RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 PRG4Q92954 1404 aaPredicted RBP23.36■■□□□ 1.33
PKN1-211ENST00000588200 CUL7Q14999 1698 aa23.35■■□□□ 1.33
PKN1-211ENST00000588200 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
PKN1-211ENST00000588200 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
PKN1-211ENST00000588200 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
PKN1-211ENST00000588200 MAPKBP1O60336 1514 aa23.13■■□□□ 1.29
PKN1-211ENST00000588200 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
PKN1-211ENST00000588200 NPM1P06748 294 aaKnown RBP eCLIP23.08■■□□□ 1.29
PKN1-211ENST00000588200 ABCC10Q5T3U5 1492 aa23.08■■□□□ 1.29
PKN1-211ENST00000588200 IQGAP2Q13576 1575 aa23.05■■□□□ 1.28
PKN1-211ENST00000588200 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
PKN1-211ENST00000588200 PTPRGP23470 1445 aa23.02■■□□□ 1.28
PKN1-211ENST00000588200 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
PKN1-211ENST00000588200 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
PKN1-211ENST00000588200 DIP2BQ9P265 1576 aa23■■□□□ 1.27
PKN1-211ENST00000588200 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
PKN1-211ENST00000588200 DISP1Q96F81 1524 aa22.95■■□□□ 1.26
PKN1-211ENST00000588200 UGGT2Q9NYU1 1516 aa22.95■■□□□ 1.26
PKN1-211ENST00000588200 UHRF1BP1LA0JNW5 1464 aa22.94■■□□□ 1.26
PKN1-211ENST00000588200 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
PKN1-211ENST00000588200 UACAQ9BZF9 1416 aa22.87■■□□□ 1.25
PKN1-211ENST00000588200 PLB1Q6P1J6 1458 aa22.85■■□□□ 1.25
PKN1-211ENST00000588200 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
PKN1-211ENST00000588200 KIAA0556O60303 1618 aa22.83■■□□□ 1.25
PKN1-211ENST00000588200 KDM5BQ9UGL1 1544 aa22.82■■□□□ 1.24
PKN1-211ENST00000588200 GLI2P10070 1586 aa22.82■■□□□ 1.24
PKN1-211ENST00000588200 CTTNBP2Q8WZ74 1663 aa22.81■■□□□ 1.24
PKN1-211ENST00000588200 ASXL2Q76L83 1435 aa22.8■■□□□ 1.24
PKN1-211ENST00000588200 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
PKN1-211ENST00000588200 GOLGA3Q08378 1498 aa22.76■■□□□ 1.23
PKN1-211ENST00000588200 KDM6BO15054 1643 aa22.74■■□□□ 1.23
PKN1-211ENST00000588200 TSPOAP1O95153 1857 aa22.73■■□□□ 1.23
PKN1-211ENST00000588200 TTBK1Q5TCY1 1321 aaPredicted RBP22.73■■□□□ 1.23
PKN1-211ENST00000588200 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
PKN1-211ENST00000588200 PPRC1Q5VV67 1664 aaKnown RBP22.7■■□□□ 1.22
PKN1-211ENST00000588200 EPRSP07814 1512 aaKnown RBP22.69■■□□□ 1.22
PKN1-211ENST00000588200 MAP3K4Q9Y6R4 1608 aa22.65■■□□□ 1.22
PKN1-211ENST00000588200 ABCA8O94911 1581 aa22.65■■□□□ 1.22
PKN1-211ENST00000588200 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
PKN1-211ENST00000588200 EEA1Q15075 1411 aa22.62■■□□□ 1.21
PKN1-211ENST00000588200 WDR7Q9Y4E6 1490 aa22.61■■□□□ 1.21
PKN1-211ENST00000588200 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
PKN1-211ENST00000588200 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
PKN1-211ENST00000588200 COL17A1Q9UMD9 1497 aaPredicted RBP22.52■■□□□ 1.2
PKN1-211ENST00000588200 FAM9AQ8IZU1 332 aaPredicted RBP22.51■■□□□ 1.19
PKN1-211ENST00000588200 CFAP43Q8NDM7 1665 aa22.51■■□□□ 1.19
PKN1-211ENST00000588200 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
PKN1-211ENST00000588200 KDM4FA0A1W2PPD8 638 aa22.49■■□□□ 1.19
PKN1-211ENST00000588200 CD109Q6YHK3 1445 aa22.45■■□□□ 1.18
PKN1-211ENST00000588200 ATP10BO94823 1461 aa22.45■■□□□ 1.18
PKN1-211ENST00000588200 KIF21BO75037 1637 aa22.39■■□□□ 1.17
PKN1-211ENST00000588200 RAPGEF6Q8TEU7 1601 aa22.39■■□□□ 1.17
PKN1-211ENST00000588200 P3H3Q8IVL6 736 aa22.38■■□□□ 1.17
PKN1-211ENST00000588200 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
PKN1-211ENST00000588200 PHLDB1Q86UU1 1377 aa22.36■■□□□ 1.17
PKN1-211ENST00000588200 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
PKN1-211ENST00000588200 ARAP3Q8WWN8 1544 aa22.33■■□□□ 1.17
PKN1-211ENST00000588200 EFCAB5A4FU69 1503 aa22.32■■□□□ 1.16
PKN1-211ENST00000588200 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
PKN1-211ENST00000588200 ADGRL1O94910 1474 aa22.3■■□□□ 1.16
PKN1-211ENST00000588200 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
PKN1-211ENST00000588200 NEO1Q92859 1461 aa22.25■■□□□ 1.15
PKN1-211ENST00000588200 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
PKN1-211ENST00000588200 ARID3CA6NKF2 412 aa22.21■■□□□ 1.15
PKN1-211ENST00000588200 PLEKHD1A6NEE1 506 aa22.18■■□□□ 1.14
PKN1-211ENST00000588200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
PKN1-211ENST00000588200 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
PKN1-211ENST00000588200 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
PKN1-211ENST00000588200 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
PKN1-211ENST00000588200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.13
PKN1-211ENST00000588200 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
PKN1-211ENST00000588200 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
PKN1-211ENST00000588200 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.12
PKN1-211ENST00000588200 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.12
PKN1-211ENST00000588200 RAPGEF3O95398 923 aa22.07■■□□□ 1.12
PKN1-211ENST00000588200 AKNAQ7Z591 1439 aa22.04■■□□□ 1.12
PKN1-211ENST00000588200 FANCAO15360 1455 aa22.03■■□□□ 1.12
PKN1-211ENST00000588200 RICTORQ6R327 1708 aa22.03■■□□□ 1.12
PKN1-211ENST00000588200 HECW1Q76N89 1606 aa22.03■■□□□ 1.12
PKN1-211ENST00000588200 TTC37Q6PGP7 1564 aa22.03■■□□□ 1.12
PKN1-211ENST00000588200 DENND4BO75064 1496 aaPredicted RBP22.03■■□□□ 1.12
PKN1-211ENST00000588200 CDK13Q14004 1512 aaKnown RBP22.02■■□□□ 1.12
PKN1-211ENST00000588200 ADAMTSL3P82987 1691 aa22.01■■□□□ 1.11
PKN1-211ENST00000588200 PLCH2O75038 1416 aa21.99■■□□□ 1.11
PKN1-211ENST00000588200 ZMYM4Q5VZL5 1548 aa21.99■■□□□ 1.11
PKN1-211ENST00000588200 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
PKN1-211ENST00000588200 HECW2Q9P2P5 1572 aa21.97■■□□□ 1.11
PKN1-211ENST00000588200 MAGI2Q86UL8 1455 aa21.96■■□□□ 1.11
PKN1-211ENST00000588200 ARHGEF40Q8TER5 1519 aa21.96■■□□□ 1.11
PKN1-211ENST00000588200 BCORL1Q5H9F3 1711 aa21.95■■□□□ 1.1
PKN1-211ENST00000588200 PTPRMP28827 1452 aa21.92■■□□□ 1.1
PKN1-211ENST00000588200 TROQ12816 1431 aaPredicted RBP21.91■■□□□ 1.1
PKN1-211ENST00000588200 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
PKN1-211ENST00000588200 LRRIQ1Q96JM4 1722 aa21.89■■□□□ 1.09
PKN1-211ENST00000588200 EFCAB2Q5VUJ9 269 aa21.88■■□□□ 1.09
PKN1-211ENST00000588200 POGZQ7Z3K3 1410 aa21.88■■□□□ 1.09
PKN1-211ENST00000588200 CASKIN1Q8WXD9 1431 aa21.88■■□□□ 1.09
PKN1-211ENST00000588200 SCAPERQ9BY12 1400 aa21.88■■□□□ 1.09
PKN1-211ENST00000588200 KIF14Q15058 1648 aa21.88■■□□□ 1.09
PKN1-211ENST00000588200 EHMT2Q96KQ7 1210 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms