RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 PRG4Q92954 1404 aaPredicted RBP37.26■■■■□ 3.55
PKN1-210ENST00000587429 RUSC2Q8N2Y8 1516 aa37.24■■■■□ 3.55
PKN1-210ENST00000587429 CARMIL1Q5VZK9 1371 aa37.19■■■■□ 3.54
PKN1-210ENST00000587429 KIAA0586Q9BVV6 1533 aa37.11■■■■□ 3.53
PKN1-210ENST00000587429 RAPGEF2Q9Y4G8 1499 aa36.87■■■■□ 3.49
PKN1-210ENST00000587429 IQGAP2Q13576 1575 aa36.82■■■■□ 3.48
PKN1-210ENST00000587429 ADCY10Q96PN6 1610 aa36.76■■■■□ 3.48
PKN1-210ENST00000587429 TTBK1Q5TCY1 1321 aaPredicted RBP36.76■■■■□ 3.47
PKN1-210ENST00000587429 PTPRGP23470 1445 aa36.72■■■■□ 3.47
PKN1-210ENST00000587429 CARMIL2Q6F5E8 1435 aa36.71■■■■□ 3.47
PKN1-210ENST00000587429 NPM1P06748 294 aaKnown RBP eCLIP36.71■■■■□ 3.47
PKN1-210ENST00000587429 TNIKQ9UKE5 1360 aa36.67■■■■□ 3.46
PKN1-210ENST00000587429 KIF13AQ9H1H9 1805 aa36.66■■■■□ 3.46
PKN1-210ENST00000587429 DISP1Q96F81 1524 aa36.65■■■■□ 3.46
PKN1-210ENST00000587429 PRXQ9BXM0 1461 aa36.6■■■■□ 3.45
PKN1-210ENST00000587429 UGGT2Q9NYU1 1516 aa36.59■■■■□ 3.45
PKN1-210ENST00000587429 MAPKBP1O60336 1514 aa36.57■■■■□ 3.44
PKN1-210ENST00000587429 FAM69CQ0P6D2 419 aa36.54■■■■□ 3.44
PKN1-210ENST00000587429 CTTNBP2Q8WZ74 1663 aa36.54■■■■□ 3.44
PKN1-210ENST00000587429 ABCC10Q5T3U5 1492 aa36.52■■■■□ 3.44
PKN1-210ENST00000587429 KIAA0556O60303 1618 aa36.48■■■■□ 3.43
PKN1-210ENST00000587429 CSRNP3Q8WYN3 585 aa36.47■■■■□ 3.43
PKN1-210ENST00000587429 DIP2BQ9P265 1576 aa36.44■■■■□ 3.42
PKN1-210ENST00000587429 UACAQ9BZF9 1416 aa36.44■■■■□ 3.42
PKN1-210ENST00000587429 ABCC2Q92887 1545 aa36.44■■■■□ 3.42
PKN1-210ENST00000587429 UHRF1BP1LA0JNW5 1464 aa36.41■■■■□ 3.42
PKN1-210ENST00000587429 FAM9AQ8IZU1 332 aaPredicted RBP36.32■■■■□ 3.4
PKN1-210ENST00000587429 GOLGA3Q08378 1498 aa36.31■■■■□ 3.4
PKN1-210ENST00000587429 ASXL2Q76L83 1435 aa36.3■■■■□ 3.4
PKN1-210ENST00000587429 EEA1Q15075 1411 aa36.28■■■■□ 3.4
PKN1-210ENST00000587429 TSPOAP1O95153 1857 aa36.27■■■■□ 3.4
PKN1-210ENST00000587429 KDM5BQ9UGL1 1544 aa36.26■■■■□ 3.4
PKN1-210ENST00000587429 PLB1Q6P1J6 1458 aa36.24■■■■□ 3.39
PKN1-210ENST00000587429 CHIC1Q5VXU3 224 aa36.22■■■■□ 3.39
PKN1-210ENST00000587429 ZCCHC11Q5TAX3 1644 aaKnown RBP36.2■■■■□ 3.39
PKN1-210ENST00000587429 P3H3Q8IVL6 736 aa36.2■■■■□ 3.39
PKN1-210ENST00000587429 ABCA8O94911 1581 aa36.13■■■■□ 3.37
PKN1-210ENST00000587429 GLI2P10070 1586 aa36.1■■■■□ 3.37
PKN1-210ENST00000587429 EPRSP07814 1512 aaKnown RBP36.07■■■■□ 3.36
PKN1-210ENST00000587429 RANGAP1P46060 587 aaPredicted RBP36.06■■■■□ 3.36
PKN1-210ENST00000587429 SAMD9Q5K651 1589 aa36.03■■■■□ 3.36
PKN1-210ENST00000587429 PPRC1Q5VV67 1664 aaKnown RBP36.02■■■■□ 3.36
PKN1-210ENST00000587429 KDM6BO15054 1643 aa36.01■■■■□ 3.35
PKN1-210ENST00000587429 KIF21BO75037 1637 aa36■■■■□ 3.35
PKN1-210ENST00000587429 WDR7Q9Y4E6 1490 aa35.99■■■■□ 3.35
PKN1-210ENST00000587429 ARID3CA6NKF2 412 aa35.97■■■■□ 3.35
PKN1-210ENST00000587429 EHMT2Q96KQ7 1210 aa35.96■■■■□ 3.35
PKN1-210ENST00000587429 MAP3K4Q9Y6R4 1608 aa35.94■■■■□ 3.34
PKN1-210ENST00000587429 KCNH8Q96L42 1107 aa35.92■■■■□ 3.34
PKN1-210ENST00000587429 AEBP2Q6ZN18 517 aaPredicted RBP35.89■■■■□ 3.34
PKN1-210ENST00000587429 ATP10BO94823 1461 aa35.87■■■■□ 3.33
PKN1-210ENST00000587429 FHOD3Q2V2M9 1422 aa35.86■■■■□ 3.33
PKN1-210ENST00000587429 RAPGEF6Q8TEU7 1601 aa35.82■■■■□ 3.32
PKN1-210ENST00000587429 UBTFP17480 764 aaKnown RBP35.81■■■■□ 3.32
PKN1-210ENST00000587429 COL17A1Q9UMD9 1497 aaPredicted RBP35.79■■■■□ 3.32
PKN1-210ENST00000587429 TEX14Q8IWB6 1497 aa35.77■■■■□ 3.32
PKN1-210ENST00000587429 CD109Q6YHK3 1445 aa35.75■■■■□ 3.31
PKN1-210ENST00000587429 CFAP43Q8NDM7 1665 aa35.73■■■■□ 3.31
PKN1-210ENST00000587429 EFCAB5A4FU69 1503 aa35.72■■■■□ 3.31
PKN1-210ENST00000587429 NUP153P49790 1475 aaKnown RBP35.71■■■■□ 3.31
PKN1-210ENST00000587429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.7■■■■□ 3.31
PKN1-210ENST00000587429 HNRNPUL2Q1KMD3 747 aaKnown RBP35.7■■■■□ 3.31
PKN1-210ENST00000587429 MAGI3Q5TCQ9 1506 aa35.67■■■■□ 3.3
PKN1-210ENST00000587429 KDM4FA0A1W2PPD8 638 aa35.56■■■■□ 3.28
PKN1-210ENST00000587429 ARHGAP35Q9NRY4 1499 aa35.54■■■■□ 3.28
PKN1-210ENST00000587429 ABCA9Q8IUA7 1624 aa35.54■■■■□ 3.28
PKN1-210ENST00000587429 PLEKHD1A6NEE1 506 aa35.5■■■■□ 3.27
PKN1-210ENST00000587429 CDK13Q14004 1512 aaKnown RBP35.44■■■■□ 3.26
PKN1-210ENST00000587429 ATP1B4Q9UN42 357 aaPredicted RBP35.43■■■■□ 3.26
PKN1-210ENST00000587429 FMN1Q68DA7 1419 aa35.41■■■■□ 3.26
PKN1-210ENST00000587429 ARAP3Q8WWN8 1544 aa35.38■■■■□ 3.25
PKN1-210ENST00000587429 PHLDB1Q86UU1 1377 aa35.32■■■■□ 3.24
PKN1-210ENST00000587429 HECW1Q76N89 1606 aa35.32■■■■□ 3.24
PKN1-210ENST00000587429 ADGRL1O94910 1474 aa35.31■■■■□ 3.24
PKN1-210ENST00000587429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.31■■■■□ 3.242e-7■□□□□ 10.2
PKN1-210ENST00000587429 NEO1Q92859 1461 aa35.3■■■■□ 3.24
PKN1-210ENST00000587429 RAPGEF3O95398 923 aa35.28■■■■□ 3.24
PKN1-210ENST00000587429 TTC37Q6PGP7 1564 aa35.26■■■■□ 3.24
PKN1-210ENST00000587429 LRRIQ1Q96JM4 1722 aa35.21■■■■□ 3.23
PKN1-210ENST00000587429 CDK11AQ9UQ88 783 aaPredicted RBP35.17■■■■□ 3.22
PKN1-210ENST00000587429 FANCAO15360 1455 aa35.16■■■■□ 3.22
PKN1-210ENST00000587429 AKNAQ7Z591 1439 aa35.16■■■■□ 3.22
PKN1-210ENST00000587429 FRMPD1Q5SYB0 1578 aa35.15■■■■□ 3.22
PKN1-210ENST00000587429 CLIP1P30622 1438 aa35.13■■■■□ 3.21
PKN1-210ENST00000587429 PCF11O94913 1555 aaKnown RBP35.12■■■■□ 3.21
PKN1-210ENST00000587429 CASKIN1Q8WXD9 1431 aa35.11■■■■□ 3.21
PKN1-210ENST00000587429 KIF14Q15058 1648 aa35.09■■■■□ 3.21
PKN1-210ENST00000587429 PLCH2O75038 1416 aa35.08■■■■□ 3.21
PKN1-210ENST00000587429 TROQ12816 1431 aaPredicted RBP35.08■■■■□ 3.21
PKN1-210ENST00000587429 DENND4BO75064 1496 aaPredicted RBP35.08■■■■□ 3.21
PKN1-210ENST00000587429 CFAP74Q9C0B2 1584 aa35.08■■■■□ 3.21
PKN1-210ENST00000587429 RICTORQ6R327 1708 aa35.05■■■■□ 3.2
PKN1-210ENST00000587429 MYO5CQ9NQX4 1742 aa35.01■■■■□ 3.19
PKN1-210ENST00000587429 CCDC18Q5T9S5 1454 aa34.98■■■■□ 3.19
PKN1-210ENST00000587429 FYCO1Q9BQS8 1478 aa34.97■■■■□ 3.19
PKN1-210ENST00000587429 EFCAB2Q5VUJ9 269 aa34.96■■■■□ 3.19
PKN1-210ENST00000587429 SCAPERQ9BY12 1400 aa34.96■■■■□ 3.19
PKN1-210ENST00000587429 ARHGEF40Q8TER5 1519 aa34.89■■■■□ 3.18
PKN1-210ENST00000587429 ARID4BQ4LE39 1312 aaPredicted RBP34.88■■■■□ 3.17
PKN1-210ENST00000587429 ARHGAP5Q13017 1502 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms