 TROQ12816 1431 aaPredicted RBP25.77■■□□□ 1.72
RETREG3-206ENST00000588423 NEO1Q92859 1461 aa25.75■■□□□ 1.71
RETREG3-206ENST00000588423 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
RETREG3-206ENST00000588423 ARAP3Q8WWN8 1544 aa25.73■■□□□ 1.71
RETREG3-206ENST00000588423 KIF14Q15058 1648 aa25.7■■□□□ 1.71
RETREG3-206ENST00000588423 PLCH2O75038 1416 aa25.67■■□□□ 1.7
RETREG3-206ENST00000588423 CFAP74Q9C0B2 1584 aa25.67■■□□□ 1.7
RETREG3-206ENST00000588423 FANCAO15360 1455 aa25.65■■□□□ 1.7
RETREG3-206ENST00000588423 AKNAQ7Z591 1439 aa25.62■■□□□ 1.69
RETREG3-206ENST00000588423 VPS8Q8N3P4 1428 aa25.61■■□□□ 1.69
RETREG3-206ENST00000588423 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
RETREG3-206ENST00000588423 EFCAB2Q5VUJ9 269 aa25.55■■□□□ 1.68
RETREG3-206ENST00000588423 DENND4BO75064 1496 aaPredicted RBP25.54■■□□□ 1.68
RETREG3-206ENST00000588423 MTUS2Q5JR59 1369 aa25.53■■□□□ 1.68
RETREG3-206ENST00000588423 FRMPD1Q5SYB0 1578 aa25.52■■□□□ 1.68
RETREG3-206ENST00000588423 RAPGEF3O95398 923 aa25.52■■□□□ 1.68
RETREG3-206ENST00000588423 ADGRL1O94910 1474 aa25.5■■□□□ 1.67
RETREG3-206ENST00000588423 ARHGAP5Q13017 1502 aa25.5■■□□□ 1.67
RETREG3-206ENST00000588423 PREX2Q70Z35 1606 aa25.5■■□□□ 1.67
RETREG3-206ENST00000588423 EHBP1L1Q8N3D4 1523 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms