RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 CUL7Q14999 1698 aa29.5■■■□□ 2.31
TMED1-203ENST00000588259 IGF1RP08069 1367 aa29.45■■■□□ 2.31
TMED1-203ENST00000588259 KIAA0586Q9BVV6 1533 aa29.37■■■□□ 2.29
TMED1-203ENST00000588259 CARMIL1Q5VZK9 1371 aa29.3■■■□□ 2.28
TMED1-203ENST00000588259 KIF13AQ9H1H9 1805 aa29.29■■■□□ 2.28
TMED1-203ENST00000588259 NPM1P06748 294 aaKnown RBP eCLIP29.27■■■□□ 2.28
TMED1-203ENST00000588259 ADCY10Q96PN6 1610 aa29.25■■■□□ 2.27
TMED1-203ENST00000588259 TTBK1Q5TCY1 1321 aaPredicted RBP29.2■■■□□ 2.26
TMED1-203ENST00000588259 IQGAP2Q13576 1575 aa29.17■■■□□ 2.26
TMED1-203ENST00000588259 MAPKBP1O60336 1514 aa29.16■■■□□ 2.26
TMED1-203ENST00000588259 FAM69CQ0P6D2 419 aa29.14■■■□□ 2.26
TMED1-203ENST00000588259 CARMIL2Q6F5E8 1435 aa29.13■■■□□ 2.25
TMED1-203ENST00000588259 AEBP2Q6ZN18 517 aaPredicted RBP29.13■■■□□ 2.25
TMED1-203ENST00000588259 PTPRGP23470 1445 aa29.12■■■□□ 2.25
TMED1-203ENST00000588259 ABCC10Q5T3U5 1492 aa29.12■■■□□ 2.25
TMED1-203ENST00000588259 DIP2BQ9P265 1576 aa29.09■■■□□ 2.25
TMED1-203ENST00000588259 RAPGEF2Q9Y4G8 1499 aa29.05■■■□□ 2.24
TMED1-203ENST00000588259 TNIKQ9UKE5 1360 aa29.05■■■□□ 2.24
TMED1-203ENST00000588259 TSPOAP1O95153 1857 aa29■■■□□ 2.23
TMED1-203ENST00000588259 ABCC2Q92887 1545 aa28.95■■■□□ 2.23
TMED1-203ENST00000588259 DISP1Q96F81 1524 aa28.95■■■□□ 2.23
TMED1-203ENST00000588259 UGGT2Q9NYU1 1516 aa28.92■■■□□ 2.22
TMED1-203ENST00000588259 CTTNBP2Q8WZ74 1663 aa28.89■■■□□ 2.22
TMED1-203ENST00000588259 UACAQ9BZF9 1416 aa28.88■■■□□ 2.21
TMED1-203ENST00000588259 KIAA0556O60303 1618 aa28.88■■■□□ 2.21
TMED1-203ENST00000588259 KDM6BO15054 1643 aa28.87■■■□□ 2.21
TMED1-203ENST00000588259 ASXL2Q76L83 1435 aa28.86■■■□□ 2.21
TMED1-203ENST00000588259 UHRF1BP1LA0JNW5 1464 aa28.86■■■□□ 2.21
TMED1-203ENST00000588259 PLB1Q6P1J6 1458 aa28.83■■■□□ 2.21
TMED1-203ENST00000588259 ZCCHC11Q5TAX3 1644 aaKnown RBP28.76■■■□□ 2.2
TMED1-203ENST00000588259 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
TMED1-203ENST00000588259 GOLGA3Q08378 1498 aa28.73■■■□□ 2.19
TMED1-203ENST00000588259 GLI2P10070 1586 aa28.73■■■□□ 2.19
TMED1-203ENST00000588259 PRXQ9BXM0 1461 aa28.72■■■□□ 2.19
TMED1-203ENST00000588259 PPRC1Q5VV67 1664 aaKnown RBP28.68■■■□□ 2.18
TMED1-203ENST00000588259 EPRSP07814 1512 aaKnown RBP28.66■■■□□ 2.18
TMED1-203ENST00000588259 MAP3K4Q9Y6R4 1608 aa28.62■■■□□ 2.17
TMED1-203ENST00000588259 WDR7Q9Y4E6 1490 aa28.59■■■□□ 2.17
TMED1-203ENST00000588259 ABCA8O94911 1581 aa28.58■■■□□ 2.17
TMED1-203ENST00000588259 TEX14Q8IWB6 1497 aa28.56■■■□□ 2.16
TMED1-203ENST00000588259 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
TMED1-203ENST00000588259 P3H3Q8IVL6 736 aa28.53■■■□□ 2.16
TMED1-203ENST00000588259 FAM9AQ8IZU1 332 aaPredicted RBP28.53■■■□□ 2.16
TMED1-203ENST00000588259 ARID3CA6NKF2 412 aa28.48■■■□□ 2.15
TMED1-203ENST00000588259 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
TMED1-203ENST00000588259 KDM4FA0A1W2PPD8 638 aa28.45■■■□□ 2.14
TMED1-203ENST00000588259 COL17A1Q9UMD9 1497 aaPredicted RBP28.44■■■□□ 2.14
TMED1-203ENST00000588259 EEA1Q15075 1411 aa28.43■■■□□ 2.14
TMED1-203ENST00000588259 CFAP43Q8NDM7 1665 aa28.43■■■□□ 2.14
TMED1-203ENST00000588259 RANGAP1P46060 587 aaPredicted RBP28.41■■■□□ 2.14
TMED1-203ENST00000588259 CD109Q6YHK3 1445 aa28.41■■■□□ 2.14
TMED1-203ENST00000588259 SAMD9Q5K651 1589 aa28.41■■■□□ 2.14
TMED1-203ENST00000588259 MAGI3Q5TCQ9 1506 aa28.34■■■□□ 2.13
TMED1-203ENST00000588259 RAPGEF6Q8TEU7 1601 aa28.34■■■□□ 2.13
TMED1-203ENST00000588259 ADGRL1O94910 1474 aa28.34■■■□□ 2.13
TMED1-203ENST00000588259 ATP10BO94823 1461 aa28.33■■■□□ 2.13
TMED1-203ENST00000588259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.29■■■□□ 2.12
TMED1-203ENST00000588259 HNRNPUL2Q1KMD3 747 aaKnown RBP28.29■■■□□ 2.12
TMED1-203ENST00000588259 FHOD3Q2V2M9 1422 aa28.26■■■□□ 2.12
TMED1-203ENST00000588259 KIF21BO75037 1637 aa28.25■■■□□ 2.11
TMED1-203ENST00000588259 ABCA9Q8IUA7 1624 aa28.21■■■□□ 2.11
TMED1-203ENST00000588259 EHMT2Q96KQ7 1210 aa28.19■■■□□ 2.1
TMED1-203ENST00000588259 NUP153P49790 1475 aaKnown RBP28.19■■■□□ 2.1
TMED1-203ENST00000588259 EFCAB5A4FU69 1503 aa28.16■■■□□ 2.1
TMED1-203ENST00000588259 ARAP3Q8WWN8 1544 aa28.12■■■□□ 2.09
TMED1-203ENST00000588259 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
TMED1-203ENST00000588259 PLEKHD1A6NEE1 506 aa28.05■■■□□ 2.08
TMED1-203ENST00000588259 PHLDB1Q86UU1 1377 aa28.05■■■□□ 2.08
TMED1-203ENST00000588259 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
TMED1-203ENST00000588259 NEO1Q92859 1461 aa28.03■■■□□ 2.08
TMED1-203ENST00000588259 RAPGEF3O95398 923 aa28■■■□□ 2.07
TMED1-203ENST00000588259 CDK13Q14004 1512 aaKnown RBP27.97■■■□□ 2.07
TMED1-203ENST00000588259 ATP1B4Q9UN42 357 aaPredicted RBP27.96■■■□□ 2.07
TMED1-203ENST00000588259 FRMPD1Q5SYB0 1578 aa27.94■■■□□ 2.06
TMED1-203ENST00000588259 TTC37Q6PGP7 1564 aa27.94■■■□□ 2.06
TMED1-203ENST00000588259 HECW2Q9P2P5 1572 aa27.94■■■□□ 2.06
TMED1-203ENST00000588259 CFAP74Q9C0B2 1584 aa27.93■■■□□ 2.06
TMED1-203ENST00000588259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.92■■■□□ 2.06
TMED1-203ENST00000588259 HECW1Q76N89 1606 aa27.91■■■□□ 2.06
TMED1-203ENST00000588259 FANCAO15360 1455 aa27.9■■■□□ 2.06
TMED1-203ENST00000588259 FMN1Q68DA7 1419 aa27.9■■■□□ 2.06
TMED1-203ENST00000588259 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.05
TMED1-203ENST00000588259 DENND4BO75064 1496 aaPredicted RBP27.87■■■□□ 2.05
TMED1-203ENST00000588259 AKNAQ7Z591 1439 aa27.86■■■□□ 2.05
TMED1-203ENST00000588259 ARID4BQ4LE39 1312 aaPredicted RBP27.86■■■□□ 2.05
TMED1-203ENST00000588259 RICTORQ6R327 1708 aa27.85■■■□□ 2.05
TMED1-203ENST00000588259 ARHGEF40Q8TER5 1519 aa27.82■■■□□ 2.04
TMED1-203ENST00000588259 ADAMTSL3P82987 1691 aa27.8■■■□□ 2.04
TMED1-203ENST00000588259 BCORL1Q5H9F3 1711 aa27.78■■■□□ 2.04
TMED1-203ENST00000588259 CDK11AQ9UQ88 783 aaPredicted RBP27.77■■■□□ 2.04
TMED1-203ENST00000588259 MYO5CQ9NQX4 1742 aa27.76■■■□□ 2.03
TMED1-203ENST00000588259 PTPRMP28827 1452 aa27.75■■■□□ 2.03
TMED1-203ENST00000588259 KIF14Q15058 1648 aa27.74■■■□□ 2.03
TMED1-203ENST00000588259 MADDQ8WXG6 1647 aa27.74■■■□□ 2.03
TMED1-203ENST00000588259 ZMYM4Q5VZL5 1548 aa27.72■■■□□ 2.03
TMED1-203ENST00000588259 ZFYVE16Q7Z3T8 1539 aa27.72■■■□□ 2.03
TMED1-203ENST00000588259 PLCH2O75038 1416 aa27.72■■■□□ 2.03
TMED1-203ENST00000588259 LRRIQ1Q96JM4 1722 aa27.7■■■□□ 2.03
TMED1-203ENST00000588259 CLIP1P30622 1438 aa27.69■■■□□ 2.02
TMED1-203ENST00000588259 SCAPERQ9BY12 1400 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms