RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
PRKCSH-206ENST00000587509 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
PRKCSH-206ENST00000587509 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
PRKCSH-206ENST00000587509 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
PRKCSH-206ENST00000587509 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
PRKCSH-206ENST00000587509 EEA1Q15075 1411 aa19.7■□□□□ 0.74
PRKCSH-206ENST00000587509 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
PRKCSH-206ENST00000587509 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
PRKCSH-206ENST00000587509 CTTNBP2Q8WZ74 1663 aa19.61■□□□□ 0.73
PRKCSH-206ENST00000587509 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
PRKCSH-206ENST00000587509 UGGT2Q9NYU1 1516 aa19.57■□□□□ 0.72
PRKCSH-206ENST00000587509 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
PRKCSH-206ENST00000587509 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
PRKCSH-206ENST00000587509 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
PRKCSH-206ENST00000587509 PTPRGP23470 1445 aa19.53■□□□□ 0.72
PRKCSH-206ENST00000587509 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.72
PRKCSH-206ENST00000587509 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
PRKCSH-206ENST00000587509 DISP1Q96F81 1524 aa19.5■□□□□ 0.71
PRKCSH-206ENST00000587509 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
PRKCSH-206ENST00000587509 ADCY10Q96PN6 1610 aa19.47■□□□□ 0.71
PRKCSH-206ENST00000587509 KIF21BO75037 1637 aa19.45■□□□□ 0.7
PRKCSH-206ENST00000587509 MAPKBP1O60336 1514 aa19.45■□□□□ 0.7
PRKCSH-206ENST00000587509 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
PRKCSH-206ENST00000587509 TTBK1Q5TCY1 1321 aaPredicted RBP19.42■□□□□ 0.7
PRKCSH-206ENST00000587509 UHRF1BP1LA0JNW5 1464 aa19.41■□□□□ 0.7
PRKCSH-206ENST00000587509 UACAQ9BZF9 1416 aa19.41■□□□□ 0.7
PRKCSH-206ENST00000587509 ABCC2Q92887 1545 aa19.41■□□□□ 0.7
PRKCSH-206ENST00000587509 ABCC10Q5T3U5 1492 aa19.34■□□□□ 0.69
PRKCSH-206ENST00000587509 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
PRKCSH-206ENST00000587509 PLB1Q6P1J6 1458 aa19.31■□□□□ 0.68
PRKCSH-206ENST00000587509 DIP2BQ9P265 1576 aa19.31■□□□□ 0.68
PRKCSH-206ENST00000587509 EFCAB5A4FU69 1503 aa19.3■□□□□ 0.68
PRKCSH-206ENST00000587509 KDM5BQ9UGL1 1544 aa19.3■□□□□ 0.68
PRKCSH-206ENST00000587509 KIF13AQ9H1H9 1805 aa19.28■□□□□ 0.68
PRKCSH-206ENST00000587509 ABCA8O94911 1581 aa19.27■□□□□ 0.67
PRKCSH-206ENST00000587509 ASXL2Q76L83 1435 aa19.26■□□□□ 0.67
PRKCSH-206ENST00000587509 FAM69CQ0P6D2 419 aa19.26■□□□□ 0.67
PRKCSH-206ENST00000587509 ZCCHC11Q5TAX3 1644 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-206ENST00000587509 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-206ENST00000587509 WDR7Q9Y4E6 1490 aa19.19■□□□□ 0.66
PRKCSH-206ENST00000587509 GLI2P10070 1586 aa19.19■□□□□ 0.66
PRKCSH-206ENST00000587509 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-206ENST00000587509 P3H3Q8IVL6 736 aa19.18■□□□□ 0.66
PRKCSH-206ENST00000587509 RAPGEF6Q8TEU7 1601 aa19.18■□□□□ 0.66
PRKCSH-206ENST00000587509 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
PRKCSH-206ENST00000587509 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-206ENST00000587509 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
PRKCSH-206ENST00000587509 FMN1Q68DA7 1419 aa19.11■□□□□ 0.65
PRKCSH-206ENST00000587509 TEX14Q8IWB6 1497 aa19.1■□□□□ 0.65
PRKCSH-206ENST00000587509 TSPOAP1O95153 1857 aa19.07■□□□□ 0.64
PRKCSH-206ENST00000587509 MAP3K4Q9Y6R4 1608 aa19.07■□□□□ 0.64
PRKCSH-206ENST00000587509 KDM6BO15054 1643 aa19.07■□□□□ 0.64
PRKCSH-206ENST00000587509 ATP10BO94823 1461 aa19.06■□□□□ 0.64
PRKCSH-206ENST00000587509 NUP153P49790 1475 aaKnown RBP19.06■□□□□ 0.64
PRKCSH-206ENST00000587509 ARHGAP35Q9NRY4 1499 aa19.05■□□□□ 0.64
PRKCSH-206ENST00000587509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
PRKCSH-206ENST00000587509 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
PRKCSH-206ENST00000587509 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
PRKCSH-206ENST00000587509 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
PRKCSH-206ENST00000587509 ARID3CA6NKF2 412 aa19.02■□□□□ 0.64
PRKCSH-206ENST00000587509 PPRC1Q5VV67 1664 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-206ENST00000587509 KCNH8Q96L42 1107 aa18.99■□□□□ 0.63
PRKCSH-206ENST00000587509 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
PRKCSH-206ENST00000587509 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
PRKCSH-206ENST00000587509 CLIP1P30622 1438 aa18.96■□□□□ 0.63
PRKCSH-206ENST00000587509 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
PRKCSH-206ENST00000587509 ABCA9Q8IUA7 1624 aa18.95■□□□□ 0.62
PRKCSH-206ENST00000587509 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
PRKCSH-206ENST00000587509 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
PRKCSH-206ENST00000587509 CDK13Q14004 1512 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-206ENST00000587509 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
PRKCSH-206ENST00000587509 FYCO1Q9BQS8 1478 aa18.9■□□□□ 0.62
PRKCSH-206ENST00000587509 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
PRKCSH-206ENST00000587509 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
PRKCSH-206ENST00000587509 PCF11O94913 1555 aaKnown RBP18.88■□□□□ 0.61
PRKCSH-206ENST00000587509 CFAP74Q9C0B2 1584 aa18.86■□□□□ 0.61
PRKCSH-206ENST00000587509 NEO1Q92859 1461 aa18.85■□□□□ 0.61
PRKCSH-206ENST00000587509 KIF14Q15058 1648 aa18.84■□□□□ 0.61
PRKCSH-206ENST00000587509 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
PRKCSH-206ENST00000587509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.81■□□□□ 0.62e-23■□□□□ 8.5
PRKCSH-206ENST00000587509 ARAP3Q8WWN8 1544 aa18.81■□□□□ 0.6
PRKCSH-206ENST00000587509 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
PRKCSH-206ENST00000587509 TTC37Q6PGP7 1564 aa18.8■□□□□ 0.6
PRKCSH-206ENST00000587509 FANCAO15360 1455 aa18.77■□□□□ 0.59
PRKCSH-206ENST00000587509 COL17A1Q9UMD9 1497 aaPredicted RBP18.77■□□□□ 0.59
PRKCSH-206ENST00000587509 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
PRKCSH-206ENST00000587509 LRRIQ1Q96JM4 1722 aa18.74■□□□□ 0.59
PRKCSH-206ENST00000587509 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
PRKCSH-206ENST00000587509 PLCH2O75038 1416 aa18.71■□□□□ 0.59
PRKCSH-206ENST00000587509 AKNAQ7Z591 1439 aa18.7■□□□□ 0.58
PRKCSH-206ENST00000587509 DENND4BO75064 1496 aaPredicted RBP18.7■□□□□ 0.58
PRKCSH-206ENST00000587509 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
PRKCSH-206ENST00000587509 ARHGAP5Q13017 1502 aa18.68■□□□□ 0.58
PRKCSH-206ENST00000587509 EFCAB2Q5VUJ9 269 aa18.66■□□□□ 0.58
PRKCSH-206ENST00000587509 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
PRKCSH-206ENST00000587509 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.58
PRKCSH-206ENST00000587509 PREX2Q70Z35 1606 aa18.64■□□□□ 0.57
PRKCSH-206ENST00000587509 VPS8Q8N3P4 1428 aa18.64■□□□□ 0.57
PRKCSH-206ENST00000587509 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.57
PRKCSH-206ENST00000587509 POGZQ7Z3K3 1410 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms