RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 SHROOM2Q13796 1616 aa22.84■■□□□ 1.25
TMED1-202ENST00000586835 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
TMED1-202ENST00000586835 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
TMED1-202ENST00000586835 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
TMED1-202ENST00000586835 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
TMED1-202ENST00000586835 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
TMED1-202ENST00000586835 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
TMED1-202ENST00000586835 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
TMED1-202ENST00000586835 KIF21BO75037 1637 aa22.71■■□□□ 1.23
TMED1-202ENST00000586835 PRXQ9BXM0 1461 aa22.66■■□□□ 1.22
TMED1-202ENST00000586835 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
TMED1-202ENST00000586835 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
TMED1-202ENST00000586835 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
TMED1-202ENST00000586835 LOC105371045A0A1W2PR82 267 aa22.57■■□□□ 1.2
TMED1-202ENST00000586835 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
TMED1-202ENST00000586835 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
TMED1-202ENST00000586835 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.2
TMED1-202ENST00000586835 UGGT2Q9NYU1 1516 aa22.5■■□□□ 1.19
TMED1-202ENST00000586835 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
TMED1-202ENST00000586835 DISP1Q96F81 1524 aa22.47■■□□□ 1.19
TMED1-202ENST00000586835 PTPRGP23470 1445 aa22.46■■□□□ 1.19
TMED1-202ENST00000586835 KIAA0556O60303 1618 aa22.39■■□□□ 1.18
TMED1-202ENST00000586835 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.18
TMED1-202ENST00000586835 UBTFP17480 764 aaKnown RBP22.39■■□□□ 1.17
TMED1-202ENST00000586835 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
TMED1-202ENST00000586835 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
TMED1-202ENST00000586835 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
TMED1-202ENST00000586835 UHRF1BP1LA0JNW5 1464 aa22.29■■□□□ 1.16
TMED1-202ENST00000586835 MAPKBP1O60336 1514 aa22.28■■□□□ 1.16
TMED1-202ENST00000586835 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
TMED1-202ENST00000586835 ABCC2Q92887 1545 aa22.26■■□□□ 1.15
TMED1-202ENST00000586835 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
TMED1-202ENST00000586835 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
TMED1-202ENST00000586835 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
TMED1-202ENST00000586835 ABCC10Q5T3U5 1492 aa22.2■■□□□ 1.14
TMED1-202ENST00000586835 CLIP1P30622 1438 aa22.19■■□□□ 1.14
TMED1-202ENST00000586835 PLB1Q6P1J6 1458 aa22.19■■□□□ 1.14
TMED1-202ENST00000586835 KIF13AQ9H1H9 1805 aa22.19■■□□□ 1.14
TMED1-202ENST00000586835 KDM5BQ9UGL1 1544 aa22.18■■□□□ 1.14
TMED1-202ENST00000586835 ABCA8O94911 1581 aa22.16■■□□□ 1.14
TMED1-202ENST00000586835 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
TMED1-202ENST00000586835 FAM69CQ0P6D2 419 aa22.16■■□□□ 1.14
TMED1-202ENST00000586835 DIP2BQ9P265 1576 aa22.14■■□□□ 1.13
TMED1-202ENST00000586835 ASXL2Q76L83 1435 aa22.14■■□□□ 1.13
TMED1-202ENST00000586835 EFCAB5A4FU69 1503 aa22.12■■□□□ 1.13
TMED1-202ENST00000586835 ZCCHC11Q5TAX3 1644 aaKnown RBP22.11■■□□□ 1.13
TMED1-202ENST00000586835 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
TMED1-202ENST00000586835 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
TMED1-202ENST00000586835 GLI2P10070 1586 aa22.02■■□□□ 1.12
TMED1-202ENST00000586835 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.11
TMED1-202ENST00000586835 EPRSP07814 1512 aaKnown RBP22.01■■□□□ 1.11
TMED1-202ENST00000586835 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
TMED1-202ENST00000586835 ATP10BO94823 1461 aa22■■□□□ 1.11
TMED1-202ENST00000586835 WDR7Q9Y4E6 1490 aa22■■□□□ 1.11
TMED1-202ENST00000586835 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
TMED1-202ENST00000586835 NUP153P49790 1475 aaKnown RBP21.95■■□□□ 1.1
TMED1-202ENST00000586835 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
TMED1-202ENST00000586835 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
TMED1-202ENST00000586835 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
TMED1-202ENST00000586835 FMN1Q68DA7 1419 aa21.89■■□□□ 1.1
TMED1-202ENST00000586835 PPRC1Q5VV67 1664 aaKnown RBP21.88■■□□□ 1.09
TMED1-202ENST00000586835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
TMED1-202ENST00000586835 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
TMED1-202ENST00000586835 CFAP43Q8NDM7 1665 aa21.82■■□□□ 1.08
TMED1-202ENST00000586835 CD109Q6YHK3 1445 aa21.81■■□□□ 1.08
TMED1-202ENST00000586835 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
TMED1-202ENST00000586835 KDM6BO15054 1643 aa21.8■■□□□ 1.08
TMED1-202ENST00000586835 TEX14Q8IWB6 1497 aa21.8■■□□□ 1.08
TMED1-202ENST00000586835 PLEKHD1A6NEE1 506 aa21.8■■□□□ 1.08
TMED1-202ENST00000586835 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
TMED1-202ENST00000586835 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
TMED1-202ENST00000586835 HECW1Q76N89 1606 aa21.78■■□□□ 1.08
TMED1-202ENST00000586835 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
TMED1-202ENST00000586835 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
TMED1-202ENST00000586835 CDK13Q14004 1512 aaKnown RBP21.77■■□□□ 1.08
TMED1-202ENST00000586835 ABCA9Q8IUA7 1624 aa21.76■■□□□ 1.07
TMED1-202ENST00000586835 APLP2Q06481 763 aa21.73■■□□□ 1.07
TMED1-202ENST00000586835 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
TMED1-202ENST00000586835 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
TMED1-202ENST00000586835 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
TMED1-202ENST00000586835 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
TMED1-202ENST00000586835 TIAM1Q13009 1591 aa21.65■■□□□ 1.06
TMED1-202ENST00000586835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
TMED1-202ENST00000586835 CCDC18Q5T9S5 1454 aa21.64■■□□□ 1.06
TMED1-202ENST00000586835 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
TMED1-202ENST00000586835 ILDR1Q86SU0 546 aaPredicted RBP21.62■■□□□ 1.05
TMED1-202ENST00000586835 TROQ12816 1431 aaPredicted RBP21.61■■□□□ 1.05
TMED1-202ENST00000586835 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
TMED1-202ENST00000586835 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
TMED1-202ENST00000586835 NEO1Q92859 1461 aa21.6■■□□□ 1.05
TMED1-202ENST00000586835 KIF14Q15058 1648 aa21.55■■□□□ 1.04
TMED1-202ENST00000586835 LRRC9Q6ZRR7 1453 aa21.54■■□□□ 1.04
TMED1-202ENST00000586835 PLCH2O75038 1416 aa21.54■■□□□ 1.04
TMED1-202ENST00000586835 FANCAO15360 1455 aa21.53■■□□□ 1.04
TMED1-202ENST00000586835 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
TMED1-202ENST00000586835 AKNAQ7Z591 1439 aa21.51■■□□□ 1.03
TMED1-202ENST00000586835 CFAP74Q9C0B2 1584 aa21.49■■□□□ 1.03
TMED1-202ENST00000586835 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
TMED1-202ENST00000586835 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
TMED1-202ENST00000586835 KANK4Q5T7N3 995 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms