RNA–Protein interactions for RNA: ENST00000587087.5

CNN1-206, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-206ENST00000587087 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.31
CNN1-206ENST00000587087 TRHP20396 242 aaPredicted RBP23.26■■□□□ 1.31
CNN1-206ENST00000587087 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
CNN1-206ENST00000587087 KIAA0586Q9BVV6 1533 aa23.25■■□□□ 1.31
CNN1-206ENST00000587087 IQGAP2Q13576 1575 aa23.13■■□□□ 1.29
CNN1-206ENST00000587087 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
CNN1-206ENST00000587087 ADCY10Q96PN6 1610 aa23.03■■□□□ 1.28
CNN1-206ENST00000587087 CARMIL2Q6F5E8 1435 aa23.02■■□□□ 1.28
CNN1-206ENST00000587087 CTTNBP2Q8WZ74 1663 aa23.02■■□□□ 1.28
CNN1-206ENST00000587087 KIF13AQ9H1H9 1805 aa22.98■■□□□ 1.27
CNN1-206ENST00000587087 PTPRGP23470 1445 aa22.96■■□□□ 1.27
CNN1-206ENST00000587087 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
CNN1-206ENST00000587087 DISP1Q96F81 1524 aa22.94■■□□□ 1.26
CNN1-206ENST00000587087 PRXQ9BXM0 1461 aa22.94■■□□□ 1.26
CNN1-206ENST00000587087 TNIKQ9UKE5 1360 aa22.94■■□□□ 1.26
CNN1-206ENST00000587087 NPM1P06748 294 aaKnown RBP eCLIP22.94■■□□□ 1.26
CNN1-206ENST00000587087 MAPKBP1O60336 1514 aa22.93■■□□□ 1.26
CNN1-206ENST00000587087 KIAA0556O60303 1618 aa22.9■■□□□ 1.26
CNN1-206ENST00000587087 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
CNN1-206ENST00000587087 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
CNN1-206ENST00000587087 DIP2BQ9P265 1576 aa22.84■■□□□ 1.25
CNN1-206ENST00000587087 EEA1Q15075 1411 aa22.83■■□□□ 1.25
CNN1-206ENST00000587087 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
CNN1-206ENST00000587087 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
CNN1-206ENST00000587087 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
CNN1-206ENST00000587087 GOLGA3Q08378 1498 aa22.8■■□□□ 1.24
CNN1-206ENST00000587087 UACAQ9BZF9 1416 aa22.8■■□□□ 1.24
CNN1-206ENST00000587087 FAM69CQ0P6D2 419 aa22.77■■□□□ 1.24
CNN1-206ENST00000587087 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
CNN1-206ENST00000587087 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
CNN1-206ENST00000587087 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
CNN1-206ENST00000587087 ASXL2Q76L83 1435 aa22.7■■□□□ 1.22
CNN1-206ENST00000587087 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
CNN1-206ENST00000587087 FAM9AQ8IZU1 332 aaPredicted RBP22.67■■□□□ 1.22
CNN1-206ENST00000587087 KIF21BO75037 1637 aa22.67■■□□□ 1.22
CNN1-206ENST00000587087 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
CNN1-206ENST00000587087 ABCA8O94911 1581 aa22.65■■□□□ 1.22
CNN1-206ENST00000587087 SAMD9Q5K651 1589 aa22.65■■□□□ 1.22
CNN1-206ENST00000587087 GLI2P10070 1586 aa22.63■■□□□ 1.21
CNN1-206ENST00000587087 KDM6BO15054 1643 aa22.57■■□□□ 1.2
CNN1-206ENST00000587087 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
CNN1-206ENST00000587087 PPRC1Q5VV67 1664 aaKnown RBP22.56■■□□□ 1.2
CNN1-206ENST00000587087 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
CNN1-206ENST00000587087 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
CNN1-206ENST00000587087 MAP3K4Q9Y6R4 1608 aa22.55■■□□□ 1.2
CNN1-206ENST00000587087 RAPGEF6Q8TEU7 1601 aa22.5■■□□□ 1.19
CNN1-206ENST00000587087 EFCAB5A4FU69 1503 aa22.48■■□□□ 1.19
CNN1-206ENST00000587087 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
CNN1-206ENST00000587087 CFAP43Q8NDM7 1665 aa22.46■■□□□ 1.19
CNN1-206ENST00000587087 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
CNN1-206ENST00000587087 TEX14Q8IWB6 1497 aa22.44■■□□□ 1.18
CNN1-206ENST00000587087 ATP10BO94823 1461 aa22.43■■□□□ 1.18
CNN1-206ENST00000587087 ARID3CA6NKF2 412 aa22.4■■□□□ 1.18
CNN1-206ENST00000587087 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
CNN1-206ENST00000587087 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
CNN1-206ENST00000587087 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
CNN1-206ENST00000587087 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
CNN1-206ENST00000587087 CD109Q6YHK3 1445 aa22.35■■□□□ 1.17
CNN1-206ENST00000587087 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
CNN1-206ENST00000587087 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
CNN1-206ENST00000587087 ABCA9Q8IUA7 1624 aa22.31■■□□□ 1.16
CNN1-206ENST00000587087 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
CNN1-206ENST00000587087 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
CNN1-206ENST00000587087 COL17A1Q9UMD9 1497 aaPredicted RBP22.3■■□□□ 1.16
CNN1-206ENST00000587087 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
CNN1-206ENST00000587087 FMN1Q68DA7 1419 aa22.25■■□□□ 1.15
CNN1-206ENST00000587087 HECW1Q76N89 1606 aa22.23■■□□□ 1.15
CNN1-206ENST00000587087 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.14
CNN1-206ENST00000587087 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
CNN1-206ENST00000587087 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
CNN1-206ENST00000587087 NEO1Q92859 1461 aa22.14■■□□□ 1.13
CNN1-206ENST00000587087 PHLDB1Q86UU1 1377 aa22.13■■□□□ 1.13
CNN1-206ENST00000587087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.13■■□□□ 1.13
CNN1-206ENST00000587087 TTC37Q6PGP7 1564 aa22.12■■□□□ 1.13
CNN1-206ENST00000587087 LRRIQ1Q96JM4 1722 aa22.12■■□□□ 1.13
CNN1-206ENST00000587087 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
CNN1-206ENST00000587087 CFAP74Q9C0B2 1584 aa22.1■■□□□ 1.13
CNN1-206ENST00000587087 KDM4FA0A1W2PPD8 638 aa22.09■■□□□ 1.13
CNN1-206ENST00000587087 PCF11O94913 1555 aaKnown RBP22.08■■□□□ 1.13
CNN1-206ENST00000587087 ADGRL1O94910 1474 aa22.07■■□□□ 1.12
CNN1-206ENST00000587087 CLIP1P30622 1438 aa22.05■■□□□ 1.12
CNN1-206ENST00000587087 CDK11AQ9UQ88 783 aaPredicted RBP22.04■■□□□ 1.12
CNN1-206ENST00000587087 FANCAO15360 1455 aa22.03■■□□□ 1.12
CNN1-206ENST00000587087 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
CNN1-206ENST00000587087 KIF14Q15058 1648 aa22.03■■□□□ 1.12
CNN1-206ENST00000587087 CASKIN1Q8WXD9 1431 aa22.03■■□□□ 1.12
CNN1-206ENST00000587087 FRMPD1Q5SYB0 1578 aa22.03■■□□□ 1.12
CNN1-206ENST00000587087 CCDC18Q5T9S5 1454 aa22.01■■□□□ 1.11
CNN1-206ENST00000587087 RICTORQ6R327 1708 aa22■■□□□ 1.11
CNN1-206ENST00000587087 TROQ12816 1431 aaPredicted RBP21.99■■□□□ 1.11
CNN1-206ENST00000587087 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
CNN1-206ENST00000587087 FYCO1Q9BQS8 1478 aa21.99■■□□□ 1.11
CNN1-206ENST00000587087 RAPGEF3O95398 923 aa21.99■■□□□ 1.11
CNN1-206ENST00000587087 PLCH2O75038 1416 aa21.97■■□□□ 1.11
CNN1-206ENST00000587087 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
CNN1-206ENST00000587087 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
CNN1-206ENST00000587087 ZMYM4Q5VZL5 1548 aa21.9■■□□□ 1.1
CNN1-206ENST00000587087 CDC42BPBQ9Y5S2 1711 aa21.89■■□□□ 1.09
CNN1-206ENST00000587087 ARHGAP5Q13017 1502 aa21.88■■□□□ 1.09
CNN1-206ENST00000587087 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms