RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
NFIX-208ENST00000587260 UBTFP17480 764 aaKnown RBP24.25■■□□□ 1.47
NFIX-208ENST00000587260 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
NFIX-208ENST00000587260 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.46
NFIX-208ENST00000587260 KIAA0586Q9BVV6 1533 aa24.17■■□□□ 1.46
NFIX-208ENST00000587260 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
NFIX-208ENST00000587260 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
NFIX-208ENST00000587260 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
NFIX-208ENST00000587260 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
NFIX-208ENST00000587260 UGGT2Q9NYU1 1516 aa24.03■■□□□ 1.44
NFIX-208ENST00000587260 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
NFIX-208ENST00000587260 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
NFIX-208ENST00000587260 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
NFIX-208ENST00000587260 KIAA0556O60303 1618 aa23.98■■□□□ 1.43
NFIX-208ENST00000587260 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
NFIX-208ENST00000587260 EFCAB5A4FU69 1503 aa23.96■■□□□ 1.43
NFIX-208ENST00000587260 CLIP1P30622 1438 aa23.96■■□□□ 1.43
NFIX-208ENST00000587260 DISP1Q96F81 1524 aa23.95■■□□□ 1.43
NFIX-208ENST00000587260 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
NFIX-208ENST00000587260 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
NFIX-208ENST00000587260 CARMIL2Q6F5E8 1435 aa23.89■■□□□ 1.42
NFIX-208ENST00000587260 P3H3Q8IVL6 736 aa23.89■■□□□ 1.41
NFIX-208ENST00000587260 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
NFIX-208ENST00000587260 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
NFIX-208ENST00000587260 ARAP1Q96P48 1450 aa23.85■■□□□ 1.41
NFIX-208ENST00000587260 RIMBP3CA6NJZ7 1639 aa23.84■■□□□ 1.41
NFIX-208ENST00000587260 RIMBP3BA6NNM3 1639 aa23.84■■□□□ 1.41
NFIX-208ENST00000587260 RIMBP3Q9UFD9 1639 aa23.84■■□□□ 1.41
NFIX-208ENST00000587260 TTBK1Q5TCY1 1321 aaPredicted RBP23.81■■□□□ 1.4
NFIX-208ENST00000587260 PTPRGP23470 1445 aa23.71■■□□□ 1.39
NFIX-208ENST00000587260 PCF11O94913 1555 aaKnown RBP23.7■■□□□ 1.38
NFIX-208ENST00000587260 FMN1Q68DA7 1419 aa23.69■■□□□ 1.38
NFIX-208ENST00000587260 RAPGEF6Q8TEU7 1601 aa23.67■■□□□ 1.38
NFIX-208ENST00000587260 PLB1Q6P1J6 1458 aa23.66■■□□□ 1.38
NFIX-208ENST00000587260 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
NFIX-208ENST00000587260 ABCA8O94911 1581 aa23.64■■□□□ 1.38
NFIX-208ENST00000587260 HECW1Q76N89 1606 aa23.61■■□□□ 1.37
NFIX-208ENST00000587260 LRRIQ1Q96JM4 1722 aa23.59■■□□□ 1.37
NFIX-208ENST00000587260 ADCY10Q96PN6 1610 aa23.59■■□□□ 1.37
NFIX-208ENST00000587260 FYCO1Q9BQS8 1478 aa23.59■■□□□ 1.37
NFIX-208ENST00000587260 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
NFIX-208ENST00000587260 ABCC2Q92887 1545 aa23.58■■□□□ 1.36
NFIX-208ENST00000587260 CASKIN1Q8WXD9 1431 aa23.57■■□□□ 1.36
NFIX-208ENST00000587260 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
NFIX-208ENST00000587260 ATP1B4Q9UN42 357 aaPredicted RBP23.55■■□□□ 1.36
NFIX-208ENST00000587260 NUP153P49790 1475 aaKnown RBP23.55■■□□□ 1.36
NFIX-208ENST00000587260 ARID3CA6NKF2 412 aa23.52■■□□□ 1.36
NFIX-208ENST00000587260 UHRF1BP1LA0JNW5 1464 aa23.51■■□□□ 1.35
NFIX-208ENST00000587260 CDK13Q14004 1512 aaKnown RBP23.49■■□□□ 1.35
NFIX-208ENST00000587260 ZCCHC11Q5TAX3 1644 aaKnown RBP23.48■■□□□ 1.35
NFIX-208ENST00000587260 CFAP43Q8NDM7 1665 aa23.48■■□□□ 1.35
NFIX-208ENST00000587260 EPRSP07814 1512 aaKnown RBP23.47■■□□□ 1.35
NFIX-208ENST00000587260 CCDC18Q5T9S5 1454 aa23.44■■□□□ 1.34
NFIX-208ENST00000587260 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
NFIX-208ENST00000587260 KDM5BQ9UGL1 1544 aa23.42■■□□□ 1.34
NFIX-208ENST00000587260 ATP10BO94823 1461 aa23.41■■□□□ 1.34
NFIX-208ENST00000587260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.38■■□□□ 1.33
NFIX-208ENST00000587260 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
NFIX-208ENST00000587260 APLP2Q06481 763 aa23.34■■□□□ 1.33
NFIX-208ENST00000587260 MAP3K1Q13233 1512 aa23.33■■□□□ 1.33
NFIX-208ENST00000587260 MAGI3Q5TCQ9 1506 aa23.33■■□□□ 1.33
NFIX-208ENST00000587260 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
NFIX-208ENST00000587260 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
NFIX-208ENST00000587260 LRRC9Q6ZRR7 1453 aa23.27■■□□□ 1.32
NFIX-208ENST00000587260 MAPKBP1O60336 1514 aa23.27■■□□□ 1.32
NFIX-208ENST00000587260 ASXL2Q76L83 1435 aa23.26■■□□□ 1.31
NFIX-208ENST00000587260 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
NFIX-208ENST00000587260 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
NFIX-208ENST00000587260 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
NFIX-208ENST00000587260 WDR7Q9Y4E6 1490 aa23.24■■□□□ 1.31
NFIX-208ENST00000587260 KIF14Q15058 1648 aa23.24■■□□□ 1.31
NFIX-208ENST00000587260 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
NFIX-208ENST00000587260 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
NFIX-208ENST00000587260 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
NFIX-208ENST00000587260 SUPT6HQ7KZ85 1726 aaKnown RBP23.2■■□□□ 1.31
NFIX-208ENST00000587260 KCNH8Q96L42 1107 aa23.14■■□□□ 1.3
NFIX-208ENST00000587260 TTC37Q6PGP7 1564 aa23.14■■□□□ 1.29
NFIX-208ENST00000587260 DIP2BQ9P265 1576 aa23.13■■□□□ 1.29
NFIX-208ENST00000587260 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
NFIX-208ENST00000587260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.12■■□□□ 1.29
NFIX-208ENST00000587260 KIF13AQ9H1H9 1805 aa23.1■■□□□ 1.29
NFIX-208ENST00000587260 ABCA9Q8IUA7 1624 aa23.08■■□□□ 1.29
NFIX-208ENST00000587260 ABCC10Q5T3U5 1492 aa23.07■■□□□ 1.28
NFIX-208ENST00000587260 CDC42BPAQ5VT25 1732 aa23.07■■□□□ 1.28
NFIX-208ENST00000587260 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
NFIX-208ENST00000587260 ITSN2Q9NZM3 1697 aa23.05■■□□□ 1.28
NFIX-208ENST00000587260 GLI2P10070 1586 aa23.03■■□□□ 1.28
NFIX-208ENST00000587260 PREX2Q70Z35 1606 aa23.03■■□□□ 1.28
NFIX-208ENST00000587260 MAP3K4Q9Y6R4 1608 aa23.02■■□□□ 1.28
NFIX-208ENST00000587260 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
NFIX-208ENST00000587260 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
NFIX-208ENST00000587260 CDC42BPBQ9Y5S2 1711 aa23■■□□□ 1.27
NFIX-208ENST00000587260 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
NFIX-208ENST00000587260 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
NFIX-208ENST00000587260 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
NFIX-208ENST00000587260 GPATCH8Q9UKJ3 1502 aaKnown RBP22.97■■□□□ 1.27
NFIX-208ENST00000587260 MYOM3Q5VTT5 1437 aa22.97■■□□□ 1.27
NFIX-208ENST00000587260 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
NFIX-208ENST00000587260 ARHGAP5Q13017 1502 aa22.95■■□□□ 1.26
NFIX-208ENST00000587260 CD109Q6YHK3 1445 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms