RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
VAT1-203ENST00000587062 KIAA0586Q9BVV6 1533 aa34.28■■■■□ 3.08
VAT1-203ENST00000587062 ERCC6L2Q5T890 1561 aa34.23■■■■□ 3.07
VAT1-203ENST00000587062 TRHP20396 242 aaPredicted RBP34.22■■■■□ 3.07
VAT1-203ENST00000587062 RAPGEF2Q9Y4G8 1499 aa34.16■■■■□ 3.06
VAT1-203ENST00000587062 CARMIL2Q6F5E8 1435 aa34.04■■■■□ 3.04
VAT1-203ENST00000587062 IQGAP2Q13576 1575 aa34.02■■■■□ 3.04
VAT1-203ENST00000587062 NPM1P06748 294 aaKnown RBP eCLIP33.98■■■■□ 3.03
VAT1-203ENST00000587062 EEA1Q15075 1411 aa33.91■■■■□ 3.02
VAT1-203ENST00000587062 CSRNP3Q8WYN3 585 aa33.91■■■■□ 3.02
VAT1-203ENST00000587062 PRXQ9BXM0 1461 aa33.88■■■■□ 3.01
VAT1-203ENST00000587062 PTPRGP23470 1445 aa33.88■■■■□ 3.01
VAT1-203ENST00000587062 TNIKQ9UKE5 1360 aa33.87■■■■□ 3.01
VAT1-203ENST00000587062 TTBK1Q5TCY1 1321 aaPredicted RBP33.82■■■■□ 3.01
VAT1-203ENST00000587062 CTTNBP2Q8WZ74 1663 aa33.8■■■■□ 3
VAT1-203ENST00000587062 UGGT2Q9NYU1 1516 aa33.8■■■■□ 3
VAT1-203ENST00000587062 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
VAT1-203ENST00000587062 DISP1Q96F81 1524 aa33.73■■■□□ 2.99
VAT1-203ENST00000587062 GOLGA3Q08378 1498 aa33.72■■■□□ 2.99
VAT1-203ENST00000587062 FAM9AQ8IZU1 332 aaPredicted RBP33.72■■■□□ 2.99
VAT1-203ENST00000587062 ADCY10Q96PN6 1610 aa33.71■■■□□ 2.99
VAT1-203ENST00000587062 KIAA0556O60303 1618 aa33.66■■■□□ 2.98
VAT1-203ENST00000587062 MAPKBP1O60336 1514 aa33.63■■■□□ 2.97
VAT1-203ENST00000587062 UACAQ9BZF9 1416 aa33.62■■■□□ 2.97
VAT1-203ENST00000587062 UHRF1BP1LA0JNW5 1464 aa33.58■■■□□ 2.97
VAT1-203ENST00000587062 ABCC2Q92887 1545 aa33.57■■■□□ 2.96
VAT1-203ENST00000587062 FAM69CQ0P6D2 419 aa33.56■■■□□ 2.96
VAT1-203ENST00000587062 ABCC10Q5T3U5 1492 aa33.53■■■□□ 2.96
VAT1-203ENST00000587062 KIF13AQ9H1H9 1805 aa33.49■■■□□ 2.95
VAT1-203ENST00000587062 KIF21BO75037 1637 aa33.46■■■□□ 2.95
VAT1-203ENST00000587062 PLB1Q6P1J6 1458 aa33.44■■■□□ 2.94
VAT1-203ENST00000587062 DIP2BQ9P265 1576 aa33.41■■■□□ 2.94
VAT1-203ENST00000587062 KDM5BQ9UGL1 1544 aa33.4■■■□□ 2.94
VAT1-203ENST00000587062 P3H3Q8IVL6 736 aa33.4■■■□□ 2.94
VAT1-203ENST00000587062 ASXL2Q76L83 1435 aa33.38■■■□□ 2.93
VAT1-203ENST00000587062 UBTFP17480 764 aaKnown RBP33.36■■■□□ 2.93
VAT1-203ENST00000587062 RANGAP1P46060 587 aaPredicted RBP33.34■■■□□ 2.93
VAT1-203ENST00000587062 SAMD9Q5K651 1589 aa33.31■■■□□ 2.92
VAT1-203ENST00000587062 ZCCHC11Q5TAX3 1644 aaKnown RBP33.31■■■□□ 2.92
VAT1-203ENST00000587062 ABCA8O94911 1581 aa33.3■■■□□ 2.92
VAT1-203ENST00000587062 EHMT2Q96KQ7 1210 aa33.25■■■□□ 2.91
VAT1-203ENST00000587062 GLI2P10070 1586 aa33.22■■■□□ 2.91
VAT1-203ENST00000587062 EFCAB5A4FU69 1503 aa33.2■■■□□ 2.91
VAT1-203ENST00000587062 TSPOAP1O95153 1857 aa33.18■■■□□ 2.9
VAT1-203ENST00000587062 WDR7Q9Y4E6 1490 aa33.17■■■□□ 2.9
VAT1-203ENST00000587062 EPRSP07814 1512 aaKnown RBP33.17■■■□□ 2.9
VAT1-203ENST00000587062 RAPGEF6Q8TEU7 1601 aa33.12■■■□□ 2.89
VAT1-203ENST00000587062 FHOD3Q2V2M9 1422 aa33.11■■■□□ 2.89
VAT1-203ENST00000587062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.11■■■□□ 2.89
VAT1-203ENST00000587062 HNRNPUL2Q1KMD3 747 aaKnown RBP33.11■■■□□ 2.89
VAT1-203ENST00000587062 KCNH8Q96L42 1107 aa33.09■■■□□ 2.89
VAT1-203ENST00000587062 ARID3CA6NKF2 412 aa33.07■■■□□ 2.88
VAT1-203ENST00000587062 ATP10BO94823 1461 aa33.05■■■□□ 2.88
VAT1-203ENST00000587062 KDM6BO15054 1643 aa33.04■■■□□ 2.88
VAT1-203ENST00000587062 TEX14Q8IWB6 1497 aa33.04■■■□□ 2.88
VAT1-203ENST00000587062 MAP3K4Q9Y6R4 1608 aa33.01■■■□□ 2.87
VAT1-203ENST00000587062 FMN1Q68DA7 1419 aa32.96■■■□□ 2.87
VAT1-203ENST00000587062 CD109Q6YHK3 1445 aa32.95■■■□□ 2.87
VAT1-203ENST00000587062 CFAP43Q8NDM7 1665 aa32.94■■■□□ 2.86
VAT1-203ENST00000587062 NUP153P49790 1475 aaKnown RBP32.93■■■□□ 2.86
VAT1-203ENST00000587062 PLEKHD1A6NEE1 506 aa32.93■■■□□ 2.86
VAT1-203ENST00000587062 PPRC1Q5VV67 1664 aaKnown RBP32.92■■■□□ 2.86
VAT1-203ENST00000587062 ARHGAP35Q9NRY4 1499 aa32.9■■■□□ 2.86
VAT1-203ENST00000587062 ATP1B4Q9UN42 357 aaPredicted RBP32.88■■■□□ 2.85
VAT1-203ENST00000587062 MAGI3Q5TCQ9 1506 aa32.86■■■□□ 2.85
VAT1-203ENST00000587062 AEBP2Q6ZN18 517 aaPredicted RBP32.81■■■□□ 2.84
VAT1-203ENST00000587062 CDK11AQ9UQ88 783 aaPredicted RBP32.79■■■□□ 2.84
VAT1-203ENST00000587062 HECW1Q76N89 1606 aa32.77■■■□□ 2.84
VAT1-203ENST00000587062 ABCA9Q8IUA7 1624 aa32.76■■■□□ 2.83
VAT1-203ENST00000587062 PHLDB1Q86UU1 1377 aa32.72■■■□□ 2.83
VAT1-203ENST00000587062 CLIP1P30622 1438 aa32.68■■■□□ 2.82
VAT1-203ENST00000587062 COL17A1Q9UMD9 1497 aaPredicted RBP32.66■■■□□ 2.82
VAT1-203ENST00000587062 CDK13Q14004 1512 aaKnown RBP32.66■■■□□ 2.82
VAT1-203ENST00000587062 NEO1Q92859 1461 aa32.6■■■□□ 2.81
VAT1-203ENST00000587062 CASKIN1Q8WXD9 1431 aa32.59■■■□□ 2.81
VAT1-203ENST00000587062 ARAP3Q8WWN8 1544 aa32.58■■■□□ 2.81
VAT1-203ENST00000587062 CCDC18Q5T9S5 1454 aa32.55■■■□□ 2.8
VAT1-203ENST00000587062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.54■■■□□ 2.81e-6■□□□□ 11.3
VAT1-203ENST00000587062 PCF11O94913 1555 aaKnown RBP32.49■■■□□ 2.79
VAT1-203ENST00000587062 CFAP74Q9C0B2 1584 aa32.49■■■□□ 2.79
VAT1-203ENST00000587062 FYCO1Q9BQS8 1478 aa32.49■■■□□ 2.79
VAT1-203ENST00000587062 TROQ12816 1431 aaPredicted RBP32.49■■■□□ 2.79
VAT1-203ENST00000587062 FANCAO15360 1455 aa32.46■■■□□ 2.79
VAT1-203ENST00000587062 TTC37Q6PGP7 1564 aa32.45■■■□□ 2.78
VAT1-203ENST00000587062 KIF14Q15058 1648 aa32.44■■■□□ 2.78
VAT1-203ENST00000587062 AKNAQ7Z591 1439 aa32.43■■■□□ 2.78
VAT1-203ENST00000587062 CEP162Q5TB80 1403 aa32.43■■■□□ 2.78
VAT1-203ENST00000587062 PLCH2O75038 1416 aa32.42■■■□□ 2.78
VAT1-203ENST00000587062 RAPGEF3O95398 923 aa32.41■■■□□ 2.78
VAT1-203ENST00000587062 LRRIQ1Q96JM4 1722 aa32.4■■■□□ 2.78
VAT1-203ENST00000587062 EFCAB2Q5VUJ9 269 aa32.4■■■□□ 2.78
VAT1-203ENST00000587062 DENND4BO75064 1496 aaPredicted RBP32.38■■■□□ 2.77
VAT1-203ENST00000587062 KDM4FA0A1W2PPD8 638 aa32.36■■■□□ 2.77
VAT1-203ENST00000587062 MYO5CQ9NQX4 1742 aa32.36■■■□□ 2.77
VAT1-203ENST00000587062 LOC105371045A0A1W2PR82 267 aa32.35■■■□□ 2.77
VAT1-203ENST00000587062 ADGRL1O94910 1474 aa32.29■■■□□ 2.76
VAT1-203ENST00000587062 ARHGAP5Q13017 1502 aa32.26■■■□□ 2.76
VAT1-203ENST00000587062 SCAPERQ9BY12 1400 aa32.26■■■□□ 2.75
VAT1-203ENST00000587062 MTUS2Q5JR59 1369 aa32.22■■■□□ 2.75
VAT1-203ENST00000587062 RICTORQ6R327 1708 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms