RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
SDF2-205ENST00000587629 ADAMTS12P58397 1594 aa11.36□□□□□ -0.59
SDF2-205ENST00000587629 CEP170Q5SW79 1584 aa11.36□□□□□ -0.59
SDF2-205ENST00000587629 FHAD1B1AJZ9 1412 aa11.35□□□□□ -0.59
SDF2-205ENST00000587629 NUP160Q12769 1436 aa11.35□□□□□ -0.59
SDF2-205ENST00000587629 ERICH3Q5RHP9 1530 aa11.31□□□□□ -0.6
SDF2-205ENST00000587629 PRG4Q92954 1404 aaPredicted RBP11.29□□□□□ -0.6
SDF2-205ENST00000587629 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
SDF2-205ENST00000587629 SHROOM2Q13796 1616 aa11.27□□□□□ -0.61
SDF2-205ENST00000587629 IGF1RP08069 1367 aa11.22□□□□□ -0.61
SDF2-205ENST00000587629 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
SDF2-205ENST00000587629 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
SDF2-205ENST00000587629 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
SDF2-205ENST00000587629 KIF27Q86VH2 1401 aa11.19□□□□□ -0.62
SDF2-205ENST00000587629 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
SDF2-205ENST00000587629 KIAA0586Q9BVV6 1533 aa11.16□□□□□ -0.62
SDF2-205ENST00000587629 CACNB1Q02641 598 aaPredicted RBP11.16□□□□□ -0.62
SDF2-205ENST00000587629 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
SDF2-205ENST00000587629 KIF13AQ9H1H9 1805 aa11.14□□□□□ -0.63
SDF2-205ENST00000587629 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
SDF2-205ENST00000587629 CUL7Q14999 1698 aa11.13□□□□□ -0.63
SDF2-205ENST00000587629 ADCY10Q96PN6 1610 aa11.13□□□□□ -0.63
SDF2-205ENST00000587629 ABCC10Q5T3U5 1492 aa11.12□□□□□ -0.63
SDF2-205ENST00000587629 PTPRGP23470 1445 aa11.1□□□□□ -0.63
SDF2-205ENST00000587629 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
SDF2-205ENST00000587629 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
SDF2-205ENST00000587629 DMRT2Q9Y5R5 561 aa11.07□□□□□ -0.64
SDF2-205ENST00000587629 CARMIL2Q6F5E8 1435 aa11.07□□□□□ -0.64
SDF2-205ENST00000587629 TNIKQ9UKE5 1360 aa11.06□□□□□ -0.64
SDF2-205ENST00000587629 IQGAP2Q13576 1575 aa11.04□□□□□ -0.64
SDF2-205ENST00000587629 TSPOAP1O95153 1857 aa11.04□□□□□ -0.64
SDF2-205ENST00000587629 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
SDF2-205ENST00000587629 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
SDF2-205ENST00000587629 ABCC2Q92887 1545 aa11.01□□□□□ -0.65
SDF2-205ENST00000587629 DISP1Q96F81 1524 aa11.01□□□□□ -0.65
SDF2-205ENST00000587629 KDM6BO15054 1643 aa11.01□□□□□ -0.65
SDF2-205ENST00000587629 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
SDF2-205ENST00000587629 KDM4FA0A1W2PPD8 638 aa10.98□□□□□ -0.65
SDF2-205ENST00000587629 PLB1Q6P1J6 1458 aa10.98□□□□□ -0.65
SDF2-205ENST00000587629 UHRF1BP1LA0JNW5 1464 aa10.97□□□□□ -0.65
SDF2-205ENST00000587629 UGGT2Q9NYU1 1516 aa10.96□□□□□ -0.65
SDF2-205ENST00000587629 KIAA0556O60303 1618 aa10.94□□□□□ -0.66
SDF2-205ENST00000587629 GLI2P10070 1586 aa10.93□□□□□ -0.66
SDF2-205ENST00000587629 EPRSP07814 1512 aaKnown RBP10.93□□□□□ -0.66
SDF2-205ENST00000587629 KDM5BQ9UGL1 1544 aa10.93□□□□□ -0.66
SDF2-205ENST00000587629 KCNH8Q96L42 1107 aa10.92□□□□□ -0.66
SDF2-205ENST00000587629 PPRC1Q5VV67 1664 aaKnown RBP10.92□□□□□ -0.66
SDF2-205ENST00000587629 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
SDF2-205ENST00000587629 ARID3CA6NKF2 412 aa10.91□□□□□ -0.66
SDF2-205ENST00000587629 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
SDF2-205ENST00000587629 COL17A1Q9UMD9 1497 aaPredicted RBP10.9□□□□□ -0.66
SDF2-205ENST00000587629 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
SDF2-205ENST00000587629 SCAF1Q9H7N4 1312 aaKnown RBP10.88□□□□□ -0.67
SDF2-205ENST00000587629 GOLGA3Q08378 1498 aa10.88□□□□□ -0.67
SDF2-205ENST00000587629 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
SDF2-205ENST00000587629 WDR7Q9Y4E6 1490 aa10.87□□□□□ -0.67
SDF2-205ENST00000587629 RANGAP1P46060 587 aaPredicted RBP10.87□□□□□ -0.67
SDF2-205ENST00000587629 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
SDF2-205ENST00000587629 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
SDF2-205ENST00000587629 ADGRL1O94910 1474 aa10.85□□□□□ -0.67
SDF2-205ENST00000587629 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
SDF2-205ENST00000587629 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
SDF2-205ENST00000587629 ABCA8O94911 1581 aa10.84□□□□□ -0.67
SDF2-205ENST00000587629 CD109Q6YHK3 1445 aa10.84□□□□□ -0.67
SDF2-205ENST00000587629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
SDF2-205ENST00000587629 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
SDF2-205ENST00000587629 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
SDF2-205ENST00000587629 ATP10BO94823 1461 aa10.79□□□□□ -0.68
SDF2-205ENST00000587629 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
SDF2-205ENST00000587629 EHMT2Q96KQ7 1210 aa10.78□□□□□ -0.68
SDF2-205ENST00000587629 CFAP43Q8NDM7 1665 aa10.77□□□□□ -0.69
SDF2-205ENST00000587629 RAPGEF3O95398 923 aa10.74□□□□□ -0.69
SDF2-205ENST00000587629 SAMD9Q5K651 1589 aa10.73□□□□□ -0.69
SDF2-205ENST00000587629 FHOD3Q2V2M9 1422 aa10.73□□□□□ -0.69
SDF2-205ENST00000587629 RAPGEF6Q8TEU7 1601 aa10.72□□□□□ -0.69
SDF2-205ENST00000587629 ILDR1Q86SU0 546 aaPredicted RBP10.71□□□□□ -0.69
SDF2-205ENST00000587629 KIF21BO75037 1637 aa10.7□□□□□ -0.7
SDF2-205ENST00000587629 ARAP3Q8WWN8 1544 aa10.7□□□□□ -0.7
SDF2-205ENST00000587629 NUP153P49790 1475 aaKnown RBP10.7□□□□□ -0.7
SDF2-205ENST00000587629 EEA1Q15075 1411 aa10.7□□□□□ -0.7
SDF2-205ENST00000587629 ABCA9Q8IUA7 1624 aa10.69□□□□□ -0.7
SDF2-205ENST00000587629 HECW2Q9P2P5 1572 aa10.69□□□□□ -0.7
SDF2-205ENST00000587629 PLEKHD1A6NEE1 506 aa10.69□□□□□ -0.7
SDF2-205ENST00000587629 ARID4BQ4LE39 1312 aaPredicted RBP10.68□□□□□ -0.7
SDF2-205ENST00000587629 ATP1B4Q9UN42 357 aaPredicted RBP10.68□□□□□ -0.7
SDF2-205ENST00000587629 PHLDB1Q86UU1 1377 aa10.67□□□□□ -0.7
SDF2-205ENST00000587629 UBTFP17480 764 aaKnown RBP10.67□□□□□ -0.7
SDF2-205ENST00000587629 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
SDF2-205ENST00000587629 NEO1Q92859 1461 aa10.65□□□□□ -0.7
SDF2-205ENST00000587629 FRMPD1Q5SYB0 1578 aa10.62□□□□□ -0.71
SDF2-205ENST00000587629 AKNAQ7Z591 1439 aa10.62□□□□□ -0.71
SDF2-205ENST00000587629 CDK13Q14004 1512 aaKnown RBP10.62□□□□□ -0.71
SDF2-205ENST00000587629 PTPRMP28827 1452 aa10.61□□□□□ -0.71
SDF2-205ENST00000587629 EFCAB5A4FU69 1503 aa10.61□□□□□ -0.71
SDF2-205ENST00000587629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.61□□□□□ -0.71
SDF2-205ENST00000587629 FANCAO15360 1455 aa10.61□□□□□ -0.71
SDF2-205ENST00000587629 DENND4BO75064 1496 aaPredicted RBP10.61□□□□□ -0.71
SDF2-205ENST00000587629 TTC37Q6PGP7 1564 aa10.6□□□□□ -0.71
SDF2-205ENST00000587629 ADAMTSL3P82987 1691 aa10.59□□□□□ -0.71
SDF2-205ENST00000587629 MLECQ14165 292 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms