RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 CUL7Q14999 1698 aa29.71■■■□□ 2.35
SF3A2-203ENST00000587637 IGF1RP08069 1367 aa29.66■■■□□ 2.34
SF3A2-203ENST00000587637 KIF27Q86VH2 1401 aa29.65■■■□□ 2.34
SF3A2-203ENST00000587637 ADCY10Q96PN6 1610 aa29.65■■■□□ 2.34
SF3A2-203ENST00000587637 KIAA0586Q9BVV6 1533 aa29.59■■■□□ 2.33
SF3A2-203ENST00000587637 DIP2BQ9P265 1576 aa29.51■■■□□ 2.31
SF3A2-203ENST00000587637 MAPKBP1O60336 1514 aa29.5■■■□□ 2.31
SF3A2-203ENST00000587637 ABCC10Q5T3U5 1492 aa29.47■■■□□ 2.31
SF3A2-203ENST00000587637 CARMIL1Q5VZK9 1371 aa29.46■■■□□ 2.31
SF3A2-203ENST00000587637 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
SF3A2-203ENST00000587637 IQGAP2Q13576 1575 aa29.39■■■□□ 2.3
SF3A2-203ENST00000587637 FAM69CQ0P6D2 419 aa29.39■■■□□ 2.3
SF3A2-203ENST00000587637 AEBP2Q6ZN18 517 aaPredicted RBP29.39■■■□□ 2.3
SF3A2-203ENST00000587637 TSPOAP1O95153 1857 aa29.38■■■□□ 2.29
SF3A2-203ENST00000587637 NPM1P06748 294 aaKnown RBP eCLIP29.33■■■□□ 2.29
SF3A2-203ENST00000587637 PTPRGP23470 1445 aa29.31■■■□□ 2.28
SF3A2-203ENST00000587637 DISP1Q96F81 1524 aa29.27■■■□□ 2.28
SF3A2-203ENST00000587637 TNIKQ9UKE5 1360 aa29.26■■■□□ 2.27
SF3A2-203ENST00000587637 KDM6BO15054 1643 aa29.24■■■□□ 2.27
SF3A2-203ENST00000587637 CARMIL2Q6F5E8 1435 aa29.23■■■□□ 2.27
SF3A2-203ENST00000587637 ABCC2Q92887 1545 aa29.23■■■□□ 2.27
SF3A2-203ENST00000587637 RAPGEF2Q9Y4G8 1499 aa29.22■■■□□ 2.27
SF3A2-203ENST00000587637 KIAA0556O60303 1618 aa29.19■■■□□ 2.26
SF3A2-203ENST00000587637 PPRC1Q5VV67 1664 aaKnown RBP29.18■■■□□ 2.26
SF3A2-203ENST00000587637 UGGT2Q9NYU1 1516 aa29.17■■■□□ 2.26
SF3A2-203ENST00000587637 ASXL2Q76L83 1435 aa29.15■■■□□ 2.26
SF3A2-203ENST00000587637 CTTNBP2Q8WZ74 1663 aa29.15■■■□□ 2.26
SF3A2-203ENST00000587637 UHRF1BP1LA0JNW5 1464 aa29.12■■■□□ 2.25
SF3A2-203ENST00000587637 UACAQ9BZF9 1416 aa29.11■■■□□ 2.25
SF3A2-203ENST00000587637 ZCCHC11Q5TAX3 1644 aaKnown RBP29.1■■■□□ 2.25
SF3A2-203ENST00000587637 GLI2P10070 1586 aa29.05■■■□□ 2.24
SF3A2-203ENST00000587637 PLB1Q6P1J6 1458 aa29.04■■■□□ 2.24
SF3A2-203ENST00000587637 KDM5BQ9UGL1 1544 aa29.03■■■□□ 2.24
SF3A2-203ENST00000587637 MAP3K4Q9Y6R4 1608 aa28.99■■■□□ 2.23
SF3A2-203ENST00000587637 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
SF3A2-203ENST00000587637 PRXQ9BXM0 1461 aa28.93■■■□□ 2.22
SF3A2-203ENST00000587637 KDM4FA0A1W2PPD8 638 aa28.9■■■□□ 2.22
SF3A2-203ENST00000587637 ABCA8O94911 1581 aa28.89■■■□□ 2.22
SF3A2-203ENST00000587637 COL17A1Q9UMD9 1497 aaPredicted RBP28.89■■■□□ 2.22
SF3A2-203ENST00000587637 WDR7Q9Y4E6 1490 aa28.85■■■□□ 2.21
SF3A2-203ENST00000587637 GOLGA3Q08378 1498 aa28.83■■■□□ 2.21
SF3A2-203ENST00000587637 TEX14Q8IWB6 1497 aa28.75■■■□□ 2.19
SF3A2-203ENST00000587637 ADGRL1O94910 1474 aa28.74■■■□□ 2.19
SF3A2-203ENST00000587637 ARID3CA6NKF2 412 aa28.72■■■□□ 2.19
SF3A2-203ENST00000587637 CFAP43Q8NDM7 1665 aa28.71■■■□□ 2.19
SF3A2-203ENST00000587637 P3H3Q8IVL6 736 aa28.69■■■□□ 2.18
SF3A2-203ENST00000587637 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
SF3A2-203ENST00000587637 KCNH8Q96L42 1107 aa28.64■■■□□ 2.18
SF3A2-203ENST00000587637 CD109Q6YHK3 1445 aa28.62■■■□□ 2.17
SF3A2-203ENST00000587637 MAGI3Q5TCQ9 1506 aa28.62■■■□□ 2.17
SF3A2-203ENST00000587637 ATP10BO94823 1461 aa28.59■■■□□ 2.17
SF3A2-203ENST00000587637 RAPGEF6Q8TEU7 1601 aa28.58■■■□□ 2.17
SF3A2-203ENST00000587637 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
SF3A2-203ENST00000587637 KIF21BO75037 1637 aa28.54■■■□□ 2.16
SF3A2-203ENST00000587637 RANGAP1P46060 587 aaPredicted RBP28.51■■■□□ 2.15
SF3A2-203ENST00000587637 FHOD3Q2V2M9 1422 aa28.51■■■□□ 2.15
SF3A2-203ENST00000587637 ABCA9Q8IUA7 1624 aa28.5■■■□□ 2.15
SF3A2-203ENST00000587637 FAM9AQ8IZU1 332 aaPredicted RBP28.47■■■□□ 2.15
SF3A2-203ENST00000587637 NUP153P49790 1475 aaKnown RBP28.46■■■□□ 2.15
SF3A2-203ENST00000587637 EEA1Q15075 1411 aa28.43■■■□□ 2.14
SF3A2-203ENST00000587637 HECW2Q9P2P5 1572 aa28.41■■■□□ 2.14
SF3A2-203ENST00000587637 ARAP3Q8WWN8 1544 aa28.38■■■□□ 2.13
SF3A2-203ENST00000587637 FRMPD1Q5SYB0 1578 aa28.37■■■□□ 2.13
SF3A2-203ENST00000587637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
SF3A2-203ENST00000587637 HNRNPUL2Q1KMD3 747 aaKnown RBP28.32■■■□□ 2.12
SF3A2-203ENST00000587637 EHMT2Q96KQ7 1210 aa28.3■■■□□ 2.12
SF3A2-203ENST00000587637 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
SF3A2-203ENST00000587637 TTC37Q6PGP7 1564 aa28.27■■■□□ 2.12
SF3A2-203ENST00000587637 CDK13Q14004 1512 aaKnown RBP28.26■■■□□ 2.11
SF3A2-203ENST00000587637 RAPGEF3O95398 923 aa28.25■■■□□ 2.11
SF3A2-203ENST00000587637 NEO1Q92859 1461 aa28.25■■■□□ 2.11
SF3A2-203ENST00000587637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.22■■■□□ 2.11
SF3A2-203ENST00000587637 ADAMTSL3P82987 1691 aa28.2■■■□□ 2.11
SF3A2-203ENST00000587637 RICTORQ6R327 1708 aa28.2■■■□□ 2.1
SF3A2-203ENST00000587637 ARHGEF40Q8TER5 1519 aa28.18■■■□□ 2.1
SF3A2-203ENST00000587637 BCORL1Q5H9F3 1711 aa28.15■■■□□ 2.1
SF3A2-203ENST00000587637 MADDQ8WXG6 1647 aa28.14■■■□□ 2.1
SF3A2-203ENST00000587637 PHLDB1Q86UU1 1377 aa28.14■■■□□ 2.1
SF3A2-203ENST00000587637 SIGLEC1Q9BZZ2 1709 aa28.12■■■□□ 2.09
SF3A2-203ENST00000587637 CFAP74Q9C0B2 1584 aa28.11■■■□□ 2.09
SF3A2-203ENST00000587637 FANCAO15360 1455 aa28.11■■■□□ 2.09
SF3A2-203ENST00000587637 ARHGAP35Q9NRY4 1499 aa28.1■■■□□ 2.09
SF3A2-203ENST00000587637 ILDR1Q86SU0 546 aaPredicted RBP28.09■■■□□ 2.09
SF3A2-203ENST00000587637 AKNAQ7Z591 1439 aa28.09■■■□□ 2.09
SF3A2-203ENST00000587637 PTPRMP28827 1452 aa28.08■■■□□ 2.09
SF3A2-203ENST00000587637 PLEKHD1A6NEE1 506 aa28.08■■■□□ 2.09
SF3A2-203ENST00000587637 DENND4BO75064 1496 aaPredicted RBP28.08■■■□□ 2.09
SF3A2-203ENST00000587637 HECW1Q76N89 1606 aa28.07■■■□□ 2.08
SF3A2-203ENST00000587637 LRRIQ1Q96JM4 1722 aa28.07■■■□□ 2.08
SF3A2-203ENST00000587637 KIF14Q15058 1648 aa28.05■■■□□ 2.08
SF3A2-203ENST00000587637 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
SF3A2-203ENST00000587637 RIMS1Q86UR5 1692 aaKnown RBP28.05■■■□□ 2.08
SF3A2-203ENST00000587637 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
SF3A2-203ENST00000587637 ZMYM4Q5VZL5 1548 aa28.02■■■□□ 2.08
SF3A2-203ENST00000587637 YEATS2Q9ULM3 1422 aa28.01■■■□□ 2.07
SF3A2-203ENST00000587637 ARID4BQ4LE39 1312 aaPredicted RBP27.99■■■□□ 2.07
SF3A2-203ENST00000587637 ZFYVE16Q7Z3T8 1539 aa27.99■■■□□ 2.07
SF3A2-203ENST00000587637 MYO5CQ9NQX4 1742 aa27.99■■■□□ 2.07
SF3A2-203ENST00000587637 ATP1B4Q9UN42 357 aaPredicted RBP27.97■■■□□ 2.07
SF3A2-203ENST00000587637 FMN1Q68DA7 1419 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms