RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 RUSC2Q8N2Y8 1516 aa39.91■■■■□ 3.98
LSM7-204ENST00000587502 PRG4Q92954 1404 aaPredicted RBP39.9■■■■□ 3.98
LSM7-204ENST00000587502 TRHP20396 242 aaPredicted RBP39.89■■■■□ 3.98
LSM7-204ENST00000587502 KIAA0586Q9BVV6 1533 aa39.85■■■■□ 3.97
LSM7-204ENST00000587502 RAPGEF2Q9Y4G8 1499 aa39.62■■■■□ 3.93
LSM7-204ENST00000587502 IQGAP2Q13576 1575 aa39.51■■■■□ 3.92
LSM7-204ENST00000587502 CARMIL2Q6F5E8 1435 aa39.48■■■■□ 3.91
LSM7-204ENST00000587502 NPM1P06748 294 aaKnown RBP eCLIP39.43■■■■□ 3.9
LSM7-204ENST00000587502 PTPRGP23470 1445 aa39.39■■■■□ 3.9
LSM7-204ENST00000587502 TNIKQ9UKE5 1360 aa39.37■■■■□ 3.89
LSM7-204ENST00000587502 PRXQ9BXM0 1461 aa39.33■■■■□ 3.89
LSM7-204ENST00000587502 ADCY10Q96PN6 1610 aa39.31■■■■□ 3.88
LSM7-204ENST00000587502 UGGT2Q9NYU1 1516 aa39.3■■■■□ 3.88
LSM7-204ENST00000587502 DISP1Q96F81 1524 aa39.25■■■■□ 3.87
LSM7-204ENST00000587502 MAPKBP1O60336 1514 aa39.23■■■■□ 3.87
LSM7-204ENST00000587502 TTBK1Q5TCY1 1321 aaPredicted RBP39.22■■■■□ 3.87
LSM7-204ENST00000587502 CSRNP3Q8WYN3 585 aa39.21■■■■□ 3.87
LSM7-204ENST00000587502 AEBP2Q6ZN18 517 aaPredicted RBP39.2■■■■□ 3.87
LSM7-204ENST00000587502 CTTNBP2Q8WZ74 1663 aa39.19■■■■□ 3.86
LSM7-204ENST00000587502 EEA1Q15075 1411 aa39.19■■■■□ 3.86
LSM7-204ENST00000587502 ABCC10Q5T3U5 1492 aa39.12■■■■□ 3.85
LSM7-204ENST00000587502 KIAA0556O60303 1618 aa39.12■■■■□ 3.85
LSM7-204ENST00000587502 KIF13AQ9H1H9 1805 aa39.1■■■■□ 3.85
LSM7-204ENST00000587502 UACAQ9BZF9 1416 aa39.1■■■■□ 3.85
LSM7-204ENST00000587502 UHRF1BP1LA0JNW5 1464 aa39.1■■■■□ 3.85
LSM7-204ENST00000587502 GOLGA3Q08378 1498 aa39.1■■■■□ 3.85
LSM7-204ENST00000587502 ABCC2Q92887 1545 aa39.09■■■■□ 3.85
LSM7-204ENST00000587502 FAM69CQ0P6D2 419 aa39.08■■■■□ 3.85
LSM7-204ENST00000587502 DIP2BQ9P265 1576 aa38.99■■■■□ 3.83
LSM7-204ENST00000587502 CHIC1Q5VXU3 224 aa38.92■■■■□ 3.82
LSM7-204ENST00000587502 PLB1Q6P1J6 1458 aa38.91■■■■□ 3.82
LSM7-204ENST00000587502 KDM5BQ9UGL1 1544 aa38.89■■■■□ 3.82
LSM7-204ENST00000587502 FAM9AQ8IZU1 332 aaPredicted RBP38.89■■■■□ 3.82
LSM7-204ENST00000587502 ASXL2Q76L83 1435 aa38.88■■■■□ 3.81
LSM7-204ENST00000587502 ZCCHC11Q5TAX3 1644 aaKnown RBP38.75■■■■□ 3.79
LSM7-204ENST00000587502 KIF21BO75037 1637 aa38.74■■■■□ 3.79
LSM7-204ENST00000587502 ABCA8O94911 1581 aa38.74■■■■□ 3.79
LSM7-204ENST00000587502 GLI2P10070 1586 aa38.73■■■■□ 3.79
LSM7-204ENST00000587502 P3H3Q8IVL6 736 aa38.7■■■■□ 3.79
LSM7-204ENST00000587502 SAMD9Q5K651 1589 aa38.69■■■■□ 3.78
LSM7-204ENST00000587502 TSPOAP1O95153 1857 aa38.65■■■■□ 3.78
LSM7-204ENST00000587502 EPRSP07814 1512 aaKnown RBP38.64■■■■□ 3.78
LSM7-204ENST00000587502 WDR7Q9Y4E6 1490 aa38.6■■■■□ 3.77
LSM7-204ENST00000587502 RANGAP1P46060 587 aaPredicted RBP38.54■■■■□ 3.76
LSM7-204ENST00000587502 KDM6BO15054 1643 aa38.52■■■■□ 3.76
LSM7-204ENST00000587502 UBTFP17480 764 aaKnown RBP38.49■■■■□ 3.75
LSM7-204ENST00000587502 MAP3K4Q9Y6R4 1608 aa38.48■■■■□ 3.75
LSM7-204ENST00000587502 EFCAB5A4FU69 1503 aa38.48■■■■□ 3.75
LSM7-204ENST00000587502 PPRC1Q5VV67 1664 aaKnown RBP38.45■■■■□ 3.75
LSM7-204ENST00000587502 ATP10BO94823 1461 aa38.44■■■■□ 3.74
LSM7-204ENST00000587502 TEX14Q8IWB6 1497 aa38.44■■■■□ 3.74
LSM7-204ENST00000587502 RAPGEF6Q8TEU7 1601 aa38.44■■■■□ 3.74
LSM7-204ENST00000587502 FHOD3Q2V2M9 1422 aa38.43■■■■□ 3.74
LSM7-204ENST00000587502 KCNH8Q96L42 1107 aa38.42■■■■□ 3.74
LSM7-204ENST00000587502 ARID3CA6NKF2 412 aa38.38■■■■□ 3.73
LSM7-204ENST00000587502 EHMT2Q96KQ7 1210 aa38.37■■■■□ 3.73
LSM7-204ENST00000587502 CD109Q6YHK3 1445 aa38.33■■■■□ 3.73
LSM7-204ENST00000587502 CFAP43Q8NDM7 1665 aa38.32■■■■□ 3.72
LSM7-204ENST00000587502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.3■■■■□ 3.72
LSM7-204ENST00000587502 HNRNPUL2Q1KMD3 747 aaKnown RBP38.3■■■■□ 3.72
LSM7-204ENST00000587502 NUP153P49790 1475 aaKnown RBP38.28■■■■□ 3.72
LSM7-204ENST00000587502 MAGI3Q5TCQ9 1506 aa38.28■■■■□ 3.72
LSM7-204ENST00000587502 COL17A1Q9UMD9 1497 aaPredicted RBP38.16■■■■□ 3.7
LSM7-204ENST00000587502 FMN1Q68DA7 1419 aa38.16■■■■□ 3.7
LSM7-204ENST00000587502 PLEKHD1A6NEE1 506 aa38.15■■■■□ 3.7
LSM7-204ENST00000587502 ARHGAP35Q9NRY4 1499 aa38.15■■■■□ 3.7
LSM7-204ENST00000587502 ABCA9Q8IUA7 1624 aa38.12■■■■□ 3.69
LSM7-204ENST00000587502 PHLDB1Q86UU1 1377 aa38.05■■■■□ 3.68
LSM7-204ENST00000587502 ATP1B4Q9UN42 357 aaPredicted RBP37.98■■■■□ 3.67
LSM7-204ENST00000587502 HECW1Q76N89 1606 aa37.98■■■■□ 3.67
LSM7-204ENST00000587502 ARAP3Q8WWN8 1544 aa37.96■■■■□ 3.67
LSM7-204ENST00000587502 NEO1Q92859 1461 aa37.93■■■■□ 3.66
LSM7-204ENST00000587502 CDK13Q14004 1512 aaKnown RBP37.92■■■■□ 3.66
LSM7-204ENST00000587502 CDK11AQ9UQ88 783 aaPredicted RBP37.92■■■■□ 3.66
LSM7-204ENST00000587502 KDM4FA0A1W2PPD8 638 aa37.89■■■■□ 3.66
LSM7-204ENST00000587502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.83■■■■□ 3.657e-7■■□□□ 14.3
LSM7-204ENST00000587502 CLIP1P30622 1438 aa37.78■■■■□ 3.64
LSM7-204ENST00000587502 CASKIN1Q8WXD9 1431 aa37.77■■■■□ 3.64
LSM7-204ENST00000587502 TTC37Q6PGP7 1564 aa37.74■■■■□ 3.63
LSM7-204ENST00000587502 CFAP74Q9C0B2 1584 aa37.74■■■■□ 3.63
LSM7-204ENST00000587502 FANCAO15360 1455 aa37.72■■■■□ 3.63
LSM7-204ENST00000587502 ADGRL1O94910 1474 aa37.72■■■■□ 3.63
LSM7-204ENST00000587502 RAPGEF3O95398 923 aa37.71■■■■□ 3.63
LSM7-204ENST00000587502 AKNAQ7Z591 1439 aa37.7■■■■□ 3.63
LSM7-204ENST00000587502 CCDC18Q5T9S5 1454 aa37.7■■■■□ 3.63
LSM7-204ENST00000587502 TROQ12816 1431 aaPredicted RBP37.7■■■■□ 3.62
LSM7-204ENST00000587502 PLCH2O75038 1416 aa37.67■■■■□ 3.62
LSM7-204ENST00000587502 PCF11O94913 1555 aaKnown RBP37.67■■■■□ 3.62
LSM7-204ENST00000587502 DENND4BO75064 1496 aaPredicted RBP37.64■■■■□ 3.62
LSM7-204ENST00000587502 FYCO1Q9BQS8 1478 aa37.64■■■■□ 3.62
LSM7-204ENST00000587502 KIF14Q15058 1648 aa37.63■■■■□ 3.61
LSM7-204ENST00000587502 LRRIQ1Q96JM4 1722 aa37.63■■■■□ 3.61
LSM7-204ENST00000587502 FRMPD1Q5SYB0 1578 aa37.57■■■■□ 3.6
LSM7-204ENST00000587502 EFCAB2Q5VUJ9 269 aa37.57■■■■□ 3.6
LSM7-204ENST00000587502 ILDR1Q86SU0 546 aaPredicted RBP37.57■■■■□ 3.6
LSM7-204ENST00000587502 MYO5CQ9NQX4 1742 aa37.55■■■■□ 3.6
LSM7-204ENST00000587502 RICTORQ6R327 1708 aa37.51■■■■□ 3.6
LSM7-204ENST00000587502 SCAPERQ9BY12 1400 aa37.47■■■■□ 3.59
LSM7-204ENST00000587502 CEP162Q5TB80 1403 aa37.46■■■■□ 3.59
LSM7-204ENST00000587502 ARHGAP5Q13017 1502 aa37.43■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms