RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 TRHP20396 242 aaPredicted RBP8.6□□□□□ -1.03
LINC01140-208ENST00000587165 RUSC2Q8N2Y8 1516 aa8.59□□□□□ -1.03
LINC01140-208ENST00000587165 SHROOM2Q13796 1616 aa8.58□□□□□ -1.04
LINC01140-208ENST00000587165 RAPGEF2Q9Y4G8 1499 aa8.57□□□□□ -1.04
LINC01140-208ENST00000587165 CARMIL2Q6F5E8 1435 aa8.57□□□□□ -1.04
LINC01140-208ENST00000587165 NPM1P06748 294 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC01140-208ENST00000587165 ERCC6L2Q5T890 1561 aa8.55□□□□□ -1.04
LINC01140-208ENST00000587165 EEA1Q15075 1411 aa8.54□□□□□ -1.04
LINC01140-208ENST00000587165 IQGAP2Q13576 1575 aa8.53□□□□□ -1.04
LINC01140-208ENST00000587165 FAM9AQ8IZU1 332 aaPredicted RBP8.53□□□□□ -1.04
LINC01140-208ENST00000587165 TNIKQ9UKE5 1360 aa8.52□□□□□ -1.05
LINC01140-208ENST00000587165 PTPRGP23470 1445 aa8.52□□□□□ -1.05
LINC01140-208ENST00000587165 CSRNP3Q8WYN3 585 aa8.51□□□□□ -1.05
LINC01140-208ENST00000587165 TTBK1Q5TCY1 1321 aaPredicted RBP8.51□□□□□ -1.05
LINC01140-208ENST00000587165 PRXQ9BXM0 1461 aa8.5□□□□□ -1.05
LINC01140-208ENST00000587165 GOLGA3Q08378 1498 aa8.49□□□□□ -1.05
LINC01140-208ENST00000587165 UGGT2Q9NYU1 1516 aa8.48□□□□□ -1.05
LINC01140-208ENST00000587165 CHIC1Q5VXU3 224 aa8.46□□□□□ -1.06
LINC01140-208ENST00000587165 UACAQ9BZF9 1416 aa8.45□□□□□ -1.06
LINC01140-208ENST00000587165 DISP1Q96F81 1524 aa8.44□□□□□ -1.06
LINC01140-208ENST00000587165 MAPKBP1O60336 1514 aa8.44□□□□□ -1.06
LINC01140-208ENST00000587165 ABCC2Q92887 1545 aa8.44□□□□□ -1.06
LINC01140-208ENST00000587165 KIAA0556O60303 1618 aa8.43□□□□□ -1.06
LINC01140-208ENST00000587165 FAM69CQ0P6D2 419 aa8.43□□□□□ -1.06
LINC01140-208ENST00000587165 UHRF1BP1LA0JNW5 1464 aa8.43□□□□□ -1.06
LINC01140-208ENST00000587165 ADCY10Q96PN6 1610 aa8.43□□□□□ -1.06
LINC01140-208ENST00000587165 CTTNBP2Q8WZ74 1663 aa8.43□□□□□ -1.06
LINC01140-208ENST00000587165 ABCC10Q5T3U5 1492 aa8.41□□□□□ -1.06
LINC01140-208ENST00000587165 PLB1Q6P1J6 1458 aa8.41□□□□□ -1.06
LINC01140-208ENST00000587165 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
LINC01140-208ENST00000587165 KIF21BO75037 1637 aa8.39□□□□□ -1.07
LINC01140-208ENST00000587165 ASXL2Q76L83 1435 aa8.38□□□□□ -1.07
LINC01140-208ENST00000587165 RANGAP1P46060 587 aaPredicted RBP8.38□□□□□ -1.07
LINC01140-208ENST00000587165 P3H3Q8IVL6 736 aa8.37□□□□□ -1.07
LINC01140-208ENST00000587165 KDM5BQ9UGL1 1544 aa8.37□□□□□ -1.07
LINC01140-208ENST00000587165 DIP2BQ9P265 1576 aa8.36□□□□□ -1.07
LINC01140-208ENST00000587165 EHMT2Q96KQ7 1210 aa8.35□□□□□ -1.07
LINC01140-208ENST00000587165 EFCAB5A4FU69 1503 aa8.34□□□□□ -1.07
LINC01140-208ENST00000587165 WDR7Q9Y4E6 1490 aa8.34□□□□□ -1.07
LINC01140-208ENST00000587165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.34□□□□□ -1.07
LINC01140-208ENST00000587165 HNRNPUL2Q1KMD3 747 aaKnown RBP8.34□□□□□ -1.07
LINC01140-208ENST00000587165 ABCA8O94911 1581 aa8.34□□□□□ -1.07
LINC01140-208ENST00000587165 FHOD3Q2V2M9 1422 aa8.33□□□□□ -1.08
LINC01140-208ENST00000587165 SAMD9Q5K651 1589 aa8.33□□□□□ -1.08
LINC01140-208ENST00000587165 ARID3CA6NKF2 412 aa8.32□□□□□ -1.08
LINC01140-208ENST00000587165 EPRSP07814 1512 aaKnown RBP8.32□□□□□ -1.08
LINC01140-208ENST00000587165 ZCCHC11Q5TAX3 1644 aaKnown RBP8.32□□□□□ -1.08
LINC01140-208ENST00000587165 TEX14Q8IWB6 1497 aa8.32□□□□□ -1.08
LINC01140-208ENST00000587165 GLI2P10070 1586 aa8.31□□□□□ -1.08
LINC01140-208ENST00000587165 KIF13AQ9H1H9 1805 aa8.31□□□□□ -1.08
LINC01140-208ENST00000587165 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
LINC01140-208ENST00000587165 FMN1Q68DA7 1419 aa8.3□□□□□ -1.08
LINC01140-208ENST00000587165 RAPGEF6Q8TEU7 1601 aa8.29□□□□□ -1.08
LINC01140-208ENST00000587165 PLEKHD1A6NEE1 506 aa8.28□□□□□ -1.08
LINC01140-208ENST00000587165 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
LINC01140-208ENST00000587165 KDM6BO15054 1643 aa8.28□□□□□ -1.08
LINC01140-208ENST00000587165 CD109Q6YHK3 1445 aa8.28□□□□□ -1.08
LINC01140-208ENST00000587165 ATP10BO94823 1461 aa8.27□□□□□ -1.09
LINC01140-208ENST00000587165 AEBP2Q6ZN18 517 aaPredicted RBP8.27□□□□□ -1.09
LINC01140-208ENST00000587165 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.09
LINC01140-208ENST00000587165 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
LINC01140-208ENST00000587165 TSPOAP1O95153 1857 aa8.26□□□□□ -1.09
LINC01140-208ENST00000587165 ARHGAP35Q9NRY4 1499 aa8.25□□□□□ -1.09
LINC01140-208ENST00000587165 MAGI3Q5TCQ9 1506 aa8.24□□□□□ -1.09
LINC01140-208ENST00000587165 MAP3K4Q9Y6R4 1608 aa8.24□□□□□ -1.09
LINC01140-208ENST00000587165 PHLDB1Q86UU1 1377 aa8.23□□□□□ -1.09
LINC01140-208ENST00000587165 CLIP1P30622 1438 aa8.23□□□□□ -1.09
LINC01140-208ENST00000587165 HECW1Q76N89 1606 aa8.23□□□□□ -1.09
LINC01140-208ENST00000587165 CFAP43Q8NDM7 1665 aa8.23□□□□□ -1.09
LINC01140-208ENST00000587165 PPRC1Q5VV67 1664 aaKnown RBP8.2□□□□□ -1.1
LINC01140-208ENST00000587165 CASKIN1Q8WXD9 1431 aa8.2□□□□□ -1.1
LINC01140-208ENST00000587165 CCDC18Q5T9S5 1454 aa8.19□□□□□ -1.1
LINC01140-208ENST00000587165 NEO1Q92859 1461 aa8.19□□□□□ -1.1
LINC01140-208ENST00000587165 CDK13Q14004 1512 aaKnown RBP8.19□□□□□ -1.1
LINC01140-208ENST00000587165 ABCA9Q8IUA7 1624 aa8.19□□□□□ -1.1
LINC01140-208ENST00000587165 FYCO1Q9BQS8 1478 aa8.18□□□□□ -1.1
LINC01140-208ENST00000587165 TROQ12816 1431 aaPredicted RBP8.17□□□□□ -1.1
LINC01140-208ENST00000587165 ARAP3Q8WWN8 1544 aa8.17□□□□□ -1.1
LINC01140-208ENST00000587165 CEP162Q5TB80 1403 aa8.16□□□□□ -1.1
LINC01140-208ENST00000587165 COL17A1Q9UMD9 1497 aaPredicted RBP8.16□□□□□ -1.1
LINC01140-208ENST00000587165 CFAP74Q9C0B2 1584 aa8.15□□□□□ -1.1
LINC01140-208ENST00000587165 FANCAO15360 1455 aa8.15□□□□□ -1.1
LINC01140-208ENST00000587165 EFCAB2Q5VUJ9 269 aa8.15□□□□□ -1.1
LINC01140-208ENST00000587165 KIF14Q15058 1648 aa8.14□□□□□ -1.11
LINC01140-208ENST00000587165 PCF11O94913 1555 aaKnown RBP8.14□□□□□ -1.11
LINC01140-208ENST00000587165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.14□□□□□ -1.11
LINC01140-208ENST00000587165 DENND4BO75064 1496 aaPredicted RBP8.14□□□□□ -1.11
LINC01140-208ENST00000587165 AKNAQ7Z591 1439 aa8.14□□□□□ -1.11
LINC01140-208ENST00000587165 PLCH2O75038 1416 aa8.13□□□□□ -1.11
LINC01140-208ENST00000587165 RAPGEF3O95398 923 aa8.13□□□□□ -1.11
LINC01140-208ENST00000587165 TTC37Q6PGP7 1564 aa8.13□□□□□ -1.11
LINC01140-208ENST00000587165 MTUS2Q5JR59 1369 aa8.12□□□□□ -1.11
LINC01140-208ENST00000587165 ADGRL1O94910 1474 aa8.12□□□□□ -1.11
LINC01140-208ENST00000587165 ARID4BQ4LE39 1312 aaPredicted RBP8.11□□□□□ -1.11
LINC01140-208ENST00000587165 ARHGAP5Q13017 1502 aa8.11□□□□□ -1.11
LINC01140-208ENST00000587165 MYT1LQ9UL68 1186 aa8.1□□□□□ -1.11
LINC01140-208ENST00000587165 SCAPERQ9BY12 1400 aa8.1□□□□□ -1.11
LINC01140-208ENST00000587165 KDM4FA0A1W2PPD8 638 aa8.09□□□□□ -1.11
LINC01140-208ENST00000587165 LOC105371045A0A1W2PR82 267 aa8.09□□□□□ -1.11
LINC01140-208ENST00000587165 POGZQ7Z3K3 1410 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms