RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 KIAA0586Q9BVV6 1533 aa39.81■■■■□ 3.96
CHAF1A-205ENST00000587580 JPH4Q96JJ6 628 aa39.79■■■■□ 3.96
CHAF1A-205ENST00000587580 PRG4Q92954 1404 aaPredicted RBP39.79■■■■□ 3.96
CHAF1A-205ENST00000587580 RAPGEF2Q9Y4G8 1499 aa39.74■■■■□ 3.95
CHAF1A-205ENST00000587580 IQGAP2Q13576 1575 aa39.59■■■■□ 3.93
CHAF1A-205ENST00000587580 PRXQ9BXM0 1461 aa39.53■■■■□ 3.92
CHAF1A-205ENST00000587580 CHIC1Q5VXU3 224 aa39.46■■■■□ 3.91
CHAF1A-205ENST00000587580 EEA1Q15075 1411 aa39.45■■■■□ 3.91
CHAF1A-205ENST00000587580 CTTNBP2Q8WZ74 1663 aa39.44■■■■□ 3.9
CHAF1A-205ENST00000587580 CSRNP3Q8WYN3 585 aa39.41■■■■□ 3.9
CHAF1A-205ENST00000587580 CARMIL2Q6F5E8 1435 aa39.4■■■■□ 3.9
CHAF1A-205ENST00000587580 TRHP20396 242 aaPredicted RBP39.38■■■■□ 3.89
CHAF1A-205ENST00000587580 UGGT2Q9NYU1 1516 aa39.35■■■■□ 3.89
CHAF1A-205ENST00000587580 DISP1Q96F81 1524 aa39.3■■■■□ 3.88
CHAF1A-205ENST00000587580 FAM9AQ8IZU1 332 aaPredicted RBP39.28■■■■□ 3.88
CHAF1A-205ENST00000587580 TNIKQ9UKE5 1360 aa39.28■■■■□ 3.88
CHAF1A-205ENST00000587580 PTPRGP23470 1445 aa39.26■■■■□ 3.88
CHAF1A-205ENST00000587580 ADCY10Q96PN6 1610 aa39.25■■■■□ 3.87
CHAF1A-205ENST00000587580 KIAA0556O60303 1618 aa39.23■■■■□ 3.87
CHAF1A-205ENST00000587580 TTBK1Q5TCY1 1321 aaPredicted RBP39.22■■■■□ 3.87
CHAF1A-205ENST00000587580 GOLGA3Q08378 1498 aa39.11■■■■□ 3.85
CHAF1A-205ENST00000587580 KIF21BO75037 1637 aa39.1■■■■□ 3.85
CHAF1A-205ENST00000587580 NPM1P06748 294 aaKnown RBP eCLIP39.09■■■■□ 3.85
CHAF1A-205ENST00000587580 MAPKBP1O60336 1514 aa39.03■■■■□ 3.84
CHAF1A-205ENST00000587580 UACAQ9BZF9 1416 aa39.01■■■■□ 3.84
CHAF1A-205ENST00000587580 UHRF1BP1LA0JNW5 1464 aa38.98■■■■□ 3.83
CHAF1A-205ENST00000587580 ABCC2Q92887 1545 aa38.97■■■■□ 3.83
CHAF1A-205ENST00000587580 KIF13AQ9H1H9 1805 aa38.93■■■■□ 3.82
CHAF1A-205ENST00000587580 SAMD9Q5K651 1589 aa38.89■■■■□ 3.82
CHAF1A-205ENST00000587580 ABCC10Q5T3U5 1492 aa38.86■■■■□ 3.81
CHAF1A-205ENST00000587580 PLB1Q6P1J6 1458 aa38.84■■■■□ 3.81
CHAF1A-205ENST00000587580 DIP2BQ9P265 1576 aa38.82■■■■□ 3.81
CHAF1A-205ENST00000587580 P3H3Q8IVL6 736 aa38.82■■■■□ 3.8
CHAF1A-205ENST00000587580 EHMT2Q96KQ7 1210 aa38.82■■■■□ 3.8
CHAF1A-205ENST00000587580 KDM5BQ9UGL1 1544 aa38.8■■■■□ 3.8
CHAF1A-205ENST00000587580 ABCA8O94911 1581 aa38.79■■■■□ 3.8
CHAF1A-205ENST00000587580 RANGAP1P46060 587 aaPredicted RBP38.78■■■■□ 3.8
CHAF1A-205ENST00000587580 ZCCHC11Q5TAX3 1644 aaKnown RBP38.78■■■■□ 3.8
CHAF1A-205ENST00000587580 FAM69CQ0P6D2 419 aa38.76■■■■□ 3.8
CHAF1A-205ENST00000587580 ASXL2Q76L83 1435 aa38.74■■■■□ 3.79
CHAF1A-205ENST00000587580 UBTFP17480 764 aaKnown RBP38.72■■■■□ 3.79
CHAF1A-205ENST00000587580 EFCAB5A4FU69 1503 aa38.67■■■■□ 3.78
CHAF1A-205ENST00000587580 FHOD3Q2V2M9 1422 aa38.64■■■■□ 3.78
CHAF1A-205ENST00000587580 RAPGEF6Q8TEU7 1601 aa38.57■■■■□ 3.77
CHAF1A-205ENST00000587580 GLI2P10070 1586 aa38.54■■■■□ 3.76
CHAF1A-205ENST00000587580 TSPOAP1O95153 1857 aa38.53■■■■□ 3.76
CHAF1A-205ENST00000587580 WDR7Q9Y4E6 1490 aa38.53■■■■□ 3.76
CHAF1A-205ENST00000587580 EPRSP07814 1512 aaKnown RBP38.52■■■■□ 3.76
CHAF1A-205ENST00000587580 ARID3CA6NKF2 412 aa38.47■■■■□ 3.75
CHAF1A-205ENST00000587580 ATP10BO94823 1461 aa38.44■■■■□ 3.74
CHAF1A-205ENST00000587580 ARHGAP35Q9NRY4 1499 aa38.43■■■■□ 3.74
CHAF1A-205ENST00000587580 NUP153P49790 1475 aaKnown RBP38.4■■■■□ 3.74
CHAF1A-205ENST00000587580 MAP3K4Q9Y6R4 1608 aa38.38■■■■□ 3.74
CHAF1A-205ENST00000587580 PPRC1Q5VV67 1664 aaKnown RBP38.36■■■■□ 3.73
CHAF1A-205ENST00000587580 KCNH8Q96L42 1107 aa38.3■■■■□ 3.72
CHAF1A-205ENST00000587580 FMN1Q68DA7 1419 aa38.29■■■■□ 3.72
CHAF1A-205ENST00000587580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.28■■■■□ 3.72
CHAF1A-205ENST00000587580 HNRNPUL2Q1KMD3 747 aaKnown RBP38.28■■■■□ 3.72
CHAF1A-205ENST00000587580 KDM6BO15054 1643 aa38.27■■■■□ 3.72
CHAF1A-205ENST00000587580 CFAP43Q8NDM7 1665 aa38.25■■■■□ 3.71
CHAF1A-205ENST00000587580 TEX14Q8IWB6 1497 aa38.21■■■■□ 3.71
CHAF1A-205ENST00000587580 HECW1Q76N89 1606 aa38.19■■■■□ 3.7
CHAF1A-205ENST00000587580 CD109Q6YHK3 1445 aa38.17■■■■□ 3.7
CHAF1A-205ENST00000587580 CDK13Q14004 1512 aaKnown RBP38.14■■■■□ 3.7
CHAF1A-205ENST00000587580 CLIP1P30622 1438 aa38.12■■■■□ 3.69
CHAF1A-205ENST00000587580 ABCA9Q8IUA7 1624 aa38.11■■■■□ 3.69
CHAF1A-205ENST00000587580 MAGI3Q5TCQ9 1506 aa38.11■■■■□ 3.69
CHAF1A-205ENST00000587580 ATP1B4Q9UN42 357 aaPredicted RBP38.1■■■■□ 3.69
CHAF1A-205ENST00000587580 PLEKHD1A6NEE1 506 aa38.07■■■■□ 3.68
CHAF1A-205ENST00000587580 PCF11O94913 1555 aaKnown RBP38.02■■■■□ 3.68
CHAF1A-205ENST00000587580 COL17A1Q9UMD9 1497 aaPredicted RBP37.98■■■■□ 3.67
CHAF1A-205ENST00000587580 LRRIQ1Q96JM4 1722 aa37.98■■■■□ 3.67
CHAF1A-205ENST00000587580 CASKIN1Q8WXD9 1431 aa37.96■■■■□ 3.67
CHAF1A-205ENST00000587580 CEP162Q5TB80 1403 aa37.9■■■■□ 3.66
CHAF1A-205ENST00000587580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.9■■■■□ 3.661e-6■■■■■ 42.9
CHAF1A-205ENST00000587580 FYCO1Q9BQS8 1478 aa37.88■■■■□ 3.65
CHAF1A-205ENST00000587580 TTC37Q6PGP7 1564 aa37.87■■■■□ 3.65
CHAF1A-205ENST00000587580 CCDC18Q5T9S5 1454 aa37.86■■■■□ 3.65
CHAF1A-205ENST00000587580 CDK11AQ9UQ88 783 aaPredicted RBP37.86■■■■□ 3.65
CHAF1A-205ENST00000587580 LOC105371045A0A1W2PR82 267 aa37.84■■■■□ 3.65
CHAF1A-205ENST00000587580 NEO1Q92859 1461 aa37.8■■■■□ 3.64
CHAF1A-205ENST00000587580 TROQ12816 1431 aaPredicted RBP37.79■■■■□ 3.64
CHAF1A-205ENST00000587580 ARAP3Q8WWN8 1544 aa37.78■■■■□ 3.64
CHAF1A-205ENST00000587580 KIF14Q15058 1648 aa37.77■■■■□ 3.64
CHAF1A-205ENST00000587580 PHLDB1Q86UU1 1377 aa37.77■■■■□ 3.64
CHAF1A-205ENST00000587580 CFAP74Q9C0B2 1584 aa37.72■■■■□ 3.63
CHAF1A-205ENST00000587580 FANCAO15360 1455 aa37.69■■■■□ 3.62
CHAF1A-205ENST00000587580 MYO5CQ9NQX4 1742 aa37.67■■■■□ 3.62
CHAF1A-205ENST00000587580 PLCH2O75038 1416 aa37.64■■■■□ 3.62
CHAF1A-205ENST00000587580 AKNAQ7Z591 1439 aa37.62■■■■□ 3.61
CHAF1A-205ENST00000587580 FRMPD1Q5SYB0 1578 aa37.58■■■■□ 3.61
CHAF1A-205ENST00000587580 RAPGEF3O95398 923 aa37.56■■■■□ 3.6
CHAF1A-205ENST00000587580 AEBP2Q6ZN18 517 aaPredicted RBP37.55■■■■□ 3.6
CHAF1A-205ENST00000587580 DENND4BO75064 1496 aaPredicted RBP37.53■■■■□ 3.6
CHAF1A-205ENST00000587580 RICTORQ6R327 1708 aa37.51■■■■□ 3.6
CHAF1A-205ENST00000587580 ADGRL1O94910 1474 aa37.5■■■■□ 3.59
CHAF1A-205ENST00000587580 ARHGAP5Q13017 1502 aa37.5■■■■□ 3.59
CHAF1A-205ENST00000587580 EFCAB2Q5VUJ9 269 aa37.47■■■■□ 3.59
CHAF1A-205ENST00000587580 PREX2Q70Z35 1606 aa37.47■■■■□ 3.59
CHAF1A-205ENST00000587580 VPS8Q8N3P4 1428 aa37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms