RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
SMARCA4-210ENST00000586892 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
SMARCA4-210ENST00000586892 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
SMARCA4-210ENST00000586892 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
SMARCA4-210ENST00000586892 EEA1Q15075 1411 aa22.33■■□□□ 1.17
SMARCA4-210ENST00000586892 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
SMARCA4-210ENST00000586892 PRXQ9BXM0 1461 aa22.33■■□□□ 1.16
SMARCA4-210ENST00000586892 IQGAP2Q13576 1575 aa22.33■■□□□ 1.16
SMARCA4-210ENST00000586892 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.16
SMARCA4-210ENST00000586892 CTTNBP2Q8WZ74 1663 aa22.25■■□□□ 1.15
SMARCA4-210ENST00000586892 CARMIL2Q6F5E8 1435 aa22.22■■□□□ 1.15
SMARCA4-210ENST00000586892 UGGT2Q9NYU1 1516 aa22.2■■□□□ 1.14
SMARCA4-210ENST00000586892 DISP1Q96F81 1524 aa22.16■■□□□ 1.14
SMARCA4-210ENST00000586892 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.13
SMARCA4-210ENST00000586892 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
SMARCA4-210ENST00000586892 PTPRGP23470 1445 aa22.12■■□□□ 1.13
SMARCA4-210ENST00000586892 KIAA0556O60303 1618 aa22.11■■□□□ 1.13
SMARCA4-210ENST00000586892 KIF21BO75037 1637 aa22.1■■□□□ 1.13
SMARCA4-210ENST00000586892 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
SMARCA4-210ENST00000586892 ADCY10Q96PN6 1610 aa22.08■■□□□ 1.13
SMARCA4-210ENST00000586892 GOLGA3Q08378 1498 aa22.08■■□□□ 1.12
SMARCA4-210ENST00000586892 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
SMARCA4-210ENST00000586892 NPM1P06748 294 aaKnown RBP eCLIP22.01■■□□□ 1.11
SMARCA4-210ENST00000586892 UHRF1BP1LA0JNW5 1464 aa21.98■■□□□ 1.11
SMARCA4-210ENST00000586892 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
SMARCA4-210ENST00000586892 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
SMARCA4-210ENST00000586892 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
SMARCA4-210ENST00000586892 SAMD9Q5K651 1589 aa21.95■■□□□ 1.1
SMARCA4-210ENST00000586892 KIF13AQ9H1H9 1805 aa21.88■■□□□ 1.09
SMARCA4-210ENST00000586892 UBTFP17480 764 aaKnown RBP21.87■■□□□ 1.09
SMARCA4-210ENST00000586892 PLB1Q6P1J6 1458 aa21.87■■□□□ 1.09
SMARCA4-210ENST00000586892 ABCA8O94911 1581 aa21.87■■□□□ 1.09
SMARCA4-210ENST00000586892 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
SMARCA4-210ENST00000586892 ABCC10Q5T3U5 1492 aa21.86■■□□□ 1.09
SMARCA4-210ENST00000586892 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
SMARCA4-210ENST00000586892 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
SMARCA4-210ENST00000586892 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
SMARCA4-210ENST00000586892 DIP2BQ9P265 1576 aa21.83■■□□□ 1.09
SMARCA4-210ENST00000586892 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.08
SMARCA4-210ENST00000586892 RANGAP1P46060 587 aaPredicted RBP21.82■■□□□ 1.08
SMARCA4-210ENST00000586892 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
SMARCA4-210ENST00000586892 FAM69CQ0P6D2 419 aa21.78■■□□□ 1.08
SMARCA4-210ENST00000586892 FHOD3Q2V2M9 1422 aa21.78■■□□□ 1.08
SMARCA4-210ENST00000586892 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
SMARCA4-210ENST00000586892 GLI2P10070 1586 aa21.7■■□□□ 1.06
SMARCA4-210ENST00000586892 WDR7Q9Y4E6 1490 aa21.7■■□□□ 1.06
SMARCA4-210ENST00000586892 ARHGAP35Q9NRY4 1499 aa21.69■■□□□ 1.06
SMARCA4-210ENST00000586892 EPRSP07814 1512 aaKnown RBP21.68■■□□□ 1.06
SMARCA4-210ENST00000586892 ATP10BO94823 1461 aa21.67■■□□□ 1.06
SMARCA4-210ENST00000586892 NUP153P49790 1475 aaKnown RBP21.64■■□□□ 1.06
SMARCA4-210ENST00000586892 TSPOAP1O95153 1857 aa21.64■■□□□ 1.06
SMARCA4-210ENST00000586892 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
SMARCA4-210ENST00000586892 ARID3CA6NKF2 412 aa21.61■■□□□ 1.05
SMARCA4-210ENST00000586892 MAP3K4Q9Y6R4 1608 aa21.61■■□□□ 1.05
SMARCA4-210ENST00000586892 PPRC1Q5VV67 1664 aaKnown RBP21.56■■□□□ 1.04
SMARCA4-210ENST00000586892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
SMARCA4-210ENST00000586892 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
SMARCA4-210ENST00000586892 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
SMARCA4-210ENST00000586892 CFAP43Q8NDM7 1665 aa21.55■■□□□ 1.04
SMARCA4-210ENST00000586892 HECW1Q76N89 1606 aa21.55■■□□□ 1.04
SMARCA4-210ENST00000586892 CLIP1P30622 1438 aa21.55■■□□□ 1.04
SMARCA4-210ENST00000586892 TEX14Q8IWB6 1497 aa21.52■■□□□ 1.03
SMARCA4-210ENST00000586892 KDM6BO15054 1643 aa21.5■■□□□ 1.03
SMARCA4-210ENST00000586892 CD109Q6YHK3 1445 aa21.49■■□□□ 1.03
SMARCA4-210ENST00000586892 CDK13Q14004 1512 aaKnown RBP21.48■■□□□ 1.03
SMARCA4-210ENST00000586892 ABCA9Q8IUA7 1624 aa21.47■■□□□ 1.03
SMARCA4-210ENST00000586892 MAGI3Q5TCQ9 1506 aa21.47■■□□□ 1.03
SMARCA4-210ENST00000586892 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
SMARCA4-210ENST00000586892 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
SMARCA4-210ENST00000586892 CASKIN1Q8WXD9 1431 aa21.45■■□□□ 1.02
SMARCA4-210ENST00000586892 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
SMARCA4-210ENST00000586892 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
SMARCA4-210ENST00000586892 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
SMARCA4-210ENST00000586892 FYCO1Q9BQS8 1478 aa21.41■■□□□ 1.02
SMARCA4-210ENST00000586892 CDK11AQ9UQ88 783 aaPredicted RBP21.4■■□□□ 1.02
SMARCA4-210ENST00000586892 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.02
SMARCA4-210ENST00000586892 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.01
SMARCA4-210ENST00000586892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■■■□ 23.9
SMARCA4-210ENST00000586892 COL17A1Q9UMD9 1497 aaPredicted RBP21.33■■□□□ 1.01
SMARCA4-210ENST00000586892 TTC37Q6PGP7 1564 aa21.32■■□□□ 1
SMARCA4-210ENST00000586892 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
SMARCA4-210ENST00000586892 PHLDB1Q86UU1 1377 aa21.32■■□□□ 1
SMARCA4-210ENST00000586892 NEO1Q92859 1461 aa21.31■■□□□ 1
SMARCA4-210ENST00000586892 KIF14Q15058 1648 aa21.3■■□□□ 1
SMARCA4-210ENST00000586892 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
SMARCA4-210ENST00000586892 CFAP74Q9C0B2 1584 aa21.27■■□□□ 1
SMARCA4-210ENST00000586892 MYO5CQ9NQX4 1742 aa21.24■□□□□ 0.99
SMARCA4-210ENST00000586892 FANCAO15360 1455 aa21.24■□□□□ 0.99
SMARCA4-210ENST00000586892 PLCH2O75038 1416 aa21.22■□□□□ 0.99
SMARCA4-210ENST00000586892 AKNAQ7Z591 1439 aa21.19■□□□□ 0.98
SMARCA4-210ENST00000586892 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
SMARCA4-210ENST00000586892 MTUS2Q5JR59 1369 aa21.14■□□□□ 0.98
SMARCA4-210ENST00000586892 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.97
SMARCA4-210ENST00000586892 PREX2Q70Z35 1606 aa21.14■□□□□ 0.97
SMARCA4-210ENST00000586892 FRMPD1Q5SYB0 1578 aa21.14■□□□□ 0.97
SMARCA4-210ENST00000586892 DENND4BO75064 1496 aaPredicted RBP21.13■□□□□ 0.97
SMARCA4-210ENST00000586892 RAPGEF3O95398 923 aa21.13■□□□□ 0.97
SMARCA4-210ENST00000586892 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
SMARCA4-210ENST00000586892 RICTORQ6R327 1708 aa21.12■□□□□ 0.97
SMARCA4-210ENST00000586892 CDC42BPBQ9Y5S2 1711 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms