RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, humanhuman

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-213ENST00000588237 JPH4Q96JJ6 628 aa22.64■■□□□ 1.21
GRN-213ENST00000588237 PRG4Q92954 1404 aaPredicted RBP22.63■■□□□ 1.21
GRN-213ENST00000588237 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
GRN-213ENST00000588237 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
GRN-213ENST00000588237 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
GRN-213ENST00000588237 NPM1P06748 294 aaKnown RBP eCLIP22.56■■□□□ 1.2
GRN-213ENST00000588237 KIAA0586Q9BVV6 1533 aa22.54■■□□□ 1.2
GRN-213ENST00000588237 FAM69CQ0P6D2 419 aa22.51■■□□□ 1.19
GRN-213ENST00000588237 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
GRN-213ENST00000588237 ABCC10Q5T3U5 1492 aa22.44■■□□□ 1.18
GRN-213ENST00000588237 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
GRN-213ENST00000588237 IQGAP2Q13576 1575 aa22.41■■□□□ 1.18
GRN-213ENST00000588237 MAPKBP1O60336 1514 aa22.4■■□□□ 1.18
GRN-213ENST00000588237 ADCY10Q96PN6 1610 aa22.37■■□□□ 1.17
GRN-213ENST00000588237 CARMIL2Q6F5E8 1435 aa22.37■■□□□ 1.17
GRN-213ENST00000588237 DIP2BQ9P265 1576 aa22.35■■□□□ 1.17
GRN-213ENST00000588237 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
GRN-213ENST00000588237 PTPRGP23470 1445 aa22.31■■□□□ 1.16
GRN-213ENST00000588237 CTTNBP2Q8WZ74 1663 aa22.3■■□□□ 1.16
GRN-213ENST00000588237 TNIKQ9UKE5 1360 aa22.28■■□□□ 1.16
GRN-213ENST00000588237 KDM6BO15054 1643 aa22.27■■□□□ 1.16
GRN-213ENST00000588237 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
GRN-213ENST00000588237 UGGT2Q9NYU1 1516 aa22.23■■□□□ 1.15
GRN-213ENST00000588237 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
GRN-213ENST00000588237 DISP1Q96F81 1524 aa22.22■■□□□ 1.15
GRN-213ENST00000588237 KDM4FA0A1W2PPD8 638 aa22.21■■□□□ 1.15
GRN-213ENST00000588237 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
GRN-213ENST00000588237 KIAA0556O60303 1618 aa22.18■■□□□ 1.14
GRN-213ENST00000588237 EEA1Q15075 1411 aa22.16■■□□□ 1.14
GRN-213ENST00000588237 ABCC2Q92887 1545 aa22.14■■□□□ 1.13
GRN-213ENST00000588237 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
GRN-213ENST00000588237 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
GRN-213ENST00000588237 PLB1Q6P1J6 1458 aa22.11■■□□□ 1.13
GRN-213ENST00000588237 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
GRN-213ENST00000588237 ASXL2Q76L83 1435 aa22.11■■□□□ 1.13
GRN-213ENST00000588237 UHRF1BP1LA0JNW5 1464 aa22.09■■□□□ 1.13
GRN-213ENST00000588237 GLI2P10070 1586 aa22.06■■□□□ 1.12
GRN-213ENST00000588237 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
GRN-213ENST00000588237 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
GRN-213ENST00000588237 PPRC1Q5VV67 1664 aaKnown RBP22.02■■□□□ 1.12
GRN-213ENST00000588237 ZCCHC11Q5TAX3 1644 aaKnown RBP22■■□□□ 1.11
GRN-213ENST00000588237 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
GRN-213ENST00000588237 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
GRN-213ENST00000588237 KIF21BO75037 1637 aa21.96■■□□□ 1.11
GRN-213ENST00000588237 EPRSP07814 1512 aaKnown RBP21.96■■□□□ 1.11
GRN-213ENST00000588237 ABCA8O94911 1581 aa21.94■■□□□ 1.1
GRN-213ENST00000588237 TEX14Q8IWB6 1497 aa21.93■■□□□ 1.1
GRN-213ENST00000588237 MAP3K4Q9Y6R4 1608 aa21.92■■□□□ 1.1
GRN-213ENST00000588237 ADGRL1O94910 1474 aa21.92■■□□□ 1.1
GRN-213ENST00000588237 COL17A1Q9UMD9 1497 aaPredicted RBP21.92■■□□□ 1.1
GRN-213ENST00000588237 SAMD9Q5K651 1589 aa21.91■■□□□ 1.1
GRN-213ENST00000588237 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
GRN-213ENST00000588237 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
GRN-213ENST00000588237 ILDR1Q86SU0 546 aaPredicted RBP21.86■■□□□ 1.09
GRN-213ENST00000588237 WDR7Q9Y4E6 1490 aa21.85■■□□□ 1.09
GRN-213ENST00000588237 KCNH8Q96L42 1107 aa21.85■■□□□ 1.09
GRN-213ENST00000588237 FHOD3Q2V2M9 1422 aa21.83■■□□□ 1.09
GRN-213ENST00000588237 RAPGEF6Q8TEU7 1601 aa21.82■■□□□ 1.08
GRN-213ENST00000588237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
GRN-213ENST00000588237 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
GRN-213ENST00000588237 EFCAB5A4FU69 1503 aa21.78■■□□□ 1.08
GRN-213ENST00000588237 ATP10BO94823 1461 aa21.77■■□□□ 1.08
GRN-213ENST00000588237 CD109Q6YHK3 1445 aa21.77■■□□□ 1.08
GRN-213ENST00000588237 CFAP43Q8NDM7 1665 aa21.74■■□□□ 1.07
GRN-213ENST00000588237 MAGI3Q5TCQ9 1506 aa21.73■■□□□ 1.07
GRN-213ENST00000588237 HECW2Q9P2P5 1572 aa21.72■■□□□ 1.07
GRN-213ENST00000588237 NUP153P49790 1475 aaKnown RBP21.7■■□□□ 1.06
GRN-213ENST00000588237 ATP1B4Q9UN42 357 aaPredicted RBP21.68■■□□□ 1.06
GRN-213ENST00000588237 ARHGAP35Q9NRY4 1499 aa21.63■■□□□ 1.05
GRN-213ENST00000588237 PLEKHD1A6NEE1 506 aa21.62■■□□□ 1.05
GRN-213ENST00000588237 FMN1Q68DA7 1419 aa21.61■■□□□ 1.05
GRN-213ENST00000588237 ABCA9Q8IUA7 1624 aa21.59■■□□□ 1.05
GRN-213ENST00000588237 ARAP3Q8WWN8 1544 aa21.58■■□□□ 1.04
GRN-213ENST00000588237 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
GRN-213ENST00000588237 HECW1Q76N89 1606 aa21.55■■□□□ 1.04
GRN-213ENST00000588237 PHLDB1Q86UU1 1377 aa21.54■■□□□ 1.04
GRN-213ENST00000588237 RAPGEF3O95398 923 aa21.49■■□□□ 1.03
GRN-213ENST00000588237 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
GRN-213ENST00000588237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.45■■□□□ 1.021e-6■■■■□ 23.9
GRN-213ENST00000588237 CLIP1P30622 1438 aa21.45■■□□□ 1.02
GRN-213ENST00000588237 NEO1Q92859 1461 aa21.44■■□□□ 1.02
GRN-213ENST00000588237 PTPRMP28827 1452 aa21.43■■□□□ 1.02
GRN-213ENST00000588237 TTC37Q6PGP7 1564 aa21.43■■□□□ 1.02
GRN-213ENST00000588237 ADAMTSL3P82987 1691 aa21.43■■□□□ 1.02
GRN-213ENST00000588237 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
GRN-213ENST00000588237 LRRIQ1Q96JM4 1722 aa21.42■■□□□ 1.02
GRN-213ENST00000588237 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
GRN-213ENST00000588237 CFAP74Q9C0B2 1584 aa21.39■■□□□ 1.01
GRN-213ENST00000588237 FANCAO15360 1455 aa21.39■■□□□ 1.01
GRN-213ENST00000588237 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
GRN-213ENST00000588237 FBXO41Q8TF61 875 aa21.38■■□□□ 1.01
GRN-213ENST00000588237 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
GRN-213ENST00000588237 KIF14Q15058 1648 aa21.36■■□□□ 1.01
GRN-213ENST00000588237 BCORL1Q5H9F3 1711 aa21.35■■□□□ 1.01
GRN-213ENST00000588237 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
GRN-213ENST00000588237 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
GRN-213ENST00000588237 MYO5CQ9NQX4 1742 aa21.35■■□□□ 1.01
GRN-213ENST00000588237 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
GRN-213ENST00000588237 FYCO1Q9BQS8 1478 aa21.32■■□□□ 1
GRN-213ENST00000588237 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms