RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
H3F3B-205ENST00000587171 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
H3F3B-205ENST00000587171 KIAA0586Q9BVV6 1533 aa22.72■■□□□ 1.23
H3F3B-205ENST00000587171 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
H3F3B-205ENST00000587171 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
H3F3B-205ENST00000587171 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
H3F3B-205ENST00000587171 ADCY10Q96PN6 1610 aa22.51■■□□□ 1.19
H3F3B-205ENST00000587171 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
H3F3B-205ENST00000587171 CARMIL2Q6F5E8 1435 aa22.47■■□□□ 1.19
H3F3B-205ENST00000587171 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
H3F3B-205ENST00000587171 PTPRGP23470 1445 aa22.43■■□□□ 1.18
H3F3B-205ENST00000587171 DISP1Q96F81 1524 aa22.42■■□□□ 1.18
H3F3B-205ENST00000587171 UGGT2Q9NYU1 1516 aa22.42■■□□□ 1.18
H3F3B-205ENST00000587171 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
H3F3B-205ENST00000587171 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
H3F3B-205ENST00000587171 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
H3F3B-205ENST00000587171 NPM1P06748 294 aaKnown RBP eCLIP22.4■■□□□ 1.18
H3F3B-205ENST00000587171 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
H3F3B-205ENST00000587171 KIAA0556O60303 1618 aa22.35■■□□□ 1.17
H3F3B-205ENST00000587171 DIP2BQ9P265 1576 aa22.33■■□□□ 1.17
H3F3B-205ENST00000587171 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
H3F3B-205ENST00000587171 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
H3F3B-205ENST00000587171 UHRF1BP1LA0JNW5 1464 aa22.31■■□□□ 1.16
H3F3B-205ENST00000587171 UACAQ9BZF9 1416 aa22.29■■□□□ 1.16
H3F3B-205ENST00000587171 FAM69CQ0P6D2 419 aa22.28■■□□□ 1.16
H3F3B-205ENST00000587171 EEA1Q15075 1411 aa22.24■■□□□ 1.15
H3F3B-205ENST00000587171 GOLGA3Q08378 1498 aa22.24■■□□□ 1.15
H3F3B-205ENST00000587171 CSRNP3Q8WYN3 585 aa22.24■■□□□ 1.15
H3F3B-205ENST00000587171 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
H3F3B-205ENST00000587171 ASXL2Q76L83 1435 aa22.19■■□□□ 1.14
H3F3B-205ENST00000587171 PLB1Q6P1J6 1458 aa22.19■■□□□ 1.14
H3F3B-205ENST00000587171 TSPOAP1O95153 1857 aa22.17■■□□□ 1.14
H3F3B-205ENST00000587171 ZCCHC11Q5TAX3 1644 aaKnown RBP22.17■■□□□ 1.14
H3F3B-205ENST00000587171 GLI2P10070 1586 aa22.14■■□□□ 1.13
H3F3B-205ENST00000587171 ABCA8O94911 1581 aa22.13■■□□□ 1.13
H3F3B-205ENST00000587171 SAMD9Q5K651 1589 aa22.09■■□□□ 1.13
H3F3B-205ENST00000587171 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
H3F3B-205ENST00000587171 EPRSP07814 1512 aaKnown RBP22.07■■□□□ 1.12
H3F3B-205ENST00000587171 KIF21BO75037 1637 aa22.07■■□□□ 1.12
H3F3B-205ENST00000587171 KDM6BO15054 1643 aa22.06■■□□□ 1.12
H3F3B-205ENST00000587171 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
H3F3B-205ENST00000587171 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
H3F3B-205ENST00000587171 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
H3F3B-205ENST00000587171 MAP3K4Q9Y6R4 1608 aa22.03■■□□□ 1.12
H3F3B-205ENST00000587171 P3H3Q8IVL6 736 aa22■■□□□ 1.11
H3F3B-205ENST00000587171 RAPGEF6Q8TEU7 1601 aa21.95■■□□□ 1.1
H3F3B-205ENST00000587171 TEX14Q8IWB6 1497 aa21.92■■□□□ 1.1
H3F3B-205ENST00000587171 CFAP43Q8NDM7 1665 aa21.91■■□□□ 1.1
H3F3B-205ENST00000587171 EFCAB5A4FU69 1503 aa21.91■■□□□ 1.1
H3F3B-205ENST00000587171 ATP10BO94823 1461 aa21.91■■□□□ 1.1
H3F3B-205ENST00000587171 FHOD3Q2V2M9 1422 aa21.9■■□□□ 1.1
H3F3B-205ENST00000587171 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
H3F3B-205ENST00000587171 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
H3F3B-205ENST00000587171 MAGI3Q5TCQ9 1506 aa21.85■■□□□ 1.09
H3F3B-205ENST00000587171 NUP153P49790 1475 aaKnown RBP21.85■■□□□ 1.09
H3F3B-205ENST00000587171 COL17A1Q9UMD9 1497 aaPredicted RBP21.85■■□□□ 1.09
H3F3B-205ENST00000587171 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
H3F3B-205ENST00000587171 KCNH8Q96L42 1107 aa21.85■■□□□ 1.09
H3F3B-205ENST00000587171 CD109Q6YHK3 1445 aa21.85■■□□□ 1.09
H3F3B-205ENST00000587171 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
H3F3B-205ENST00000587171 ABCA9Q8IUA7 1624 aa21.8■■□□□ 1.08
H3F3B-205ENST00000587171 EHMT2Q96KQ7 1210 aa21.78■■□□□ 1.08
H3F3B-205ENST00000587171 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
H3F3B-205ENST00000587171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
H3F3B-205ENST00000587171 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
H3F3B-205ENST00000587171 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
H3F3B-205ENST00000587171 KDM4FA0A1W2PPD8 638 aa21.68■■□□□ 1.06
H3F3B-205ENST00000587171 ARAP3Q8WWN8 1544 aa21.68■■□□□ 1.06
H3F3B-205ENST00000587171 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
H3F3B-205ENST00000587171 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
H3F3B-205ENST00000587171 HECW1Q76N89 1606 aa21.65■■□□□ 1.06
H3F3B-205ENST00000587171 PHLDB1Q86UU1 1377 aa21.64■■□□□ 1.06
H3F3B-205ENST00000587171 NEO1Q92859 1461 aa21.63■■□□□ 1.05
H3F3B-205ENST00000587171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.056e-11■■■□□ 18.3
H3F3B-205ENST00000587171 ADGRL1O94910 1474 aa21.6■■□□□ 1.05
H3F3B-205ENST00000587171 TTC37Q6PGP7 1564 aa21.58■■□□□ 1.05
H3F3B-205ENST00000587171 LRRIQ1Q96JM4 1722 aa21.56■■□□□ 1.04
H3F3B-205ENST00000587171 CFAP74Q9C0B2 1584 aa21.54■■□□□ 1.04
H3F3B-205ENST00000587171 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
H3F3B-205ENST00000587171 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
H3F3B-205ENST00000587171 FANCAO15360 1455 aa21.52■■□□□ 1.03
H3F3B-205ENST00000587171 PCF11O94913 1555 aaKnown RBP21.5■■□□□ 1.03
H3F3B-205ENST00000587171 RAPGEF3O95398 923 aa21.5■■□□□ 1.03
H3F3B-205ENST00000587171 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
H3F3B-205ENST00000587171 AKNAQ7Z591 1439 aa21.48■■□□□ 1.03
H3F3B-205ENST00000587171 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
H3F3B-205ENST00000587171 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
H3F3B-205ENST00000587171 KIF14Q15058 1648 aa21.47■■□□□ 1.03
H3F3B-205ENST00000587171 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
H3F3B-205ENST00000587171 MYO5CQ9NQX4 1742 aa21.46■■□□□ 1.03
H3F3B-205ENST00000587171 PLCH2O75038 1416 aa21.46■■□□□ 1.03
H3F3B-205ENST00000587171 CLIP1P30622 1438 aa21.46■■□□□ 1.03
H3F3B-205ENST00000587171 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.03
H3F3B-205ENST00000587171 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.02
H3F3B-205ENST00000587171 FYCO1Q9BQS8 1478 aa21.43■■□□□ 1.02
H3F3B-205ENST00000587171 ZMYM4Q5VZL5 1548 aa21.4■■□□□ 1.02
H3F3B-205ENST00000587171 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
H3F3B-205ENST00000587171 POGZQ7Z3K3 1410 aa21.35■■□□□ 1.01
H3F3B-205ENST00000587171 SCAPERQ9BY12 1400 aa21.35■■□□□ 1.01
H3F3B-205ENST00000587171 ADAMTSL3P82987 1691 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms